KEGG   Salmo trutta (river trout): 115153786
Entry
115153786         CDS       T08542                                 
Name
(RefSeq) nectin-1-like isoform X1
  KO
K06081  poliovirus receptor-related protein 1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03266  Virion - Herpesvirus
stru04514  Cell adhesion molecules
stru04520  Adherens junction
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    115153786
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115153786
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    115153786
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115153786
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:stru04515]
    115153786
   04090 CD molecules [BR:stru04090]
    115153786
Cell adhesion molecules [BR:stru04515]
 Immunoglobulin superfamily
  Nectin family
   115153786
CD molecules [BR:stru04090]
 Proteins
  115153786
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 I-set ig
Other DBs
NCBI-GeneID: 115153786
NCBI-ProteinID: XP_029555221
Ensembl: ENSSTUG00000007579
LinkDB
Position
19:complement(123309..156098)
AA seq 504 aa
MENSVLWIFLTATCVIKGVCGQSVQMEAGQSGYVGSKVDLPCIFINSIPPVKISQVTWQK
VINGKKQNVAIANPSLGVSVAPPFKDRVSFKNPVVRRRTPSLEDTTLTLSSLRLSDEARY
ICEYTTFPAGNRENTVNLTVYARPLTQMSLSTPTLVARSSNLKTPVATCLSANGKPPGTI
RWDTRVRGEATTQEIRNSDGTITVRSDFILVPSRNTHLETLTCITSYNQETYTDSVTLDI
QYEPEVSVEGFDGNWYLDRQNVELTCLTDANPPVSLFQWRMLNGSIPNSVEIRDNVLSFK
GPIRYEVGGTYVCDATNSIGTSSAFMEVSITEEPLPQVGTGDVISVLGMLLAVGLILGVA
ITVLLLNNRRKQRGEMDADSTDSAPSLKLAPPPASRKPGDEFQRSGRVYEDLPNTADYVS
YRLACNKDDYPEPYSPPINPPLSLPDSPPINPPLSFLSQHAYTHSNNTFSPASHPSSVFR
YPSLPSLSPPPGLAPYTFPKEQYV
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggagaattctgtgttgtggatattcctgacagcaacatgtgttattaaaggtgtgtgt
ggtcagtcagtccagatggaagccggacagtcagggtacgtgggctctaaggtggatcta
ccatgtatttttatcaacagcatcccacctgtcaagatctcacaggtgacatggcagaag
gtgattaatggaaagaaacagaacgtggctatagctaacccgtctctaggcgtgtctgta
gctccgcccttcaaagacagagtcagcttcaaaaaccctgtggtgcggaggagaactccg
tccctggaggacaccactctgaccctctcgtctctgcgactgtctgacgaggccagatac
atctgtgaatacactaccttccctgctggcaaccgcgaaaacacagtcaacctcacagtc
tacgctcgacctttgacccagatgagtttgtcaacacccacactggtagctcggtcatcc
aatctgaagacgccggtcgccacctgcctctcggccaatgggaagcctccaggaaccatc
aggtgggacacgcgtgtgcgtggtgaagcgaccacccaggagatccgtaactctgatggg
acgatcacggtgcgaagcgacttcatcctggtacccagcaggaacacacacctggagaca
ctcacctgtatcacctcctataaccaggagacatacaccgactctgtcacgctggacata
cagtatgaaccagaggtgtcagtggaggggttcgatgggaactggtacctggaccgtcag
aacgttgagctcacatgtctgaccgatgccaacccacctgtctctctgttccagtggaga
atgttgaatggttccataccgaacagcgtagagatccgtgacaacgtcctgtcatttaaa
ggaccaatcagatacgaggtaggagggacttatgtctgcgacgcaaccaatagcatcggg
acaagctccgccttcatggaggtcagcatcacagaggagccactgccccaggtgggaacg
ggtgatgtcatcagtgttctgggcatgctattggctgtggggctgattctgggcgtggcg
atcactgtgctgcttcttaataacagaagaaaacagaggggagagatggatgctgactcg
acagactctgctccttctcttaaactggctcctcctcctgccagtagaaaacctggtgat
gagttccagcggtcagggagggtgtatgaagacctccccaacacagcggactatgtcagc
taccgactggcctgcaacaaggatgactacccagaaccctactctccccccatcaaccct
cccctctccctccccgactctccacctatcaaccctcccctctccttcctctcccagcat
gcctacacccactccaacaataccttctcccctgcctcccatccctcctctgtcttcaga
tatccttccctcccctccctatccccccctcccggccttgcaccctacaccttccctaaa
gaacagtatgtctga

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