Salmo trutta (river trout): 115154175
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Entry
115154175 CDS
T08542
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115154175
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
ROBO family
115154175
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
C1-set
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
115154175
NCBI-ProteinID:
XP_029555993
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Position
19:22177678..22230852
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AA seq
1174 aa
AA seq
DB search
MQVGRWLLWVTWLYTWAEGSRQCQCQCACIPEPGLAEGSKTPVKEHDRHRLEHRQHRPHR
DKPHRRKGSRLRTDVVEVPPRIVHHPSDVVVKVGSPATLSCRADGTPEPSIEWLRNGQPL
EMDKLDSQSRPIVLSEGSLFFLSVVPGRRSQSHEGVYACMARNSAGKATSRNASLFIAAL
REDFRVQPSDVEVAVGEVAVMNCSPPVGHPEPNAIWRKDGVPINNTNPHYTELNGKLIIA
PAQRNDSGVYICVASNTVGVRESRAARLSVLAKPVLVLKPQDVSVGTGDNAQFYCEAKGD
PMPAVEWSREQGPLPNGRYLVNPDQSLQIHYVTPQDSGRYTCTAVNDVGVVTASAQLVVE
EAASTRQRDLHRELSDLRIALENVTVLTPTSNMSQVQWKLQSFPTQPQYLDGFEVLCRSL
LPASSDWAAKRVPLPNFQTLVGPLKRGYKYEFKVRPYGSSLYGRESNTRHLRVPETVPSA
PPQAVSITMAPDHNETVYVTWEPPPHKAHNGIIQGYQLWCVQLEEQQYLNWTVDSGTHSL
EINPLYPGKEYWVQVAAVNGAGVGVQSDPHRLVIDSQRSGAPQSDSPSMDLTQVLAVLRD
PVFIGSIGALLWCVLMVTAFCLYRRHTQSGDHLGRGHGKAKGLYRLASEDLIIKHRMAAP
DSPWISGAWRPTQSGEKYQGMWAQSQENPGFRKTKLPITAKKDPGSLDSAVPIVPDSCGV
YGTFYVDLTGNGLKTFNSPTRCPKRPHCHTTSSSHYSQHGAEAVRTAVKTTLVKDGQVLP
PAQPKMGVLKESWEKNYKRELHAVNSAPLVSSRSQALAVRGVPYKQRLSHLPPGGRSECV
KPLASSHFLHHSASLHLVDMLPTPPPLPMDDTTDTHSLTSEEGSSRSTKLMVDDGSHQSV
CAASGLRGPPSNTTGFPSYSRLSTASYCLSLDEEQDMTMTSQEVTQYLELSPKAKRRSTM
PENPPSSSLSRPFSLTPTLGYICGLLPSDQLEDRLTDDQESQPMGSLRARLQNTPLSLCS
EWEGSMWNGWGSVSEGNMANSARTSFISSSDGSFMNDANFACVLATVAAESMSGASFSDF
SPPASPLSALFHPAPDEGAECFGELDPMPVWDWSTTWVEEMEAQYRAQYPSQANAPPACD
TWGHRHADRHCEDRRATRGESSMGYDPAILVQTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttggcaggtggctgctctgggtgacctggctctatacctgggcggaagggtca
cgccagtgtcagtgccaatgcgcctgtatacctgagccgggactggcggaggggtcaaag
acaccggtcaaggagcatgaccgtcatcgattggagcaccggcagcatcgcccgcacagg
gacaagccacaccggagaaaaggttccagactgaggacagatgtggtggaggtgccccca
cggattgtccaccacccctcagatgtggtggtcaaggtaggcagccccgccaccctctcc
tgccgcgccgacggcacacccgagccctccattgagtggctccgcaatggccagcccctg
gaaatggacaagctcgacagccaatcgcggcccatcgtcctgtcggagggcagccttttt
ttcctcagcgtggtgccagggaggcggagtcagtcacatgagggcgtgtacgcgtgcatg
gcaaggaacagcgctggcaaggccaccagccgcaacgcctccctctttatcgcagctctg
cgtgaggacttccgggtgcagcccagtgacgtggaggtggctgtgggggaggtggcggtg
atgaactgcagcccgccggtgggccacccagagcccaatgccatctggagaaaagacggg
gtccccatcaacaacaccaacccgcactacactgaactgaatgggaagttgataatcgcc
ccagcccagagaaatgactctggcgtgtacatctgtgtggcctccaacactgtgggagta
agagagagcagggccgcccgcctgtctgtcctagccaaaccagttttggtgctgaagcct
caggatgtgtcggtggggacaggggataatgcccagttctactgcgaggctaaaggagac
cccatgcctgctgtggagtggagccgcgagcagggccctctgcccaacggcaggtatcta
gtgaatcctgaccagagcctccagatccactacgtgacaccacaggattctgggaggtac
acctgcacagctgtcaacgacgtgggggtggtcaccgccagcgcacagctagtggtggag
gaagctgcaagcaccagacagagggaccttcacagagagttgtcggacctgcgcatagct
ctggagaatgtgacggtgctgactccaacctccaacatgtcccaagtgcagtggaagctc
cagtctttcccaacccagcctcaatacttggatggtttcgaggtcctctgtcgctctctc
ttgcccgccagttcggactgggctgctaagagggtgccactacccaactttcaaacactg
gtcggcccactcaagaggggctacaagtatgagttcaaagtgcgtccctacggcagcagc
ttgtatggccgggagagcaacaccaggcacctgcgtgtacctgaaacggtgcctagcgcc
ccacctcaggccgtctccataacaatggcccctgaccacaatgaaacggtctatgtgacc
tgggagcctccaccccacaaagctcacaatggcatcatccagggataccagttgtggtgt
gtgcagttggaggagcagcagtacctgaactggacagtggacagtgggacccacagtctg
gaaataaaccctctgtacccaggcaaagagtactgggtccaggtggcagcagtcaacgga
gctggcgtcggggtgcagagtgacccccatagactggtcatagactcccagaggtccggg
gccccccagtcagacagccccagtatggacctgactcaggtcctggctgtgctgagggac
cctgtgttcatcggaagcattggcgccctcctgtggtgcgtcctaatggtgacggccttc
tgcctgtaccgccgccacacccaatccggcgaccacctgggacgaggccacggcaaggct
aaaggtttgtacaggttggccagtgaggacctaatcatcaaacaccgaatggcggcccca
gattcaccgtggatctcgggagcgtggagaccgacccagagtggcgagaagtaccagggc
atgtgggctcagagccaggagaaccccggcttcaggaagaccaagttgccaatcacagcc
aagaaggaccccggttccctggactcggctgtccccatcgtgcccgacagctgcggtgtc
tatgggacgttctacgtggacctgacgggaaacggcctcaagaccttcaacagccccacc
cgatgccccaagaggccccactgccacaccacctcctcctcacactactcccagcacggc
gcagaggcggtgcgtaccgctgtcaagaccacgctggtcaaggatggccaggtcctgccc
ccagcccagcccaagatgggcgtgctcaaggagtcatgggagaagaattacaaacgagag
ctccatgcagtgaacagcgcccccttggtgtcatcgaggagccaggcgctggctgtgagg
ggagtgccttacaaacagaggctcagccacctcccaccaggtgggcgctcagagtgcgtc
aagcccctggcgtcgtcccacttcctgcaccactcagcctcactgcacttggtggacatg
ctccccaccccgcccccactgcccatggacgacaccactgacacacacagcctcacctca
gaggaagggtccagcaggtctactaagctgatggtggatgacgggtctcaccagtctgtg
tgtgctgcgtccggtctccgtggccccccatccaacaccacgggcttcccctcctacagc
cgcctgtccactgcctcttactgcctgtcattagacgaggagcaggacatgacaatgaca
tcacaggaagttacccagtacctggagctcagccccaaggccaagaggcgcagcacaatg
ccggagaatcctccttcctcctccctgtcccgccctttctccctcactcccactttgggc
tacatctgtgggctcctcccctccgaccaactggaggacaggttgactgacgaccaggag
tcccagccaatgggctctctacgggcccggctccagaacacacccttgtcgctctgcagt
gaatgggagggctcgatgtggaacggctgggggtcggtgtcagagggcaacatggctaac
agcgcccgcaccagcttcatcagctcgtcggacggctcattcatgaacgatgccaacttt
gcctgcgtgctggccactgtggccgcagagtccatgagtggagcctctttctcagacttc
tctcccccggcgtcacccctcagtgccctgttccatccggctccagatgaaggagcggag
tgtttcggggagctggatcccatgcccgtttgggactggagtacaacctgggtggaggag
atggaggcgcagtaccgtgcccagtacccctcccaggcaaatgcaccccccgcctgcgac
acctgggggcatcgtcatgctgaccgtcactgtgaggaccgccgagccaccagaggggaa
tcttccatgggctatgatcctgctatcctagttcaaacagactga
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