Salmo trutta (river trout): 115153994
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Entry
115153994 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115153994
04082 Neuroactive ligand signaling
115153994
04519 Cadherin signaling
115153994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115153994
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115153994
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115153994
NCBI-ProteinID:
XP_029555600
LinkDB
All DBs
Position
19:complement(11959235..11983782)
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AA seq
354 aa
AA seq
DB search
MAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECP
MHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDS
GVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGV
TTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGK
SVVPEKQKKKKESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPK
PKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcggttctccgtttgaacaacctgatggccagtaaaatctggacccctgacacattc
tttcacaatggcaagaagtctgtggcacacaacatgactatgcccaacaaactgctacga
atcacagaggagggaactctgctctatactatgagattgaccgtaagggcagagtgtccc
atgcacctggaggacttccccatggatgcccatgcttgcccactgaagttcggcagctat
gcttacaccagggctgaggttgtgtacgtgtggacaagaggggcagcccagtctgttgtg
gtggctgaagatggctctcggctcaaccagtatgatctgatggggcaaagtgtggactct
ggggttgtccagtccagcacaggagagtatgttgtcatgacgacacacttccacctgaag
aggaagattggttattttgtcatccagacgtacctgccctgcatcatgacggtgatcctg
tcccaggtgtccttctggctcaacagagagtccgtcccagccaggactgtgttcggagtg
acaactgtgctgaccatgaccaccctcagtatcagtgctaggaactctctccccaaggtg
gcctatgccacagccatggactggttcattgcagtctgctatgcctttgtcttctctgcc
ctcattgagtttgctacagtcaactacttcacaaagaggggctacgcctgggatggaaaa
agtgtggtgccagagaagcaaaagaagaagaaggagtccctcttgaagaagaacaacacc
acagcctacactgccgctactgctacagccttcgctccaaacattgccagagatcctggt
ttggccaccattgccaaaagtgctccccctccccccactgagcccaaggaagagccaaag
cccaagccaccagaggccaagaagaccttcaacagcgtcagcaagatcgacaggatcgcc
agaatagccttcccgttactctttggaacctttaacctggtctactgggcaacttacttg
aataaaaagcctaaattacagggtatgaccccaggatcccactaa
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