Salmo trutta (river trout): 115154154
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Entry
115154154 CDS
T08542
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115154154
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115154154
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GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
115154154
NCBI-ProteinID:
XP_029555959
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Position
19:20699785..20747004
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AA seq
882 aa
AA seq
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MKGGGRGKEPPVEVSCKRPKRKCLQWHPLLSKKALDFSEEEEEDEEELEKEPLMVRETRG
PKVPCGGPMEGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAV
LEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPCHTVSNTRNKVWSFPSNSPK
GCATAKKLPKTDITPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSGATDVTK
YPDKSSLFQLAEISSSTHQPSLTDTAGKGKPLSRGDQAETWSGTSQQGKPDVPTANVKSP
LFKLAEQISSDSSQSTAPEGKQCGQSALFQLAEMCLASEAGKMETEDDTCAPHIKTETVV
EEAGVNTPDLPLSFPPSSSSMPTDASLLLLSGQAALIKKKKDASTREPAKVVDKHKSPGP
GSPKKTLNKRPSSESELESLFYTIEAVAKGAWGDTEEDMPKKKARTAAVTILVESSSPKK
RAKPKAKRPLKAKEDQRKVKDKEDDGRTELPLTVETVVNPASPKTEAKEANISSSTEPTS
PSSPPHIKHKVGERELEANADGCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGS
FRSASEEGGWTDETWAFSQMGPSNFKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYSP
LTFDKKSTIVTKKKTDISTAPEEQPLKPAKGPSPSQKNTLFHKIVSKYKDKKEKPNTLDK
DIAMRSDSPMLDSAIKATKAKPSPAPCATATLNPEAMGTSPSVPVGSQKRKARKSKITHL
VRSADGRVSPAEEDKARDLTPEQDDKPLSQDTLCNETGCYSASKQEEADRSSAPEDLPAF
FSLAALAEVAAMENIHRGQHVIGDSQKKDMAKTPVLISCADQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctccagtggaggtgagctgcaagcggcccaag
cgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttttctgaggag
gaagaggaggacgaagaagaactagagaaggagccattgatggtcagggagacccggggg
ccaaaggtgccatgcggggggcccatggagggggaagaggactcttcagagcagcgggcc
cgccggcccatgaatgccttcctgcttttctgcaagcgccaccgatcactggtgaggcag
gaacaccctcgactggacaaccgcggtgccaccaagatcttggctgactggtgggccgtg
ctggagcccaaagagaaacagaagtacaccgacatggccaaggagtacaaggatgccttc
atgaaggctaacccgggctacaagtggtgccctgccaccaacaagccagtcaagagcccc
tgccacactgtcagcaacacccgcaataaagtgtggtccttcccttccaactcccctaag
ggctgtgctactgccaagaaactgcccaagactgacatcacaccacagcttaatttcgcc
atggcagatcccacgaagatgggtggcctaagcatgctactgttggctggggagcatgcc
cttactgccagagagatttcctccagctcctcacaatctggagccacagatgtcactaag
taccctgataaatcctccctattccaacttgctgagatctcttccagcacgcatcagccc
agtttaaccgacacagctggcaaagggaagcccttgagtcggggggaccaggctgaaacg
tggtctggaacctcacagcagggaaagcctgacgtacccactgccaatgtcaagtcccct
ctttttaaactggcagagcagatctcctctgattcgagccagtcaactgcaccagaggga
aagcagtgtggccagtccgctctcttccagcttgctgagatgtgcttggcctccgaggca
gggaagatggagacagaggacgatacctgcgccccacacatcaaaactgagacagtggtc
gaggaggctggggtcaacacccctgatcttcccctctcctttcccccgtcttcctcctcc
atgccgaccgatgctagtctcctgctgctcagcggtcaagcagccctaatcaaaaagaag
aaagacgccagcaccagagagccggccaaagtggtggacaaacacaagagccctggtccc
ggctcgcccaaaaagaccctcaacaagcgaccgtcatccgagtcggagttggagagcctc
ttctacactatcgaagccgtggctaaaggggcctggggcgacaccgaggaggatatgccc
aagaagaaggctcgcaccgccgccgttaccattctggtagagtccagctcacccaaaaag
agggccaagcccaaagccaagaggcccctgaaggctaaggaagatcagagaaaggtgaag
gacaaagaggacgacggacgcacagagcttccattgacagtggagacggtggtgaatcca
gcaagccccaagacagaggctaaggaggccaatattagcagcagcacggagcccacctcc
ccttccagccccccgcacatcaagcacaaagtcggggagagggaactggaggccaacgca
gatgggtgtggctccagaaagtctgagagaagctgcaagggggcgctgtacaagaccctg
gtgtcggaagggatgctgacctcactgagggccaacgtggacagaggcaaaagaggttct
tttcgaagtgcatctgaggaaggaggctggactgacgagacctgggctttctcacagatg
ggacccagtaatttcaagaagctaaagaagtccaaatccaaagacgagaccgcgccaggt
ttggggaaactagaggaggagtttgagaagaagttcaacagcctgccgcagtacagccct
ctgacattcgacaaaaagagcaccatcgtcaccaagaagaaaactgacattagcaccgca
ccggaggaacaacctctgaaacctgccaagggtccatctccatctcagaaaaatacttta
ttccacaagattgttagcaagtacaaggacaaaaaggagaagcccaatactttggataaa
gatatagcgatgcgtagtgactcccccatgttagactcggccatcaaagccaccaaggca
aagccgagcccagccccctgtgccaccgccacgctgaacccagaagccatgggaactagc
cctagcgtgccagtgggcagccagaaaaggaaggccaggaagagcaagatcacccacctg
gtgcgctcggccgacggcagggtgtccccagccgaagaggacaaagccagggacctgacc
ccggagcaggatgacaagccattatcccaagatactttatgcaatgaaacagggtgttac
agcgcatccaagcaagaggaggcggacaggagcagtgcacccgaagacctgcctgccttc
tttagcctggctgcccttgcagaggtggcagccatggagaacattcacagaggccagcat
gtgattggtgacagccagaagaaggacatggccaagacccctgtgctcatctcctgcgct
gaccaatga
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