Salmo trutta (river trout): 115153896
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Entry
115153896 CDS
T08542
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115153896 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115153896 (rnf43)
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115153896 (rnf43)
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115153896 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
115153896
NCBI-ProteinID:
XP_029555413
Ensembl:
ENSSTUG00000023675
UniProt:
A0A674AA14
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All DBs
Position
19:complement(5887496..6112035)
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AA seq
866 aa
AA seq
DB search
MIVLQRRLAGLWPWLLMAALQVVFGQTGLELAAAVETERSALRAVIKVTLLKNEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLH
KARLALERGAQAVIFDVTDDVNAKFQLPESDSLLRPVVLMQAADAEMLMELVNRNEEARV
RIDIKREDPKWPHYDVVVLLTIVLAILAIVSIFAFRYRCKSSRTWDSVHQQTMRAISRLE
TRTYSSQGCGGSQRHRGGWGSNSSSNSTPVCAICLDEFLEGQNLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGSELPGQPRRTRLQQTPEHSQGFLHPHAHTFPQHPIPFSMRPHF
PRGPSGPYPSLGHYSGSPPLDPQTHRFLPSRPLGPGCGYLHPAEGPGRPHRAGVSCKTAG
HSMETHYGPGPRRSCHAYRSGCPSQRSASSSRLHHAPSSAPRASAGGAHSRGNEGGSCSG
GSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDP
FVYYGPGPGPTGRRDSMEAGAQRPRSLDSVVNRDRGGRGGGRRGGCSEEQQQAVFSHVHY
HRHRHHHYREEGEREHAQGQGPGRGLDEELGATAAAFGPESGSPPALDKDSPVCPLKDSP
YHCPKADPTDSRGAHGHGTEGQGHELSHPSGPSPVLVTPAPLPPPPSCCHQDHSHGGHPH
RRAGRLGDCVLDGPSVRFQQNLDLQDDCSIHIHYDQGYCCPPPDLSPALLSMPVPLIMDS
GGMRPLGGLEDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLVVPIDRTSPPSSRRHHGPA
NVYNTDVCLYCQTLHNNQGSEEESGV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttctccagcggcgactggccgggctctggccgtggctgctcatggcggccctg
caggtggtgtttggccagacgggcctggagctggcggcggccgtcgagacggagcgctcg
gccctcagggctgtcatcaaggtgacactgctgaaaaacgagccaacggggaagcccatc
actctggaagggctgtttgtcggagggagcgccggctctgcagaggggaagctcatgcag
tcccaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtcagacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgcctcagtgtctgcccctgctccac
aaggctcgcctggcgctggagagaggggctcaggctgtcatctttgatgtcactgatgat
gtcaacgctaagttccagctgcctgagtcagactccctgctgcgtccggtggtgctgatg
caggctgcggatgctgagatgctgatggaactggtcaacaggaacgaggaggccagagtc
cgcatcgacatcaagagagaggaccccaaatggccccactatgatgttgttgtcctgctc
actatagtccttgctattctggccatcgtttcgatctttgctttccggtacagatgcaag
tccagcagaacctgggactcggtccaccagcagacgatgcgagccatcagtcgtctggaa
acgcggacatacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctctaactccactcccgtctgtgccatctgtctggatgagttcctggag
ggacagaacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggctgttgcagcaccgcacctgtcccctctgcatgcacaacatcatgggttcagagctg
cctggacagccacggaggacaagactacagcagacccccgagcacagccagggtttcctg
cacccccacgcccacaccttcccccagcaccccatccccttctccatgaggcctcacttc
ccccgcggcccctctggtccatacccctccctgggccactatagcggctccccgcctctg
gacccccagactcaccgcttcctccctagccggcccctgggccctggctgcggatacctc
caccctgcagagggccccggaaggccccacagagccggggtcagctgcaagacagcaggc
cactctatggagacgcactatggccccgggcctcgccgctcctgccacgcctaccgctca
ggctgcccttcccagcgcagcgcctccagttccaggctccaccacgccccctcctctgct
ccccgcgcctccgcagggggagcccacagccgggggaacgaggggggcagctgctctggg
gggagctaccggacagagcgcagtggctacctggctgatgggccggccagtgactccagc
tctggcccctgtcacggctcctccagtgactcggtactcaactgtactgacgtgtccctg
cagggtgtttatggtagctggtccacgttccgcagctccctgagcagtgattatgatccg
tttgtgtactacgggccggggccgggaccgacaggccgcagggacagcatggaggcaggg
gcccagagacccaggtccctggattcagtggtgaacagagaccgaggaggaagaggagga
ggaagaagaggagggtgctctgaggaacagcagcaggctgtgtttagccacgtccactac
caccgccaccgtcaccaccactaccgagaggaaggggagagggagcacgcccagggccag
gggccgggcagggggttggacgaggagctgggggctactgctgctgcttttggtcctgag
tcaggatctcccccggctctggacaaagattccccagtgtgccctctgaaagacagcccc
tatcactgccctaaggcagaccccacagacagtagaggggcccatggccacgggacagag
ggtcagggccatgagctcagccacccctcaggcccttctccagtcctggtaaccccagcc
cccttaccacccccacccagctgctgccaccaggaccacagccacgggggccaccctcac
cggagggcaggccggctgggcgactgtgtcctcgacggcccctcagtgcgtttccaacag
aacctggacctgcaggacgactgtagcatccacatccactatgaccagggctactgctgc
cccccgcccgacctgtcccccgctctgctctccatgcctgtgcccctcatcatggactct
ggaggaatgaggcccctggggggtctagaggactggccttgctgtggaggtccccaccat
gtggtgtggcagaagcgggtgcagcaggcccactctgagccccagctgctggggcccggg
ctggtggtccctatagacagaacctcgcccccatccagcaggcgccaccacggcccagcg
aacgtctacaacacagacgtttgtttatactgccaaacattacacaataatcagggatcc
gaggaggagtccggcgtgtga
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