Salmo trutta (river trout): 115153855
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Entry
115153855 CDS
T08542
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00603
Glycosphingolipid biosynthesis - globo and isoglobo series
stru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
115153855
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115153855
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
115153855
Glycosyltransferases [BR:
stru01003
]
Glycan extension
FORS blood group (Forssman antigen)
115153855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
115153855
NCBI-ProteinID:
XP_029555331
LinkDB
All DBs
Position
19:complement(4397862..4430875)
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AA seq
352 aa
AA seq
DB search
MVVGRFQVVGNCCCTTASERMRGRGHFLLFLVMAVGIAICWFVFSYGAPVSLNQVHPHVV
LNHRLQSKQAKLMEPVRTDVLTVTPWLAPIVWEGTFDPQVIDEAFISQHLTIATTVFAVG
KYTRFLRDFLESAEKHFMVGLDVHYYVFTDLPGDVPSNVTLGVGRLLSIVRVPKFDRWQE
ISLRRMEHIQTAIKDKIHREAHYIFCMDVDMRFHGRVGPEALGRLVAAIHPWFYMYPRNE
YPYERRTVSKAYIPLDQGDFYYQANIFGGTLEDIHRLTKTCREHLEVDKSEGVEAVWQEE
SHLNWYLLRNKPTKLLSPEYVWDDAKEQDAKEIKLVRFSSVIKNKAEVRENL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggggagatttcaggtcgtcggcaactgttgctgtaccacagcaagtgaacga
atgaggggacgtggacatttcctactttttttagtaatggctgtgggaatagcgatctgc
tggtttgtcttctcatacggtgcacctgtgtctctcaaccaggtgcatccccatgttgtg
ctgaatcacagattacagagcaagcaagccaaactgatggaaccagtgaggactgacgtg
ctgactgtaaccccgtggctggctcctatagtctgggaagggacttttgacccccaggtc
atagacgaggcctttatttcacaacacctcaccatcgctaccactgtgttcgctgtaggg
aaatacactcgttttctccgggacttcttagagtcggctgagaagcacttcatggtgggg
ctggacgtgcactactatgtgttcaccgacctgcccggcgacgtgcctagcaacgtgact
ctgggtgtcggcagactgctcagcattgtgagggtgccgaagttcgaccgctggcaggag
atatccctccgccgcatggagcacatccagactgccattaaggataaaatccaccgggag
gcgcactacatcttctgcatggacgtagacatgaggttccacggccgtgtggggcccgaa
gctctggggagactggtggccgccatccacccctggttctacatgtacccccggaacgag
tacccttacgagcgacggaccgtctccaaagcctacatacccttggaccagggagacttc
tactaccaggccaacatattcggaggaacgttggaggatattcaccggctgaccaagacg
tgtagggagcacctggaggttgataagtcagagggtgtggaggctgtgtggcaggaagag
agtcacctgaattggtacctgttgaggaacaagcccaccaagctcctgtcaccggagtat
gtgtgggacgacgctaaagaacaggatgcgaaggagatcaaattggtccgcttctcctct
gtcattaagaacaaggcagaggtcagggagaacctctga
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