Salmo trutta (river trout): 115154147
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Entry
115154147 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115154147
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115154147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115154147
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115154147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
115154147
NCBI-ProteinID:
XP_029555934
Ensembl:
ENSSTUG00000002265
LinkDB
All DBs
Position
19:20394541..20410768
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AA seq
288 aa
AA seq
DB search
MSYSSSRSSSRNTDCKVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYED
PRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDPNDRCYQCGENGHYAY
DCYRFSKRGGGRRSRSRSRSRSRGRRYRSRSRSNGRDRRRYKSPSYSKRRSSRSGSPARS
KSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRAASR
SRSRSRSVSRPRARSVSRSRSKSRSATTKRDSRSRSTSQRKSPTPDAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactcctcatcacgaagctcctcgcgcaacactgactgcaaggtatatgtaggt
gacctaggcaacggtgctgccaagggggagttggagcgggcgttcaactactatggacct
ttgcgcagtgtctgggtggccaggaacccacctggttttgcctttgtcgagtatgaagat
cccagagatgctgaggatgcgacgaagggcatggatggcaaagtgctctgtggtgcccgc
ataagagtggagttgtcaacgggtatgtctcgcaagtcgcgccacgaccgccccagccgc
cggcacttcgaccccaacgaccgctgctaccaatgtggcgagaatggccattatgcatat
gactgctatcgctttagcaagagggggggtggccgccgcagcaggtcccgctcacggtca
agatccaggggaaggcgttaccgctcacgcagccgaagcaacggccgcgaccgcaggcgt
tataaatccccatcatactcaaagcgcagaagcagtagatctgggtccccagcacgttcc
aagtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagt
ccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcagg
tcgtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcagagcagcaagtcgc
tcccgatctcgctcccgttccgtgtcccgccccagggcgcgcagcgtctccagatctcgg
tccaagtcccgctcagccaccaccaagagggacagtcgatccaggtctacgagccagagg
aaaagccccactcctgatgccgactga
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