KEGG   Salmo trutta (river trout): 115153759
Entry
115153759         CDS       T08542                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03271  Virion - Rotavirus
stru04145  Phagocytosis
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04514  Cell adhesion molecule (CAM) interaction
stru04517  IgSF CAM signaling
stru04518  Integrin signaling
stru04530  Tight junction
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
stru05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    115153759
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115153759
   04514 Cell adhesion molecule (CAM) interaction
    115153759
   04517 IgSF CAM signaling
    115153759
   04518 Integrin signaling
    115153759
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    115153759
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115153759
   04530 Tight junction
    115153759
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115153759
   04810 Regulation of actin cytoskeleton
    115153759
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115153759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115153759
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115153759
   04515 Cell adhesion molecules [BR:stru04515]
    115153759
   04090 CD molecules [BR:stru04090]
    115153759
Membrane trafficking [BR:stru04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115153759
Exosome [BR:stru04147]
 Exosomal proteins
  Proteins found in most exosomes
   115153759
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin beta subunits
   115153759
CD molecules [BR:stru04090]
 Proteins
  115153759
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin
Other DBs
NCBI-GeneID: 115153759
NCBI-ProteinID: XP_029555203
LinkDB
Position
2:25635751..25681206
AA seq 802 aa
MDLKLLLISTVLGVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCMDPEFLKQGEAT
STRCDELESLRKRGCSSAKVENPRGSQRILKDKVVTNRNKGEGKLRPEDITQIQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMLEMSKITTDFK
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEDIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENDMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYIELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSRCKNGVTGEGEMGRKCSNISIG
DEVFFIISITAKQCPKMGKPETIKIKPLGFNEEVEITLNFICECDCHKHGIENSEICHNG
NGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKSCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGKFCECDNFNCDRSNNKLCGGHGHCECRVCICDANWTGSACDCSLDTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPSCEICPTCPGVCAEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRGKLPQPGQAFPLIHCKERDANDCWFYYTYAVNNKTEKEVHVVET
LDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINKFQNPNYGHKAVVL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggacctgaaactacttctgatttcaacggtgttaggagtcatttgttacagcagtgct
cagcaagaagggaacgagtgcatcaaggctaatgccaaatcctgtggggagtgtattcaa
gtgggagcaaaatgtggctggtgcatggacccagagttcctgaagcagggtgaggccaca
tcgacccgctgtgacgagctggagtccctgaggaagagaggttgcagctccgccaaggta
gagaacccccgaggcagccagcggatcctgaaggacaaggttgtgaccaaccgcaacaag
ggagaagggaaactccgaccagaggacatcacacagatccagccacagaaactcaccctc
agcctcagatctggtgaaccccagtcttttaacctgaagttcaaacgggccgaggattac
cccattgacctctactacctgatggacctgtcctactccatgaaggacgatctggaaaac
gtcaagaacctgggaacacagctgatgctggagatgtcaaagatcacgactgattttaaa
atcggttttggttcctttgtagagaagacggtgatgccttacattagcaccaccccggcc
aagctgctgaacccctgtactggggaccagaactgcaccagtcccttcagctacaagaac
gtcctgaagctgaccagcaatggacaggagttcaacaccctggtgggacaacagcagatc
tctggaaacctggactcaccagagggaggcttcgatgccatcatgcaagtggctgtgtgt
ggtgaggatattggctggaggaacgtcacccgtctgctggtgttctccactgatgctggc
ttccactttgctggagacgggaaactgggagggatagttctgcccaacgatgggaaatgt
cacctggagaacgacatgtacacaatgagccactactatgactacccctccatcgctcac
ctggttcagaaactgagcgacaacaacatccagacgatctttgccatcacagaggagttc
cagcctgtttacatagagttaaagaatctcattcctaaatctgcggtggggacactctct
gccaactccagcaacgttatcaacctcattattgatgcctacaattctctttcctcagag
gtgattctggagaacagcaagctaccagagggagtgaccataatgtaccagtcacgctgc
aagaacggagtgactggtgagggagagatgggaagaaaatgctccaatatctccatcggt
gacgaggtgtttttcatcataagcatcacagctaagcagtgtcctaaaatgggcaaacca
gagaccatcaagatcaaacccctagggttcaatgaggaggtggagatcactctgaacttc
atctgcgagtgtgactgtcacaaacatggcattgagaacagtgagatctgccacaacggc
aacgggacatatgaatgtggagcctgcaggtgcaatgagggccgtattggtagacagtgt
gagtgcagcaccaacgaggtgaccagcgaagacctggataagagctgccgtaaagacaac
ggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgtaagaag
agagagaacccagaggaacgctacagtgggaagttctgcgagtgtgacaacttcaactgt
gaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgtagggtgtgtata
tgtgatgccaactggacaggcagtgcctgtgactgttctctggacaccacgacctgcctg
gcttccaacaagcagatctgtaacggacgaggcacctgtgagtgtggcacctgcaagtgt
actgacccaaagttccagggccccagctgtgagatctgtcctacctgtccaggggtctgc
gcagaacacaaggagtgtgttcagtgcagggcctttgggacgggggagaagaaggacacg
tgtgagagagactgtagctacttcaacctgatcaaggtgaaggacaggggaaagctgcct
cagccaggacaggccttccccctgatacactgtaaggagagggatgccaacgactgctgg
ttctactacacctacgctgtcaacaacaagacagagaaggaggtccatgtggtggaaaca
ctagactgccctgcgggccctgacatcatccccatcgtggctggcgtggtggcgggcatc
gtgctgataggcctggctttgcttctcatctggaagctgctgatgatcatccacgacagg
agagagttcgccaagtttgagaaggagaagatgaatgctaaatgggacacgcaagagaat
cccatttacaagagccctattaataagttccagaatccgaactatggacataaagctgtg
gttctataa

DBGET integrated database retrieval system