Salmo trutta (river trout): 115153759
Help
Entry
115153759 CDS
T08542
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03271
Virion - Rotavirus
stru04145
Phagocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
stru04518
Integrin signaling
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
stru05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
115153759
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115153759
04514 Cell adhesion molecule (CAM) interaction
115153759
04517 IgSF CAM signaling
115153759
04518 Integrin signaling
115153759
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115153759
09144 Cellular community - eukaryotes
04510 Focal adhesion
115153759
04530 Tight junction
115153759
09142 Cell motility
04820 Cytoskeleton in muscle cells
115153759
04810 Regulation of actin cytoskeleton
115153759
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115153759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115153759
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115153759
04515 Cell adhesion molecules [BR:
stru04515
]
115153759
04090 CD molecules [BR:
stru04090
]
115153759
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115153759
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115153759
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115153759
CD molecules [BR:
stru04090
]
Proteins
115153759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
115153759
NCBI-ProteinID:
XP_029555203
LinkDB
All DBs
Position
2:25635751..25681206
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLLISTVLGVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCMDPEFLKQGEAT
STRCDELESLRKRGCSSAKVENPRGSQRILKDKVVTNRNKGEGKLRPEDITQIQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMLEMSKITTDFK
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEDIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENDMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYIELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSRCKNGVTGEGEMGRKCSNISIG
DEVFFIISITAKQCPKMGKPETIKIKPLGFNEEVEITLNFICECDCHKHGIENSEICHNG
NGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKSCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGKFCECDNFNCDRSNNKLCGGHGHCECRVCICDANWTGSACDCSLDTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPSCEICPTCPGVCAEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRGKLPQPGQAFPLIHCKERDANDCWFYYTYAVNNKTEKEVHVVET
LDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINKFQNPNYGHKAVVL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaactacttctgatttcaacggtgttaggagtcatttgttacagcagtgct
cagcaagaagggaacgagtgcatcaaggctaatgccaaatcctgtggggagtgtattcaa
gtgggagcaaaatgtggctggtgcatggacccagagttcctgaagcagggtgaggccaca
tcgacccgctgtgacgagctggagtccctgaggaagagaggttgcagctccgccaaggta
gagaacccccgaggcagccagcggatcctgaaggacaaggttgtgaccaaccgcaacaag
ggagaagggaaactccgaccagaggacatcacacagatccagccacagaaactcaccctc
agcctcagatctggtgaaccccagtcttttaacctgaagttcaaacgggccgaggattac
cccattgacctctactacctgatggacctgtcctactccatgaaggacgatctggaaaac
gtcaagaacctgggaacacagctgatgctggagatgtcaaagatcacgactgattttaaa
atcggttttggttcctttgtagagaagacggtgatgccttacattagcaccaccccggcc
aagctgctgaacccctgtactggggaccagaactgcaccagtcccttcagctacaagaac
gtcctgaagctgaccagcaatggacaggagttcaacaccctggtgggacaacagcagatc
tctggaaacctggactcaccagagggaggcttcgatgccatcatgcaagtggctgtgtgt
ggtgaggatattggctggaggaacgtcacccgtctgctggtgttctccactgatgctggc
ttccactttgctggagacgggaaactgggagggatagttctgcccaacgatgggaaatgt
cacctggagaacgacatgtacacaatgagccactactatgactacccctccatcgctcac
ctggttcagaaactgagcgacaacaacatccagacgatctttgccatcacagaggagttc
cagcctgtttacatagagttaaagaatctcattcctaaatctgcggtggggacactctct
gccaactccagcaacgttatcaacctcattattgatgcctacaattctctttcctcagag
gtgattctggagaacagcaagctaccagagggagtgaccataatgtaccagtcacgctgc
aagaacggagtgactggtgagggagagatgggaagaaaatgctccaatatctccatcggt
gacgaggtgtttttcatcataagcatcacagctaagcagtgtcctaaaatgggcaaacca
gagaccatcaagatcaaacccctagggttcaatgaggaggtggagatcactctgaacttc
atctgcgagtgtgactgtcacaaacatggcattgagaacagtgagatctgccacaacggc
aacgggacatatgaatgtggagcctgcaggtgcaatgagggccgtattggtagacagtgt
gagtgcagcaccaacgaggtgaccagcgaagacctggataagagctgccgtaaagacaac
ggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgtaagaag
agagagaacccagaggaacgctacagtgggaagttctgcgagtgtgacaacttcaactgt
gaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgtagggtgtgtata
tgtgatgccaactggacaggcagtgcctgtgactgttctctggacaccacgacctgcctg
gcttccaacaagcagatctgtaacggacgaggcacctgtgagtgtggcacctgcaagtgt
actgacccaaagttccagggccccagctgtgagatctgtcctacctgtccaggggtctgc
gcagaacacaaggagtgtgttcagtgcagggcctttgggacgggggagaagaaggacacg
tgtgagagagactgtagctacttcaacctgatcaaggtgaaggacaggggaaagctgcct
cagccaggacaggccttccccctgatacactgtaaggagagggatgccaacgactgctgg
ttctactacacctacgctgtcaacaacaagacagagaaggaggtccatgtggtggaaaca
ctagactgccctgcgggccctgacatcatccccatcgtggctggcgtggtggcgggcatc
gtgctgataggcctggctttgcttctcatctggaagctgctgatgatcatccacgacagg
agagagttcgccaagtttgagaaggagaagatgaatgctaaatgggacacgcaagagaat
cccatttacaagagccctattaataagttccagaatccgaactatggacataaagctgtg
gttctataa
DBGET
integrated database retrieval system