Salmo trutta (river trout): 115153612
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Entry
115153612 CDS
T08542
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115153612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115153612
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
115153612
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
115153612
NCBI-ProteinID:
XP_029555093
Ensembl:
ENSSTUG00000004475
LinkDB
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Position
18:complement(58869144..58929062)
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AA seq
596 aa
AA seq
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MLPSQAGSAPSGNGSASVSGNTGHGSVVIGSGIRPMLVRAVQTTTGVSDSTGAVGMLGGN
GPEVGPRGGARPVSGTGLTTLQTAGQGGIGSLNTGVGVHGGNRYDPDKKCAPMGCSGSDA
DSDSGDDDDMMGSIRDNRRGVKRERLEMEAAVTGQGTGVPPGAYGLVPGGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETK
DQLKPAFTVASLPGTTSTHTPTAPTTSTSMQVSSGPSFPITNYLAPVSASSNVNANGTIL
KTTGASGGQVMQLPSGFTFMSGTPLPPGTPTIPLGQLHQHSLAIQGQTLTSSQLTQQGQQ
AIFRFPTAVSLGGGMTQQLQAIQVHPTTHANESSSEISQTSSVSTATIVTSSVPTSMAGH
MMYTSPHTVMYASTPTLADGGLAVLNTFSQGPSAMQVSHGQCQDTGETTLDYSRLRWDTG
AVPQVFLTAPSGTMQIPVSAVQLHPMVISQKSSHSSSNLTELQMVNLNTTQSAKND
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagccaggctggatcagcaccatctggaaacggatcagcgtctgtcagtggt
aacacaggtcacggttctgtggttattgggagtggaattcgccccatgttggtcagagca
gtgcagacgacaactggggtcagcgacagcaccggtgcggttgggatgttggggggcaac
ggtcccgaagtgggtccaagaggtggggcaagaccagtgagcgggacgggactgacgact
ctacagaccgccggccagggaggcatcggaagtctgaacacgggagttggggttcacgga
ggcaaccggtacgacccggacaaaaagtgtgcgcccatggggtgcagtgggtcagacgct
gattcggactcgggggatgatgacgacatgatgggatcaatcagagacaacagaagaggt
gtaaagcgggagagactggagatggaggctgcggtgacagggcaggggactggggtacca
ccgggggcttatggtttagtccccggaggtgttgctggcgcaaagccggggaagaagaca
cgtggacgtgtaaagataaaaatggaatttatcgacaacaagttgaggcgatacacaact
tttagcaagaggaagactggcataatgaagaaggcttatgagctctccacgttgacagga
acccaggtcctgctactggtggccagcgagacgggccacgtctacacgttcgccacgcgg
aagctccaacccatgatcaccagcgagacaggcaaggccctcatccagacgtgcctcaac
tctccggactccccgccccgcaacgacccctccactgaccagcgtatgagcgccacaggc
ttcgaggagacggaccttacctaccaggtgtctgagtcggagagccttggggagaccaag
gaccagctaaagcctgcgttcacagtggccagcctcccgggcaccaccagtacccacacg
cccacggcccccaccacctccaccagcatgcaggtaagcagcgggccctccttcccaatt
accaactacttggcgcccgtctcggccagcagcaatgtcaatgccaacggcaccatcctc
aagaccaccggtgcctccggagggcaggtcatgcagctgcccagcggcttcaccttcatg
tcaggcactccgctcccccccggcacccccaccattcctctcggccagctgcaccagcac
tccttggccatccaggggcagacgctcacctcatcgcaactgacacagcagggccagcag
gccatcttccgcttccccactgcagtctccctagggggagggatgacccagcagctgcag
gccatccaggtgcaccccaccacacatgccaacgaaagcagctcggagatctcccagacc
tcctctgtctccactgcgaccatagtcacatcgtcagtgcccacatctatggcgggtcac
atgatgtacaccagcccccatacagtgatgtacgcgtccacgcccacgctggccgatggt
ggcctggctgtgctcaacaccttttctcagggcccctcggccatgcaggtgtcccatgga
cagtgccaggacacaggtgagaccacgctagactacagtaggctacgctgggacacaggt
gctgtccctcaggtattccttacggcaccctcgggcaccatgcagatcccagtctcggca
gtgcagctacacccaatggtgattagtcagaagtcgagccacagcagcagtaacctgaca
gagctgcagatggtcaacctgaacaccacacagagcgctaagaacgactga
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