Salmo trutta (river trout): 115154268
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Entry
115154268 CDS
T08542
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115154268
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
115154268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115154268
NCBI-ProteinID:
XP_029556176
Ensembl:
ENSSTUG00000005655
LinkDB
All DBs
Position
19:complement(27180019..27383503)
Genome browser
AA seq
1544 aa
AA seq
DB search
MAANAGSMFQYWKRLDLQQLQRELNATATALANRQDESEQSRKKLIDQSREFKKNTPEDL
RKQVAPLLKGFQAEIDAVSKRSKESEAAFLNVYKRFIDVPDPVSALETAQQLQLKVQRMH
DIETENQKLRETLEGYTQEIAEVKNHEVTIKALKEKIEEYEETLSKQAKELGQEERRGGE
KEAKEGQLHNDHAEEESQQQENQESVVSKLEEANHKAQSLQTALEATQTELLELKSKYDE
ESTAKADEIEVVMSDLKRANQRAEEAEREAEALREQLSSANKSLQLATQIQKAPDMEQAL
EVLSRSSLEVELSAKEREVLQLAEDVQRLQASLANIRENSASQISQLEQQLSTKESLLKQ
LEEKLREQADYEAIKKELSILKSMEFGSSNFSSAQDSKKPLEMLLKSRGLQSESSSLRLN
NSEPSGVRERKVKDSPEGQQRLPATPMGTNLQGSPPPPSSQLLLRTGSGGSSDTTPVTTA
NGTHHFSPTGGGLGGQDFFSPSSLASAGTAFPLAGKVSLNSLLQRQLMQTFYSKALQDSV
SGQALLFSPAHYPTPNSLSASPLPPHQSLQSQSQHPSAGSPDVNGLAPSPSQSEGAGSVS
EGEDMDTSEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEP
FHKMRQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRAGNITTRIR
TPESGSDEAIKSILEQAKRELQVQKADGVDNRQRRQTGYPRGMGNYFAKYAQSLRLVSLP
AVDSSQTPPSSSIGGGGSIGSGGSSSSDETIRSILEQARREMEAQQAALEPILKPSSMGP
SDLALLSPKLLGASTLPASYSPLALSLKKPSIPPSSSPSSLLDFHSAMVKEAGTVVVGEG
GGGGGSLMDGGTKQGRGSWRDQWWNSMHPGGRGVTSSMNDDARSQEDSKEKPPRLAGSSS
ALAPFSSSVSISSPDCWKDWPRAESPYSQADSEPGGGTNTQGPSRANTPQSSPSPLPLSL
SLGPLGSLLTPAAKPVKPVVAPLTPEQYEVYMYQEVDTAELTQQVKDKLAKNGICQRIFG
EKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQENTPK
SSASCSPAPESPLSSAEESVKSLGEQVGGEGCGGGGGLSQFPPREPSEPSESQPGTPLPV
PGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARP
KPWHKLSLKGREPFVRMQLWLQDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQTADSGGL
SGGDFSQGGSPQHGLGHHLHQQQPPQQHLKKARVVLAPEEKEALKRAYQQKPYPSPKTIE
ELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQRGEGGEGVSPSTRAGKASEGDSCDGT
ESDGTVEGTRPGHEHHPASEGEWGSDHRDEGTTLATGSTAAGTSGSLFSFPEISHVSSVS
LAATAAARNPRDNSLRKKKAANLNNIIHRLEKAASKDEPHEWEF
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcgatgtttcaatattggaagcgcttagatttacagcagctg
cagagagaactgaatgccacagccacagccctggccaacagacaagatgagagcgagcag
tccaggaaaaagctaatcgaccagagccgcgagttcaagaaaaacacaccagaggatctg
cgaaagcaggtagctccattgctaaagggcttccaagcagagatcgacgcagtgagtaaa
agaagtaaggagtcagaggctgccttcctaaacgtgtacaagagattcatcgatgtccca
gaccctgtgtcggccctggagactgcccagcagctacagctgaaggtccagaggatgcac
gacatcgagacggagaaccagaagctccgcgagacgctggagggctacacccaggagatc
gctgaggtcaagaaccacgaggtcacaattaaagcacttaaggagaagatagaggagtat
gaagagaccctgagtaaacaggccaaggagctgggccaggaggagaggagagggggagaa
aaggaggcgaaagaggggcagcttcacaacgaccatgcagaggaggagagtcaacaacag
gaaaaccaggagtctgtggtgtcaaagctggaggaggcaaaccataaggcccagtcccta
cagacagcacttgaagcaactcagacagagcttttggaactgaagagcaagtatgacgaa
gagtcgacagcaaaggccgatgagattgaagtggtgatgtcagacctgaagagagccaat
cagagagctgaggaagcggagagagaagcagaggctcttcgggaacagctgtcgtccgcc
aacaagtccctccagcttgccacacagatccaaaaggcccctgacatggagcaggccctg
gaggttctgtcgcgctccagtctggaggtggagctaagcgccaaggagcgggaggtgctg
cagctagccgaggatgtgcagagactgcaggctagcttggccaacatccgggagaattct
gcctcgcagataagccagctggagcagcagctcagtaccaaggagagcttactcaagcaa
ctggaggagaaactgcgagagcaggcagactacgaagccatcaagaaagagctcagtatc
ctaaagtccatggagtttggctcttcaaacttctcctcagcacaggactctaagaagcct
ctggagatgttgttgaagagtcgaggcctgcagtctgagagctcctccctgcgcctaaac
aacagtgagccgagtggtgtgagggagcgaaaggtcaaagactcaccagagggtcaacag
cgtcttcctgccacgcccatgggcaccaacttgcagggctcccctccccctccctcctct
caactcctcctgcgcactggctcaggtggttcctccgacaccacccctgtcaccaccgcc
aatggcacgcaccacttctcgcccacgggcggcgggctgggcgggcaggacttcttcagc
ccctcctcgctggcgtcggcaggcaccgctttccccctggcgggcaaagtgtcgcttaat
tccctgctgcagcgccagctcatgcagaccttctactccaaagccctgcaggactcagtg
tctggccaggccctgctcttctcccctgcccactacccaacccctaattccctctcagcc
agccctctgccaccccatcagtcattgcagtcgcaatcccagcatccgtcagcgggcagc
ccagacgttaatggcctagccccctcgcccagccagtcagagggtgcagggagtgtctcg
gaaggtgaagacatggacacatctgagatagcgcgtcaggtcaaggagcagctgatcaag
cacaacattgggcagaggatcttcggccactacgtgctggggttgtcccagggctcggtc
agtgagatactggctaggcccaagccctggagcaagctgaccatcaggggcaaggagccc
ttccacaagatgaggcagttcctatctgacgagcagaacatcttggcactgcgcagcatc
caggggaggcagagagagaacccaggccagaacctgaacagagtgtttcaggaggttccg
aagcgaagaaccggctccgaaggctcctcgagggcaggtaacatcaccacgcggatccgt
actccggagagtgggtcagacgaggccatcaagtccatcctggagcaggccaagagagag
ctgcaggtccagaaggctgatggtgtggacaacagacagcgacgacagacaggttacccc
cgaggcatgggcaactatttcgcaaaatatgcacaaagtctcagactcgtctctctccct
gcagtggactcgtctcagacccctccctcgtccagcattggtgggggtggtagtatcggc
tcaggtggatcctccagctcagacgagaccatccgctccatcctagagcaggcaaggagg
gagatggaggcccagcaggccgccctggagcccatcctcaagccctcctccatgggcccc
tctgaccttgccctgctctctcctaaactcctgggcgcttccactctcccggcctcctac
tcacccctggccctctccctcaagaagccctccatccccccatcctcctcgccctcctcc
ctcctggacttccactctgccatggtgaaggaggcaggaacggtggtggtgggagaaggc
gggggaggaggagggtctctaatggacggagggaccaagcaggggcggggctcctggagg
gaccaatggtggaatagtatgcaccccggggggcggggagtcacgtctagcatgaacgac
gacgcgcggagtcaggaggacagcaaggagaagcctccccggctggccggctcgtcctcg
gcgctggcccccttctcctcctccgtctccatctcctccccggactgctggaaggactgg
ccccgggccgagtccccatactcccaggctgactccgagcccggcggaggcaccaacacc
caggggcccagccgcgccaacaccccccagagcagcccctctcccctgcccctgtccttg
agcctggggcccctgggttccctgttgacacccgcagccaaaccagtcaagccagtggtg
gcgccgctcacgcctgagcagtacgaggtctacatgtaccaggaggtggacacggccgag
ctcacgcagcaggtcaaggacaagctggccaagaacggcatctgccagcgcatctttgga
gagaaggtgctgggcctgtctcagggtagtgttagtgacatgctgtccaggcccaagccc
tggagtaagctgacccagaagggccgggagcccttcatccgcatgcagctgtggctcaat
ggagagctgggccagaacgtcctgcccttacagggccagccacaagagaacaccccaaag
agctcagccagctgcagcccagcaccggagtcacccctcagctcggccgaggagtcagtg
aagagcttgggggagcaggtgggaggagagggatgtgggggtggaggagggttgtcccag
ttcccccccagggaacccagcgagccctctgagtcccagcccggcacaccgctgcccgtc
cccggtcactcaggtctcagcatccaggagatggtggccatgtccccggagctggacacc
tacgtcatcaccaagaaggttaaggaggtgctgacggataacaacctcggtcagcgtctg
tttggggagaccatcttgggtctgacccagggctcggtgtctgacctgctggcgaggccc
aagccctggcacaagctcagtctgaagggacgtgagcccttcgtccgcatgcagctctgg
cttcaggatccacgcaacgtggagaaactcatggacatgaaacgcatggagaagaaagcc
tacatgaagcggcgccacagctcggtgagcgagagccagacggcggacagtgggggcttg
tcggggggagacttcagccaggggggcagcccccagcacggcctcggccaccacctgcac
cagcaacagcccccccagcagcacctgaagaaggctcgtgtggtgctggcccccgaggag
aaggaggccctgaagagggcctatcagcagaagccctacccctcgcccaagaccatcgag
gagctggcgtcacagctcaacctcaagactagcaccgtcatcaactggttccacaactat
aggtctcgtatccgacgggagctgttcattgaggaaatccagcgaggtgagggcggggag
ggtgtctccccatccaccagagcgggcaaggccagcgagggcgacagctgtgacggcacc
gagtcggacggcacggtggagggcacacgccccggccacgagcaccacccagcctcagag
ggcgagtgggggtccgaccacagggacgagggaaccaccttggccactggcagcactgcc
gcaggtaccagcggcagcctgttcagcttccccgagatcagccatgtttcctctgtgtcc
ttggctgctaccgccgctgcccgcaacccccgcgacaacagcctgcgcaagaagaaagcc
gccaaccttaataatatcatccaccgtctggagaaggccgcaagtaaagacgagccccat
gagtgggagttctaa
DBGET
integrated database retrieval system
