Salmo trutta (river trout): 115153585
Help
Entry
115153585 CDS
T08542
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115153585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115153585
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115153585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Retinal
Motif
Other DBs
NCBI-GeneID:
115153585
NCBI-ProteinID:
XP_029555047
Ensembl:
ENSSTUG00000034462
LinkDB
All DBs
Position
18:complement(57794632..57801210)
Genome browser
AA seq
563 aa
AA seq
DB search
MASDDIALLAEALSKTHLGYGELSYKGQGLKLDNTESVKELVREIEEYQGLRALRLEGNT
VGVEAAQAIAKALECKDQLQSCHWSDMFTGRLRSEIPTALRSLGSALMTAGARLRELDLS
DNAFGPDGVKGIETLLKSSVCHSLQELRLNNCGMGIGGGKILAAALTECHEQSSALGAPL
KLKVFIAGRNRLENEGATALALAFQLMGSLEEVHMPQNGINHAGVTALATALQHNPHLRI
LNLNDNTFTKRGALAMAQALRHLRTVQVINFGDCLVRSEGAIALSAVLREGLPTLKELNL
SFGEITEAAALVLAQAVQDKPHMEKLDLNGNCLGEEGCEALKETMDNMDRADILASLSDD
EGEPDEEEEEEEEEEEDENGKEMTENGVKDRDSPVKPEPTCHPEILSFLSSPTAETLLKL
GDNRTGLIQQHVDVSDSDKVADAFLRISSLYSDDHEVKKAVLETIDTLLKKAFSGSSLQT
YSFLSTLLVMLGLLKGEGKVKKVQVLPGHLLVLEHAVQQDYFPQDHASLLDTFVARHGKS
LKSCSHARDSLKSTLERRISPEC
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatgacattgccctgctggccgaagcgctgtccaagactcatctaggatat
ggagagttgagctacaagggccagggactgaagctggacaacacagagtctgtgaaggag
ttggtgcgggaaatagaggagtaccagggactccgggccctgcggttggagggaaacaca
gtgggagtggaggcagcgcaggctatcgccaaagccttggagtgcaaagaccaacttcag
agttgccactggagtgatatgttcacgggtcgcttgcgctcggaaatcccaactgccctg
aggtccctaggcagtgcgttgatgacagcaggggccagactgcgagagcttgacctgagt
gataacgcctttgggccagatggggtgaagggcattgagactctactgaagagctctgtg
tgtcactctctacaggagctgagactcaacaactgtggcatgggcatcggagggggcaag
atcctggcggcagcgttgactgagtgtcatgaacagtccagtgctctcggtgccccactg
aaactaaaagtgttcatcgcaggcagaaaccgcttggagaacgaaggagccacagccctt
gccctggcatttcagctgatgggaagcctagaggaggtgcacatgccccagaatgggatc
aaccatgctggggtgactgctctggccaccgccttgcagcacaacccccacctgcgcatc
ctcaacctcaacgacaacaccttcaccaagagaggggcattggctatggctcaggctctg
aggcacctgaggactgtgcaggtgatcaactttggggactgcctggtgcgttctgaaggg
gccatcgctctctctgctgtcctgagagagggactgcccactcttaaggagctgaatctg
tcctttggggagatcacggaagctgcagcactggtgttggctcaggctgtacaagacaaa
ccccatatggaaaaactggatctcaatggtaactgtttgggggaggaggggtgtgaggct
ctgaaggagaccatggacaacatggacagggccgacatactggcgtctctcagtgatgat
gagggagagcctgatgaagaagaagaagaggaggaggaggaggaggaagatgagaatgga
aaagagatgacggagaatggagtgaaggatagagacagcccagtgaagcctgagccaact
tgtcatccagagatcctctctttcctcagctcccctactgctgagacactgctcaaactg
ggggacaacaggactggactcatccagcaacacgtggatgtgtctgactctgataaggtt
gccgatgccttcctgagaatctcctctctgtacagtgatgaccatgaggtcaagaaggct
gtcctggagactattgacaccctgttgaagaaggcattctctggttcctccctgcagacc
tacagcttcctgtcaactctactggtgatgctggggctcctcaagggtgagggcaaggtg
aagaaggtgcaggtgttacctggtcacctgttggttttggagcacgctgtccaacaggac
tacttcccccaggaccacgcctccctgctggacacctttgtcgccaggcacggtaaatcc
ctgaagtcctgcagccatgcccgagatagtctcaagtccacactggagagaaggatctcc
ccggaatgctga
DBGET
integrated database retrieval system
