Salmo trutta (river trout): 115153786
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Entry
115153786 CDS
T08542
Name
(RefSeq) nectin-1-like isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03266
Virion - Herpesvirus
stru04514
Cell adhesion molecules
stru04520
Adherens junction
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115153786
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115153786
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115153786
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115153786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115153786
04090 CD molecules [BR:
stru04090
]
115153786
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Nectin family
115153786
CD molecules [BR:
stru04090
]
Proteins
115153786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
Motif
Other DBs
NCBI-GeneID:
115153786
NCBI-ProteinID:
XP_029555221
Ensembl:
ENSSTUG00000007579
UniProt:
A0A673X796
LinkDB
All DBs
Position
19:complement(123309..156098)
Genome browser
AA seq
504 aa
AA seq
DB search
MENSVLWIFLTATCVIKGVCGQSVQMEAGQSGYVGSKVDLPCIFINSIPPVKISQVTWQK
VINGKKQNVAIANPSLGVSVAPPFKDRVSFKNPVVRRRTPSLEDTTLTLSSLRLSDEARY
ICEYTTFPAGNRENTVNLTVYARPLTQMSLSTPTLVARSSNLKTPVATCLSANGKPPGTI
RWDTRVRGEATTQEIRNSDGTITVRSDFILVPSRNTHLETLTCITSYNQETYTDSVTLDI
QYEPEVSVEGFDGNWYLDRQNVELTCLTDANPPVSLFQWRMLNGSIPNSVEIRDNVLSFK
GPIRYEVGGTYVCDATNSIGTSSAFMEVSITEEPLPQVGTGDVISVLGMLLAVGLILGVA
ITVLLLNNRRKQRGEMDADSTDSAPSLKLAPPPASRKPGDEFQRSGRVYEDLPNTADYVS
YRLACNKDDYPEPYSPPINPPLSLPDSPPINPPLSFLSQHAYTHSNNTFSPASHPSSVFR
YPSLPSLSPPPGLAPYTFPKEQYV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagaattctgtgttgtggatattcctgacagcaacatgtgttattaaaggtgtgtgt
ggtcagtcagtccagatggaagccggacagtcagggtacgtgggctctaaggtggatcta
ccatgtatttttatcaacagcatcccacctgtcaagatctcacaggtgacatggcagaag
gtgattaatggaaagaaacagaacgtggctatagctaacccgtctctaggcgtgtctgta
gctccgcccttcaaagacagagtcagcttcaaaaaccctgtggtgcggaggagaactccg
tccctggaggacaccactctgaccctctcgtctctgcgactgtctgacgaggccagatac
atctgtgaatacactaccttccctgctggcaaccgcgaaaacacagtcaacctcacagtc
tacgctcgacctttgacccagatgagtttgtcaacacccacactggtagctcggtcatcc
aatctgaagacgccggtcgccacctgcctctcggccaatgggaagcctccaggaaccatc
aggtgggacacgcgtgtgcgtggtgaagcgaccacccaggagatccgtaactctgatggg
acgatcacggtgcgaagcgacttcatcctggtacccagcaggaacacacacctggagaca
ctcacctgtatcacctcctataaccaggagacatacaccgactctgtcacgctggacata
cagtatgaaccagaggtgtcagtggaggggttcgatgggaactggtacctggaccgtcag
aacgttgagctcacatgtctgaccgatgccaacccacctgtctctctgttccagtggaga
atgttgaatggttccataccgaacagcgtagagatccgtgacaacgtcctgtcatttaaa
ggaccaatcagatacgaggtaggagggacttatgtctgcgacgcaaccaatagcatcggg
acaagctccgccttcatggaggtcagcatcacagaggagccactgccccaggtgggaacg
ggtgatgtcatcagtgttctgggcatgctattggctgtggggctgattctgggcgtggcg
atcactgtgctgcttcttaataacagaagaaaacagaggggagagatggatgctgactcg
acagactctgctccttctcttaaactggctcctcctcctgccagtagaaaacctggtgat
gagttccagcggtcagggagggtgtatgaagacctccccaacacagcggactatgtcagc
taccgactggcctgcaacaaggatgactacccagaaccctactctccccccatcaaccct
cccctctccctccccgactctccacctatcaaccctcccctctccttcctctcccagcat
gcctacacccactccaacaataccttctcccctgcctcccatccctcctctgtcttcaga
tatccttccctcccctccctatccccccctcccggccttgcaccctacaccttccctaaa
gaacagtatgtctga
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