Salmo trutta (river trout): 115154048
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Entry
115154048 CDS
T08542
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115154048
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Major cadherins
115154048
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
115154048
NCBI-ProteinID:
XP_029555735
Ensembl:
ENSSTUG00000009305
LinkDB
All DBs
Position
2:31211366..31380020
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AA seq
806 aa
AA seq
DB search
MGDRHHHHPGGGRPVYTLLLSIGLALLALLSEAQGRMDRAKTEEESGAGLLRRVKRGWVW
NQFFVLEEYTGQEPLYIGKLHSDMDLGDGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYLLRAQAWNRQTDRPLEPESEFIVKIQDINDNEPKFLEGPYQATIPEMSSIGTE
VIRMTATDADDPTYGNSARVVYSILQGQPYFSVEAKTGVVRVSLAGMDREVRENYSVIIQ
AKDMGGQLGGLAGTTVVNITLSDVNDNPPMFDQKLYQMSVPELAPVSSVVGRIRAKDRDI
GINAEMRYSIIDGDGRDTFDINTDPTNLFGIITIKKPLNFETKASYTLKIEGANTHLDHR
FPDKGPFSHVTIVHVSVEDVDEPPEFSSAAYYIEVPEDTEISTVFMTVSARDPDAANTSI
RYSIERNTDLGKYFYIDITSGALMTVLPLDREEFSWHNITVLAMEMNNPRMIGSVSVAVK
ILDVNDNPPLLTQYFEAFVCESANAGQLIQTVTAVDADDPLGGHHFYYSLALEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDGEQPVQTSTSTLTIRVCSCDVEGNV
MSCNAEAYHLPASLSRGALIAILACIFVLLVMVLLMFSLQSHRKKPYLHDEEDNVHENIV
RYDDEGGGEEDTEAFDIAAMWNPREAHLVGKQRQDMLPEIESLSRYVPLASVGGPGSGCG
GGDSNVQGYVLAKLLETDLNPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSNTDHEYDY
LNDWGPRFKKLAEMYGVLETNNPSIW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcgacatcaccaccatcctgggggtggtaggcctgtctacaccctcctactc
agcataggtctggccttgctggccctgttgtctgaggcccagggccgtatggatagagcc
aagacagaagaggagagtggagcaggactgttgaggagggtgaagagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggacaggagccgctgtacattggaaagctc
cactcagacatggacctaggggacggctccatcaagtacatcctgtcaggcgacggtgcg
ggcaccaccttcaccattgacgacagtacaggcgacatccatgctatcaaaaggctggac
cgtgaggtgaaggcccagtaccttctgcgagcccaggcctggaacagacagacagatcga
cccctggagcctgagtctgagtttatcgtcaaaatccaggatatcaatgataatgaacct
aagttcttggaagggccctaccaggccaccatacctgagatgtcatccatcggcactgag
gtgattcggatgacagccacagatgcagatgaccctacgtatggtaacagtgccagggtg
gtctacagcatcctacagggacagccatacttctctgtagaggccaagactggcgtggtg
cgtgtgtctctggcgggcatggaccgcgaggtcagggagaactactccgtcatcatccag
gccaaggacatgggaggccagctagggggtctggccggaaccacagtggtcaacatcacc
ctcagtgacgtcaatgataacccacccatgtttgatcagaagctgtaccagatgagtgtt
ccagagttggctccggtgtcgtctgttgtgggtcgtattcgggcgaaggaccgtgacatt
ggcatcaatgcagagatgaggtacagcataatcgacggagacgggagggacaccttcgac
atcaacacagacccaaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagaccaaggcgagctacactctgaagatagaaggagccaacacacaccttgaccaccgt
tttccagataagggcccgttcagccatgtcaccatcgttcacgtcagcgtagaggatgtg
gacgagcccccagagtttagctcggctgcctactacatagaggtccctgaggacacagag
atcagcacagtgtttatgacggtctccgctagagaccccgatgctgccaacacctccatc
aggtattccatagagaggaacactgacctggggaaatacttctatattgacatcacttct
ggggcgttgatgacagtgcttcctttggacagagaggagttctcctggcataacatcacc
gtcctggccatggagatgaataaccccaggatgatcgggagtgtgtctgtagccgtgaag
attctggacgtgaatgataaccctccgttgctaacacagtactttgaagcctttgtctgt
gagagtgccaatgctggacagctgattcagacagtgacggcagtagatgcagatgatccg
ctgggaggtcatcacttctactacagcctggccctagaggcagctaacaaccccaacttc
acccttagagacaaccaagacaacacagcatggatcctgacgcgtcgcgggggctggtct
cagcaggatcagtcagtctactaccttcctatcttcatctcagatggagagcagccggtc
cagaccagcaccagcaccctgaccatccgtgtgtgtagctgcgatgtggagggcaacgtt
atgtcctgtaatgctgaggcctaccacctcccggctagtctgagcagaggggcgctcatc
gccatactggcatgtatcttcgtcctgctcgtgatggtcctgctcatgttttccctccag
agccaccgtaagaagccctacctgcacgatgaggaagacaacgtccacgagaacattgtc
cgctatgatgacgaggggggcggagaagaggacaccgaggccttcgacatcgctgccatg
tggaacccccgcgaggcccatctagtggggaagcaacgtcaggacatgctgcctgagatt
gagagcctgtcgcgttacgttcccttagcatcagtaggcgggccgggtagcggttgtggt
ggtggagacagcaacgtccaggggtatgtgctggccaagctcctggagacggatctgaac
ccctgcgccccgccttacgactccctgcagacgtacgcctacgagggtgagggatcagtg
gctgagtccctgagctcgctgcagtctgggtgctccaatactgatcatgagtatgactat
ctcaatgactgggggcccagatttaagaaactggcagagatgtacggggttctagagacg
aacaacccttccatatggtag
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