Salmo trutta (river trout): 115153604
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Entry
115153604 CDS
T08542
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115153604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115153604
03012 Translation factors [BR:
stru03012
]
115153604
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115153604
Translation factors [BR:
stru03012
]
Eukaryotic type
Release factors
115153604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
115153604
NCBI-ProteinID:
XP_029555081
Ensembl:
ENSSTUG00000002442
UniProt:
A0A673W645
LinkDB
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Position
18:58186573..58207890
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWEQEEDAEARAAAGLQSALAALNVNAKPFVPNVNAAVFVPTFFQSSPTEI
PISDGHGAEPVASMELSETVAPVENGGGTEADMMVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEEVQGKEEEEMMEEEEEEELPMLKVIPLPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPI
EECTWYTGLPFIPHLDSLPSFSRITDGPVRLPIVDKYKDMGTVILGKLESGFIAKAQQLV
MMPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagccccggattcgtgggagcaggaggaggatgccgaggcccga
gccgccgcgggactccagtccgctctcgcggctctcaacgtcaatgccaagccgtttgtc
ccgaatgtcaacgcggcggtgtttgtaccgacattctttcaaagcagccccacggaaatc
ccaatatctgacggtcacggtgctgagccagttgccagcatggagctgtcagaaacagtt
gctccagtggagaacggaggagggacagaagcagacatgatggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccaggaggagggggagccctgggaggagag
gggggttccagtgaggaggtgcagggaaaggaggaggaggagatgatggaagaggaagag
gaggaggagctgcccatgctcaaagtaatccccctcccaccagacgccccgaagaaggag
catgtcaatgtggtgttcatcgggcatgtggatgctggtaaatcaactattggaggtcag
atcatgtatttgacaggaatggtggagaaaagaaccctggagaaatatgaaagagaagcc
aaagaaaagaacagagaaacatggtacctgtcctgggctctggacaccaaccaggaggag
agagacaaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcac
tttactatcctggacgcccccggccacaaaagctttgtccccaacatgatcggtggggcg
tcacaggctgacctggcagtgctggtgatctcggccagaaaaggagagtttgagacaggc
tttgagaagggaggtcagacacgggaacacgccatgctggccaagacggctggagtcaaa
cacctcatcgtcctcgtcaacaagatggacgaccccactgtcaactggagcttggaaagg
tatgaggaatgtaaagagaagttggtgccatttctgaagaaggtgggcttcaacccaaag
aaggacatctacttcatgccttgctctgggctgacgggagccaacctaaaggagcccata
gaggagtgcacatggtacacggggttgccattcatcccacatctggacagcctgccaagc
ttcagcagaatcacagatggccctgtcagattacccatcgtagacaaatacaaggatatg
ggcactgtgatcctggggaagctggagtctgggttcattgccaaagcccagcagctggtc
atgatgcctaacaggcacacagtggaggtgctgagcctgctgtctgacgaggtggagaca
gatgaagctgttcctggagagaacctgaagctaaggctgaagggcatcgaggaggaggag
atcctgcctggcttcatcctctgtaacgctgagaacctctgccactccggacgcactttt
gacgctcagatcgtcatcattgagcataaatccatcatttgcccaggttacaacgcagtc
ctacacatccacacctgtattgaagaagtacaaatcacagccttaatctgtctagtggac
aagaagaccggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgc
atcgcccggctacgttgtgctggaaccatctgcctcgagaccttcaaagacttcccacag
atggggaggttcaccctacgagatgaaggcaaaaccattgctattggcaaagtgctgaag
ctggtaccagagaaggactaa
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