Salmo trutta (river trout): 115153993
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Entry
115153993 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115153993
04082 Neuroactive ligand signaling
115153993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115153993
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115153993
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115153993
NCBI-ProteinID:
XP_029555598
Ensembl:
ENSSTUG00000010760
LinkDB
All DBs
Position
19:complement(11984165..12000828)
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AA seq
468 aa
AA seq
DB search
MEIITVDRGFVAVECLRGMAFVFNCFFLSCVSNVWGNHVKSTQTENIYLDNITRVLDRLL
DGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEI
LRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRL
MNFPMDGHACPLKFGSYAYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERL
KSNTGEYVVMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTV
LTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAA
SIKAAQEAAEAGRTDGESSSDASSMLKKRINSTPHFERPAEVFPNPPVNAQAFLQQGSAV
PSNNLLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaattataacagttgaccgcggctttgtggctgtggagtgtttacgaggcatggct
ttcgttttcaattgtttttttctgtcctgtgtgagcaatgtttggggaaatcatgtgaaa
tcaacgcaaactgagaatatctatttggataacatcacgcgtgtattggatagattacta
gatggatatgacaacagactgcgacctggatttggaggtccagttactgaggtcaaaaca
gacatctttgtcacaagctttggtccagtgtcagatgttgagatggagtacactatggat
gtatttttccgtcaaacgtggattgacgagaggttgaaatttgagggccccatcgagatt
ctgcgtctcaacaacctcatggtcagcaagatctggacaccagacacattcttccggaat
ggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgcatcatgcag
aacggaactatcctctacactatgagattgacaataaacgcagagtgtcccatgagactg
atgaacttccccatggacggccatgcctgtcctctcaagtttggtagctatgcctacccc
atgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaagtaccagag
gagtcctccagcttgctacagtacgacctaataggacagacagtgtccagtgagaggtta
aaatccaacactggtgaatatgtagtcatgactgttcacttccacctgcaaaggaagatg
ggcttcttcctgattcagacatacatcccctgtatcatgaccgtgatcctggctcaggtc
tctttttggatcaataaggaatcggttcctgcacgaactgtattcggcattaccacagtg
ctaaccatgaccacactcagcatcagcgcccgccactctttgcccaaagtctcttacgcc
acggccatggactggttcatcgctgtgtgtttcgccttcgtcttctcagccctcattgag
tttgccgcagtcaactacttctccacgctgcaggccaaccgggagcttcgcaaggcggcc
tccattaaggcagcccaggaggcagcagaggccgggaggaccgacggggagtcctcttcg
gatgccagcagtatgctgaagaagaggataaactccacgcctcactttgagaggccagcg
gaggtgttccctaaccctccagtgaacgcccaggccttcctccagcaaggctcagccgtg
ccgtccaacaacttactgactggcaccagcatcatagacaagtactcgcgcatcctcttc
cctctgtcgttcggggccttcaacctggtctactggatcgtctatctcactaaggacacc
atggagatgacaagggacagcgtgtga
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