Salmo trutta (river trout): 115154031
Help
Entry
115154031 CDS
T08542
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115154031 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115154031 (drosha)
03009 Ribosome biogenesis [BR:
stru03009
]
115154031 (drosha)
03036 Chromosome and associated proteins [BR:
stru03036
]
115154031 (drosha)
Enzymes [BR:
stru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
115154031 (drosha)
Messenger RNA biogenesis [BR:
stru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
115154031 (drosha)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
RNase
115154031 (drosha)
Prokaryotic type
rRNA processing factors
115154031 (drosha)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
115154031 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
Motif
Other DBs
NCBI-GeneID:
115154031
NCBI-ProteinID:
XP_029555674
Ensembl:
ENSSTUG00000007834
UniProt:
A0A673XJQ4
LinkDB
All DBs
Position
2:complement(30660394..30817031)
Genome browser
AA seq
1412 aa
AA seq
DB search
MSFHQGRGGGGCPRGRAPPGLHGGQHGSHQNYRPTNLGPPPPQPPMPPYHYDPQAQHSSS
HSYGGQGNSGGGGYITAHSDYMSYPPPVPTQGGMTASPLSQCPVRPPFPNPQSHPNFPPP
PLAGNTSGSSISGSPASAQSAYHYMMPSVPPPPFPHPPGMPPTMPPQSMSYHQPPYSMNY
SHPPFPPLPNFSPGNYGSHQGPSSFKPDHGGFRHGPHGGGGQQYKAEKQQQMDDRGQRSP
ERGRGGRHDDHRQQKGGYAYSSRGGGGDRHKMDFPMNQRGKDRGRSPDRRRPEGGRHRSE
YEQRGRTPPTRHRSRERSRERHRHRDSRRSQSPDRHRKRPRSRSGSRERKRGRWEEERDR
RSDGPGMSRDRERSYTSVRSRDTEPEVSIDRDRDRERGERERGERERGERERGEREKGEG
DEREEDELLKPAWIRCTHAENYYSSDPMDQVGDSTVVGTSKLRDLYERFEEELVKRQDRA
QSARPKWDPPKTKLDEEPGTVLISDSIPKEECHSHSSSESDCESDGGGSTCSSSSDSDVF
DVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKSRRTGIRHSIYPGEESVKECR
PMNNNSGKLYHYRITVSPPTNFLTDRPTVVEYDDHEYLFEGFSLFSHMPLTNIPLCRVIR
FNIDYTIHFIEEMTPENYCVKGLELFSSYLFQDILELYDWNLTGPEWDNQSPGCQKFHFM
PRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELKWQKYAEECKGMIV
TNPGMKPSSVRIDQLDREQFNPEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRH
LLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDLCQHAMM
LPVLTHHIRYHQCLKHLDDLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGI
RQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSV
HLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMAN
CFEALIGAVYLEGGLEESKQLFGRLLFNGEDLREVWLNYPPHPLQVQEPQTDRQLIETSP
VLQKLTDFEDTIGVMFTHCRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYL
FIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLE
SFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIP
LYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKR
FIERKYRQELKEMRRERDRQEKEGDEPEDSRK
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccatcagggtcgaggaggtggaggctgccccagaggaagagcccccccaggt
ctacatgggggtcaacatggctcccaccaaaactaccggcccaccaacctaggaccccca
cctccccagccgccaatgcccccctaccactacgacccccaggcccagcacagctcctct
cacagctatggtggccaaggaaacagtggtgggggtggttacatcactgcacattcagac
tacatgtcttacccccctccagtgcccactcaggggggtatgacggccagtcccctcagc
cagtgccctgtacgcccgcccttccccaacccccagagccaccccaacttcccccctcct
cctctcgccggcaacacctctggaagctccatatctgggtctccagcgtcagctcagagt
gcttaccactacatgatgccctccgtaccccctccaccttttcctcaccctcccggcatg
cctcctaccatgcctccacagtccatgagctaccatcaacctccctactccatgaactac
tcccatcctccattccctcctctgcccaactttagcccagggaactacggctcccaccag
ggtcccagctccttcaagccagaccatgggggcttcaggcacggtcctcatggaggagga
gggcagcagtataaggctgagaaacaacagcaaatggacgacaggggtcagaggtcgccg
gagagaggcagagggggtcgccatgacgaccacaggcagcagaagggtggctatgcttac
agcagtcgtggtggtggtggcgacagacacaagatggacttccccatgaaccagagaggg
aaggaccgaggcaggagtccggacagacgcaggccggagggagggagacaccggtcagag
tacgaacagcgtgggaggactcctcctacccgtcaccggagtcgagaacgcagcagggag
aggcatcgccacagagacagtcggaggtctcagtcacctgaccgacacaggaagagacct
agaagtcggtcaggcagcagagagaggaagcgtggtcgctgggaggaggagagggaccgg
aggtccgacggaccggggatgagcagagacagagagcgcagctatacctccgtcaggagc
cgagacacagagcctgaagtctccatagatagagacagagaccgggagagaggcgagagg
gagagaggcgagagggagagaggcgagagggagagaggcgagagggagaaaggggaggga
gatgagagagaggaggacgagttgctgaagcctgcgtggatccgctgtacccatgctgag
aactattactccagcgatcccatggatcaagtgggtgattctacggtggtggggaccagt
aagctgagggacctgtacgaacgctttgaggaagagctggtcaagagacaggatcgtgct
cagtcggcccggcccaaatgggacccccccaagaccaagctagatgaggagcccggtact
gtattgatatcagatagtatccccaaagaggagtgccacagtcacagcagcagtgagtca
gactgtgagtctgacgggggaggcagtacctgctccagcagctctgactctgacgtgttt
gacgtgatcgctgagatcaagaggaagaaggcccatccagaccgtctgcatgacgagctg
tggtacaacgacccaggacagatgaacgatgggccgttgtgtaagtgcagtgccaagtcc
agacgcacagggatacgccacagcatctaccctggagaggagtcggtgaaggaatgtcgt
ccgatgaacaacaactctgggaagctctaccactacagaatcactgtgtctccacctact
aacttcctgacggacaggcctacggttgtcgagtacgatgaccatgagtacctgttcgaa
ggcttctccctcttctcccacatgcctctcactaacattccattgtgcagagtgattcgt
ttcaacatagattacaccattcactttattgaagagatgacaccagagaactactgtgtg
aaaggactggagctgttctcttcctacctattccaggatatactggagctctatgactgg
aacctcacaggtccagagtgggacaaccaatctcctggatgtcagaagttccacttcatg
cctcgctttgtccgcttcttacctgacggtggtaaggaggtgctctccatgcaccaggtg
ctcctctacctcctgcggagctccaagcctctggtccctgaggaggagatagctgacatg
ctgcagtgggaggaactgaagtggcagaagtacgcagaggagtgcaagggcatgatcgtc
accaaccctggcatgaagcctagctctgtgcgtattgaccagctggacagagagcagttc
aatccagaggtcatcaccttccccatcattgtccactttgggatccggcccgcccagctc
agctacgctggggacccccagtaccagaagctgtggaagagctatgtgaaactacgccac
ctgctggctaacagccccaaggtcaagcagatagacaagcagaagctaacacagagggag
gaagcccttcagaagatccgccagaagaacaccatgcgccgggaggtgaccgtggagctc
agcagccagggcttctggaagactggcatccgctctgacctctgtcagcatgctatgatg
ttgccagtgttgacccaccacatccgctaccaccaatgtctgaagcacctggacgacctg
attggctacgtcttcaaggagcgctgtctgttacagctggccatgactcaccccagccac
cacctgaactttggcatgaacccggaccacgcccgtaactccctgtccaactgcggcatc
cgccagcccaagtatggggacagaaaggtccaccacatgtacatgaggaagaagggaatc
aacaccttgatcaacatcatgtctcgtcttggacaagatgacccctccccctccaggatc
aatcacaacgagcggctggagtttctcggcgatgccgtcgtggagtttctcaccagtgtt
catctgtactacctgttccccagtctggaggaaggagggctcgccacctacagaacagcc
attgtacagaaccagcacctggccatgctagcaaagaaactggagttggatcgcttcatg
ctgtatgcccacggcccagacctctgtagggagtcagacctgagacatgccatggccaac
tgttttgaagcactcataggagcggtatatttggagggcggtctggaggagtctaagcag
ctgtttgggaggctgcttttcaacggagaggacctacgagaagtgtggctcaactacccg
ccccatcctctgcaggtgcaggagccgcagacggacaggcagctgatcgagacgtctcca
gtgcttcaaaagctgacagactttgaggacaccatcggtgttatgttcacacactgtcgc
ctactggccagagctttcacactgaggaccgtgggcttcaaccacctcacactgggtcac
aaccagaggatggagttccttggagactccatcatgcagctggtggctacagagtacctc
ttcatccatttccctgaccaccatgaaggacacttaacactgttgcgtagctccttggtc
aacaaccgtacccaggccaaagttgcagaggagctgggcatgcaggagttcgcaatcact
aacgacaaaactaaacggccagtggccctccggaccaagacccttgctgacctgctggaa
tctttcatcgcagcgctctacatcgataaggatctggagtacgttcacaccttcatgaac
gtctgcttcttccctcgactgaaggagtttatcctaaaccaggattggaacgatcctaaa
tcccagctccaacagtgctgcctgaccctgcgcacggagggcaaggagcccgacataccc
ctctacaagaccctgcagacagtggggccgtctcacgcgcgaacctacactgtggctgtg
tacttcaaaggagagagaataggctgtggcaagggcccaagtatccaacaggcggagatg
ggagctgctatggacgcactcgagaaatataacttccctcagatggctcatcagaagcgc
ttcatcgagcggaaatacagacaggagctgaaagagatgagacgagagagggatcgccag
gagaaggagggagacgagccagaggacagcaggaagtaa
DBGET
integrated database retrieval system
