Salmo trutta (river trout): 115153527
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Entry
115153527 CDS
T08542
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115153527
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115153527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Attacin_C
LTI65_LTI78_N
Motif
Other DBs
NCBI-GeneID:
115153527
NCBI-ProteinID:
XP_029554913
Ensembl:
ENSSTUG00000006964
LinkDB
All DBs
Position
18:complement(54218277..54244083)
Genome browser
AA seq
501 aa
AA seq
DB search
MNDKYHRAARDGYLDLLREATRKELNAPDEDGMTPTLWAAYHGNLDALRVIVGRGGDQDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANVWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVSKLKDRAFRMAERRIKDCVKMQQKHHQRMERKFLKESVASDNSDAMSF
TSYNSSSTLNRKLPQFNTLTSNMPYSQATLHSTAKGRTKIQKKLEKKKQVDGTFKIYEDG
RKSVRSLSGLQLGQDVMFLKQGTYANSKDRSRLNIRDMFPHHGNNHDHHDDDHDDYDDDR
ADTISHISRAISDPGLHEAAYSEISADSGRDSLFTRPGLGTMVFRRNYVSGGLFGIGARD
KGSVAGSEPVGRAPNVRLRGHLQRRQPSLDDAIEIDSIGSALSLQERHLQELPWEEADLG
LDEELEPENGPLETFLASQSLGDFMPIFRKEKIDLEALLLCSDQDLTSIHIPLGPRKKLL
EACKRRLDTLEEPEGIEDTDL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagtaccaccgggcggcccgggatggctacctggacctactcagagaggcc
actcggaaggagctgaatgcgcctgatgaagatggaatgacaccgactttatgggctgcg
taccacggcaaccttgacgcgctccgggttattgtgggaagaggaggtgaccaggacaag
tgtgatatctgggggaacactccgctccacctggccgccgccaacggccaccacaactgc
ctatccttcctggtgtcgttcggagccaacgtgtggtgcctggacaatgactaccacacg
cccctcgacatggccgccaccaagagccacatggactgtgtccggtacctggactccatc
gccgccaagcagtcggccctcaaccccaagctggtgagcaagctgaaagacagagcattc
cgcatggcggagaggaggataaaggactgtgtgaagatgcagcagaaacaccaccagcgg
atggagaggaagttcctgaaggagagtgtagcgtcggataactccgatgccatgagcttc
actagttataacagcagcagcacgctaaaccgcaaacttcctcagttcaacactctcact
tccaatatgccatactcacaggccactcttcactccacagccaagggtaggaccaagatt
cagaagaagctagagaagaagaaacaggtggacggcaccttcaagatctacgaggatggg
aggaagagtgtacgctcgctgtctggccttcagcttggccaggacgtcatgttcctcaag
cagggcacctatgccaactccaaggaccgctcgcgtctcaacatccgggacatgttccct
caccacggcaacaaccacgatcaccatgacgatgaccatgacgattatgacgacgaccgt
gcggacaccatctcccacatctcccgtgccataagcgacccgggccttcacgaggcagcc
tactctgagatcagcgccgactcaggccgcgactctttgttcacccggccaggtctcgga
accatggtgttccgacggaactacgtatccggcggtctcttcggcatcggagcccgggac
aagggttctgtggctggcagtgaacccgtaggccgggcccctaacgttcgtctccgtggc
cacctccaacgtcgccaacccagcctggacgatgcaatagagatagacagcatcggcagt
gccctgagcctccaggagaggcacctacaggagctgccctgggaggaggctgatttgggc
ctggatgaggagctggagcctgagaacggaccactggagaccttcctggcctcccagagc
ctgggggatttcatgcccatcttcaggaaggagaaaatcgacctggaggccctactgctc
tgctcggaccaggacctgacctccatacacatccccctgggacccaggaagaagctacta
gaggcctgtaagagacggttggacaccctggaggaaccagagggcatcgaggacactgat
ctctga
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