Salmo trutta (river trout): 115154014
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Entry
115154014 CDS
T08542
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115154014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115154014
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115154014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
115154014
NCBI-ProteinID:
XP_029555636
Ensembl:
ENSSTUG00000015583
UniProt:
A0A673YQZ9
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All DBs
Position
19:complement(13055528..13059996)
Genome browser
AA seq
332 aa
AA seq
DB search
MPVSRMRMRPWLEDKIESNSISGLVWVDKDKKIFSIPWKHAARHGWDLNKDACLFKQWAM
HTGKFIQGETTPDPKTWKANFRCAMNSLPDIKEVKDKSINRGSGAVRVYKMLNVSTKPNN
KRSKAKDAKKNDKGLKIKTEEMDYSATHCLEDRNTNTHLQEDRKIQENKVDSSDNLGETI
TAASYLDGSVNDPDVPDFITSVEIGPDSINYYSSFQVSPDHSTDYEDLNEETLIEIAQHW
EQLELPGSVNSKGFLSNEEATVESYNTAESNHSPESQWSDNSGSEIQLRLYTELSPGLPM
AEDLVSYTDHWALNNTLNNSTTSYLQQISCPL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgaggccttggctggaggataagattgagtccaactcc
atcagtggtttggtgtgggtggacaaagacaagaagatattctccatcccatggaagcat
gctgcacgtcatggatgggacctgaacaaggatgcctgtctattcaagcaatgggccatg
cacacagggaaattcatacaaggcgagactacaccagaccctaagacatggaaggctaat
ttccgctgcgcaatgaactcccttcctgacatcaaggaggtgaaagacaaaagcatcaac
agagggtctggagcggtgcgcgtttacaaaatgctgaacgtcagcacaaagccaaataac
aagaggtcaaaagcaaaggatgcaaagaaaaatgacaaggggttaaagatcaagacagag
gaaatggactacagcgcaacccattgcctcgaggatcgcaacaccaacacacacctgcag
gaggacagaaagatacaggagaacaaagtcgacagctcagacaacctaggtgagaccatc
acagcagcgtcatatcttgacggctctgtcaatgaccctgatgttccagactttatcacc
tctgtggaaataggaccagacagcatcaactactactcgtctttccaagtgtcaccggat
cactccacagactatgaagatttgaacgaagaaacacttattgagattgcacagcattgg
gagcaattggagctgccaggcagtgtaaacagcaaggggttcctgagcaatgaagaagct
acagtagagtcatacaacactgcagagtctaaccacagtccagagagccaatggagtgat
aactcagggtcggaaatacagctgcggttatacacagaactgagcccaggactaccaatg
gcagaagatctcgtctcttacaccgaccactgggcattgaacaacacactgaacaacagc
acgaccagttatcttcaacagatctcttgcccactttga
DBGET
integrated database retrieval system
