Salmo trutta (river trout): 115154022
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Entry
115154022 CDS
T08542
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
stru04520
Adherens junction
stru04916
Melanogenesis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115154022
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115154022
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115154022
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115154022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115154022
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115154022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115154022
NCBI-ProteinID:
XP_029555649
Ensembl:
ENSSTUG00000023812
LinkDB
All DBs
Position
19:14047337..14120286
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AA seq
502 aa
AA seq
DB search
MPQLSSGGGDDQGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESETSSNATA
VRRGQQNEHRGYQEKHREHLDSVSKHQDGGMYKTAYPGYPFLMLPDPYIPNRSVSPSSNK
VSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPPGGVG
QMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGLHPTGIPHPAIMP
PSGKLDHHDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKE
SAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRGCAGEKSK
ADWGKKKRRKREKQQDSSADPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWCTS
PTSSDGSAIDSPLSPVDGVPPQHPSSPLPASPLHPQPSKHTPLILSKSKTTELSFKALIE
SSQQHDNIHHHHHHDCTLPKSH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggcggaggagatgatcaaggagcaaacgatgaaatgatatcc
ttcaaggatgaaggcgaacaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaagttcgaacgcaacggcg
gtcagacgaggtcagcaaaacgaacatagaggttatcaagagaaacaccgggagcacctc
gacagcgtgtccaaacatcaagatggaggaatgtataaaacagcgtatccggggtacccg
tttctcatgctgcctgacccatacatccccaacagatcagtgtcaccgtcttccaacaaa
gtttcagtggtccaacagtctcacgggatgcaccccctgacgtccctcctgccctacagc
aacgaccacttcaaccccagcccccctcacctgcccacagacatgagtcagaaaggcgtt
cacaggccccagtcccaggacatctcaggtttctactccctaccccctggcggtgtagga
cagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctcatgtgga
ttcagacagccctactcctccagtctccccaacagctcttcctaccccaggttctctcac
tctctgatgctggggccaggcttgcatcccacggggatcccccacccagccatcatgccc
ccttcaggcaaactggaccatcatgaccattacgaccggaacatgtacgctaagcctcac
caggagcccaagcgggagaaggagcccaagaagccggtgatcaagaagcctctgaatgct
ttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacactgaaggag
agcgctgccatcaaccagatactgggccgaaggtggcacgccctgacccgggaggagcag
gccaagtactatgagctggccaggaaggagcggcagctacacatgcaactctaccccagc
tggtccgccagagacaactacgatgcaggccttagagggtgcgcgggggaaaagagtaaa
gctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactcctcagcagac
cctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggactggtgc
ggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgcaccagc
cccacttcttccgatggaagcgctatagactcgcccctctcccccgttgacggcgtcccc
cctcagcaccccagctcccctttgcctgcttcccccttgcacccccagcccagcaaacac
acaccccttatcctctcaaaatccaagaccacagaactttctttcaaagctttaatagaa
tcatcccaacagcacgacaatatccatcatcatcatcatcatgactgtaccctgcccaag
tctcactag
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