Salmo trutta (river trout): 115153480
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Entry
115153480 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115153480
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115153480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115153480
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115153480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
115153480
NCBI-ProteinID:
XP_029554820
Ensembl:
ENSSTUG00000051105
LinkDB
All DBs
Position
18:complement(51043371..51048195)
Genome browser
AA seq
214 aa
AA seq
DB search
MCEQLRGRGAKMSYGRPPPDVEGMSSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDR
YTKESRGFAFVRFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGSGPP
RRHGGYGRRSRSRSASPRRRRRSRSRSRNRSRGRDYSRSRSRSYSRSRSKSRTPRKSKSP
SRSRSRSRSPASNRGSRSRSKSMPKSPDDNGTES
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagcagctgagaggacggggagcaaagatgagctacggaaggcctccgcccgat
gtcgagggtatgtcctcgctcaaagtggacaatctcacgtaccggacctcgcctgagacc
ctacgccgagttttcgagaagtatggccgggtgggagacgtgtacatcccccgcgatcga
tacaccaaggagagccgcggtttcgcctttgtgcggttccacgataagcgcgacgctgaa
gacgcgatggacgccatggacggggccttgctcgatgggcgggaactgcgagtgcagatg
gcgcgatatggccgtccaccagactcccacttcgggcgccgaggcggcagtggaccccca
aggaggcatggaggctacgggcgcaggagcaggagtcgttcggccagcccccgccggcgt
agacgcagtcgttcccggagcaggaaccgcagtcgtggccgtgactacagccgctcgcgg
tctcgttcctactctagatcccgttccaagtcccgcacaccccgcaagagcaagtcccca
tcccgatcaaggtcccgcagccgctccccggcttctaacagaggctcaaggtcgaggtcc
aagagcatgcccaaatcccccgatgacaacggaaccgagtcttag
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