Salmo trutta (river trout): 115154263
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Entry
115154263 CDS
T08542
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115154263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115154263
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115154263
Protein recycling
Other Rab GTPase associated proteins
115154263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Rep_N
Gemini_mov
Motif
Other DBs
NCBI-GeneID:
115154263
NCBI-ProteinID:
XP_029556162
Ensembl:
ENSSTUG00000005319
UniProt:
A0A673WPZ2
LinkDB
All DBs
Position
19:complement(27028751..27060852)
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AA seq
505 aa
AA seq
DB search
MSQWMVRRGIHMDQSELLCNKGCGYYGNVAWQGLCSKCWREEYQRARQKQIQEDWALAEK
LQKEEEAAYASIQGAQSQPPSQPQAQPQASLAPFSKFEERKTNEKTRKVTTVKKFFSPSS
RTAPKKENQEGKIPSPSIRRQSSIETDRVSRDFVEFLKTLQKPGREVHKQSSAFIEIMAN
KKDLGADELSECVQDFYQNMSDRLMTNFKGSSERVEQVMDEVEMYIMTRLYKSVFCPETT
EDEKKDLATQNRIRALHWVDIQMLCVPVDEEIPAVSDNVVKAITDVIEMDSKRVPRDKLT
CITRCSKHIFSAIKITKSEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPGRLMT
GEDGYYFTNLCCAVAFIEKLDAQSLNLDPVDFERYMSGQASPRRPQVDSGWPQMDTAASI
PALAQVNQNLDLLSGLGSRQERVLEGARSMQSDLITWQESVEREVQEILEKYPLEIRPPA
LSAIDSDNMENDRLPLPLTPQVFAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtggatggtgcgccgcgggatccacatggaccagtcggagctgctctgcaac
aagggctgcggttactatggtaacgtggcctggcagggcctgtgctccaagtgctggcgg
gaagagtaccagcgagcccgacagaagcagatccaggaagactgggccctggctgagaag
ctgcagaaggaggaggaggctgcctatgccagtatccagggggcccagtctcagcccccg
tctcagccacaggctcaaccccaggcctctcttgcccccttctccaagttcgaggaaagg
aagaccaacgaaaagacgcgcaaggtgaccaccgtgaagaagttcttcagtccctcgtca
cggacagcccccaagaaagagaaccaggagggcaagatccccagcccctccatcaggcgc
cagtccagcatcgagacagaccgcgtctccagagactttgtggaatttctgaagaccctg
cagaagccaggccgagaagtccacaagcagagcagtgccttcatcgagatcatggccaac
aaaaaggacttaggtgctgatgagctgtctgagtgtgtccaagacttctaccagaacatg
tccgaccgcctcatgaccaattttaaaggctcttcagagcgtgtggagcaagtgatggac
gaggtggagatgtacattatgactcgcctgtataagagcgtcttctgtcccgagaccaca
gaggatgagaagaaagatctggccactcaaaacaggatacgggcgttacactgggtggac
attcagatgctctgtgtgccagtggatgaggagatcccagcagtgtcagacaacgtggtc
aaagccataacagacgtcatcgagatggactccaagcgggtaccaagggacaagctaacg
tgcatcacgcgctgcagcaagcacatctttagcgccatcaagatcaccaaaagcgagcca
gcctcggcagacgacttcctgcccaccctaatctacatcgtactgaaggccaacccacca
cgcctgcaatccaacatccagtacatcacccgcttctgcaaccccggcaggctcatgact
ggagaggacggatactacttcactaacctgtgctgtgcagttgccttcattgaaaaactg
gacgcccagtccctcaacctggaccctgtggactttgagcgctacatgtcgggccaggcc
tcccctcgcaggccacaggtggacagtggctggccacagatggacactgctgcttccata
cccgccctggcccaggtcaaccagaatctggatctcctgtcaggcctggggagccggcag
gaaagggttctggagggggcgcggagcatgcagagtgacctgatcacctggcaggagagt
gtggagcgagaggtgcaggaaatcctggagaagtacccgttggagatccgcccacctgcc
ctctctgccatcgactcggacaacatggaaaacgaccggctgccgctgccactgacgccc
caggtgtttgctgggtaa
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