Salmo trutta (river trout): 115154201
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Entry
115154201 CDS
T08542
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03030
DNA replication
stru03410
Base excision repair
stru03420
Nucleotide excision repair
stru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115154201
03410 Base excision repair
115154201
03420 Nucleotide excision repair
115154201
03430 Mismatch repair
115154201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115154201
03036 Chromosome and associated proteins [BR:
stru03036
]
115154201
03400 DNA repair and recombination proteins [BR:
stru03400
]
115154201
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115154201
DNA Replication Termination Factors
ELG1-RFC complex
115154201
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115154201
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115154201
Check point factors
HRAD17(Rad24)-RFC complex
115154201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
nSTAND_NTPase5
AAA_22
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_11
RCF1-5-like_lid
Rad17
RuvB_N
AAA_19
MipZ
AAA_24
nSTAND3
AAA_assoc_2
AAA_18
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
SLFN-g3_helicase
MeaB
NTPase_1
RNA_helicase
DNAX_ATPase_lid
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
115154201
NCBI-ProteinID:
XP_029556056
Ensembl:
ENSSTUG00000015293
LinkDB
All DBs
Position
19:complement(25275856..25281273)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVAMNEVDSEQIQTEVQPKKDEAPAKLSSSGYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLRDEQIMMRLLEVVERENLVTSNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDDAYKIIEQLWALGYSPEDIIGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTATPDTS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgatgaatgaggtagattctgagcaaattcaaacagaagttcaaccgaag
aaagatgaggcccctgcgaagttgtctagtagtggatatgagcttccatgggttgaaaaa
tacagacccttgaagttgaatgaaatagtaggcaatgaggagactgttagcagattggag
gtgtttgccagagagggaaatgtgccgaacatcattattgcaggtccccccggtacagga
aagaccaccagtattctgtgtttggcgcgagctcttctgggcccagccatgaaagatgct
gtcctggaactgaacgcctccaatgacagaggcatcgatgtagttcgaaacaagatcaag
atgtttgcccagcagaaagtcaccctccctaaagggagacacaagatcatcatcctggat
gaggctgacagtatgacagacggagcccagcaggccttgaggaggaccatggagatatac
tctaaaaccacacgcttcgctctggcatgcaacgcctccgacaagatcatcgagcccatc
cagtcacgttgtgcagtcctgcgctacaccaagctgagggacgagcagatcatgatgcgt
ctgctggaggtggtggagagggagaacctggtcaccagcaacgacggcctggaggcaatc
atcttcaccgcccagggagacatgagacaggcgctgaataacctacagtccacaaattct
gggtttggctacattaacagtgagaatgtgttcaaggtgtgtgacgagccacaccccctg
ttggtgaaaagcatgctggaacactgtgtcaatgcaaacattgatgatgcttacaagatt
attgagcagctgtgggccctgggttactcccctgaggacatcatcggtaacatcttcaga
gtgtgtaagactttccagatgccggagtatctcaagctggagttcataaaggagataggc
tacacccacatgaaggtggcggagggcgtgaactctctgctgcagatggcaggcctcctg
ggtcgactgtgcagcaagacagccaccccggataccagctaa
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integrated database retrieval system
