KEGG   Salmo trutta (river trout): 115153616
Entry
115153616         CDS       T08542                                 
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
stru  Salmo trutta (river trout)
Pathway
stru04510  Focal adhesion
stru04517  IgSF CAM signaling
stru04518  Integrin signaling
stru04519  Cadherin signaling
stru04520  Adherens junction
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
stru05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115153616
   04518 Integrin signaling
    115153616
   04519 Cadherin signaling
    115153616
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115153616
   04520 Adherens junction
    115153616
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115153616
   04810 Regulation of actin cytoskeleton
    115153616
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115153616
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:stru04812]
    115153616
   04147 Exosome [BR:stru04147]
    115153616
Cytoskeleton proteins [BR:stru04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     115153616
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115153616
SSDB
Motif
Pfam: Vinculin Talin_IBS2B Mob_Pre NEMO
Other DBs
NCBI-GeneID: 115153616
NCBI-ProteinID: XP_029555109
LinkDB
Position
18:complement(59020488..59067454)
AA seq 1138 aa
MPVFHTKTIEGILEPVAQQISHLVIMHEDGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENACSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLFNSLNTVKQLLPVLISAIKIFVATKSTHSAGVDEAERNRFFTFEKMSAE
ISEIIRVLQLTTWDEDTWANKKDMECMKRSLAVIEAKMALAKGWLKDSHGQPGEPGDVAV
RVILDEAGKVGELCAGRERRDTLGTAKTLGQMTDQVTELRVRGHGPSPPCVQRAGQCSQG
LDLLLGKVDSATRRLEALTKAKLAFARRLDAAQAWLADPNGGPEGAENIRALLANAQKIA
DLCEDLLERDDIQRSINEIAGLTARLVELRKRGKGDSPEARALYKLIGAALLTLQAKTNR
AVANMRPAKPAITLQGKMEQALRWVNNPGQDDRGVVCEWPQHNSGQAAIRGLVSEGRRLA
GGLGGPYRQDMIVRCDRNEVLMTSLADIAGRGEAEAPQAKATASQLQESLKDLKGRMQEV
MTQEVSDVFSDTTTPIKLLAVSATAPLEAPHREEVFEERAGNFEAHAGRLGATAEKAAAV
GSANKNTVEGIQATVKHTRELTPQVTSAARILLKNPGNQAAYEHFDTMKNQWIDNVEKLT
GLVDEAIDTKSLLDASEEAIKKDIDKCRVAIANVQPQMLVAGATSIARRANRVLLVAKRE
VENSEDPWFREAVKRASDILSHTISPMVIDAKAVAGNIQYPALQKAFLDSCLRILAAVGK
IREAFSLPEPDFPPPPPDLDKLHVSDQEQAPPKPPLPEGEVPPPRPPPPEEKERDKDEDF
PEQKAGELLSEPMMVAARQLHDEARKWSSKLEEEEGVEVDDEDEFTDGEDDYEPELLMMP
SNGNAVNQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRAMI
QCAKDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGR
TNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgccggtgttccacactaagaccatcgagggcatccttgagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggacggggaggtggacgggaaggccatcccggatctg
accggcccggtggccgcggtacaggcagcggtcagtaaccttgtcagggtgggaaaggag
actgttcagaccacagaggaccaggtgatgaagagagacatgcctcccgccttcataaag
gtggagaatgcgtgttctaagctcgtgcaggcagctcagatgttgaaggcggatccctac
tcggttcctgccagagactacctcattgacggttctagaggaatcctgtctggaacctca
gacctgctgctcactttcgacgaagctgaggtgcgtaagatcattcgtgtgtgtaagggg
atcctggagtatttgactgtagctgaggtggtggagaccatggaggacctgatcacctac
accaagaacctaggaccaggtatgactaagatgtctaagatgattgaggagcgacagcag
gagttgacccatcaggaacacagacagatgctattcaactccctgaacactgtcaaacaa
ctactgcctgtactcatatcagccataaagatctttgtagcgactaagagcacacacagt
gctggggtggatgaggcagagagaaacagattctttacgtttgagaagatgagtgctgag
attagtgagatcatcagagtcctacagcttaccacctgggatgaagacacatgggccaac
aagaaggacatggagtgtatgaaacgttctctggcggtgatagaggctaagatggccctg
gcaaaaggctggctcaaagactcccatggacaaccaggcgagcctggggatgtagcggtg
cgtgtgatattggatgaggcagggaaggtaggagaactgtgtgctggaagggaacgcaga
gacacactgggaacagcaaagactctgggacagatgaccgaccaggtcacagagctacgt
gtcagaggacatggtccgtctccaccatgtgttcagcgggccggtcagtgttctcagggt
ctggacctgctgcttgggaaagtggacagcgccacccgcaggctcgaggctttaactaaa
gctaaactggcattcgctaggagactggatgctgcccaggcatggctggcagatcctaat
gggggtccagaaggtgcagaaaacatcagagccttgctggccaatgcccaaaaaattgct
gacctgtgcgaagacctcctcgagagagacgacatccagagatccatcaatgagattgcg
gggctcaccgcacgactagtggagctacgcaagcggggtaaaggggacagtccagaggcg
cgtgcgctatataaactcattggagcagctctcctgaccctgcaggctaagaccaacaga
gcggtggccaacatgagacctgccaaaccagctatcactctgcaaggcaagatggagcag
gccctacgctgggtcaacaaccctggacaggatgacaggggtgtggtgtgtgagtggcca
cagcacaactcaggtcaggcagcaatccggggcttggtatcggagggccgccggttggct
ggagggctgggagggccgtaccggcaggacatgattgtccgctgtgatcgcaacgaggtg
ctgatgacatcactggcagacatagcggggaggggagaggccgaagccccgcaggctaaa
gctactgcttcacaactacaggaaagtctgaaggacttgaagggtcgtatgcaggaagtc
atgacccaggaagtatccgatgtgttcagtgacaccaccacccccattaaactactggcc
gtgtctgcgactgcccccctagaggccccgcacagagaggaggtgtttgaggagcgtgct
ggtaactttgaggcccatgcgggtcgcctgggcgcaacagcagagaaggcggcggccgtg
ggatcagccaataagaacacagttgagggaatacaggctaccgttaaacacaccagagaa
ctcactccacaggtgacctccgcagctcgtatcctgttgaagaatccaggtaaccaggcg
gcctacgaacactttgacaccatgaagaaccagtggattgacaatgtagagaaactcact
ggtctggtggatgaagccatagacaccaagtctctgctggatgcgtctgaggaggcgata
aagaaggacatcgataagtgtcgtgtcgccatagcgaatgtacagccgcagatgctagtt
gccggggcgaccagcatagctcggcgagccaatcgcgtactactggtagcgaagagagag
gtggagaactcagaggacccatggttcagagaagcagtgaaacgtgcatcagatatactc
agccacactatatcacctatggttatagacgctaaggctgtggccggaaatatacagtac
ccagcccttcagaaggcctttttagattcttgcctcagaattctggctgctgttgggaag
atcagagaagccttcagcctcccggagccagacttcccccctccacccccagacctagac
aagctacacgtgagtgatcaggagcaggccccccctaagccccccctaccagagggagag
gtgcccccgccccgccccccacctccagaggagaaagagagagacaaagatgaagatttt
ccagagcagaaggcaggagagctgctcagtgagcccatgatggtggctgctaggcaacta
cacgacgaggcacgcaagtggtccagcaagcttgaggaagaggagggtgtagaggtagat
gatgaagacgagtttactgacggtgaggatgactatgagccagagctgttgatgatgcca
tctaacggcaatgccgtaaatcaacccatcctagccgccgcacaatcgcttcatcaggag
gcgcgcaagtggtccagcaagggaaatgacatcattgcagcggccaagaggatggcgttg
ctgatggctgagatgtcccggttggtacgcggcggcagcggtaataagcgggctatgatc
cagtgtgctaaagacattgccaaagcctcggatgaggtcaccaggctggccaaagaggtg
gccaagcagtgtactgaccgacgcatcagaaccaacctgctgcaggtgtgtgagcgtatc
cccaccatcagtactcagctgaagatcctgtcaacagtcaaagccaccatgctgggacga
accaacatcagcgaggaggagtctgaacaggctacagagatgctggtccataatgcccag
aacctgatgcagtcagtcaaggagaccgtgagagaggccgaggctgcttcaatcaagatc
cgcaccgatgcaggcttcaccctgcgctgggtccgtaagaccccctggtaccagtaa

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