Salmo trutta (river trout): 115154310
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Entry
115154310 CDS
T08542
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115154310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115154310
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115154310
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
115154310
NCBI-ProteinID:
XP_029556256
Ensembl:
ENSSTUG00000011165
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All DBs
Position
19:complement(29605918..29627579)
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AA seq
804 aa
AA seq
DB search
MSKSKAPEYPSFSLETDDRTDDERAQSRQMKKPDRLVSALGLGSSGVPKAPMDSDYQDEL
EEAAPKIRFNLNFDKEVRCLEENKEDRVSKRFDIKRLFEAVSTGDVMKLEGLHQYLHQSM
KKLSNTEYQSYGKNVLLKALLNLRKGRNNTIEYLLDISEKMGDIKEFVNAAYTDSYYKGQ
TALHIAIERRSIYFVELLIKKGANVQAKACGKFFQAHDGPSFYFGELPLSLAACTNQPEV
VDFLLENDYQRVDVRESDSLGNMVLHALVVLADNTPENTDFITSMYDHILTTTARLHPKW
RLEDIENNQGLTTIKLAAKTGKIGLFKHMMHREFQERETRHLSRKFTEWVYGPVHSSLYD
LASLDSYEKNSVMEIIVYSSDIPNRHEMLQIEPLNRLLEEKWDKFAARMFFLNFLVYLVY
LSVFTAVAYNRKKGTPPFTLEHTRQEYLRLAGQLFITVGACYFFIRGILDLKRKRPSLDT
LLIDGYSEILFFLQAIFFLASLVLYCCGREEYLGFLVLCLALSWVNLLYFSRGYRHMGIY
SVMIQKMILSDILRFLFVYVTFLFGFSAAVVTLLMEPELPANNTAQPINSTDGKGRTLFL
PTEDSCIKPTFRNISHTIMELFKFTIGMGDLEFTEGYQYKEVFYMLLISYIVLTYILLLN
MLIALMSLTVEKMSLESTSIWKLQRAITILDLERSLPRCLRRRLRSGVDKDLGTRAGEKD
RRWCFRVEEVNWNKWNTNLGIINEDPGSGDTARLSPSHSSRTLGKERSWRGFLGNVSRRQ
HTQPQQQTQVESTEMSSLSPLSHV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcaaaggccccagagtacccttccttctctctggagacggatgacaggacg
gatgatgagagggcacagagcagacagatgaagaagcctgaccggctggtgtctgcccta
ggcttaggcagttcaggggtgcccaaagcccccatggactcagactaccaggatgagctg
gaggaggccgctcccaagattagattcaatctcaattttgacaaggaagtacgatgtttg
gaggagaacaaagaggacagggtcagcaagaggtttgacatcaagaggctgtttgaggcc
gtgtccactggtgacgtcatgaagctggaagggctgcatcagtacttgcatcagtccatg
aagaagctctccaacactgagtatcaatcgtatggtaaaaacgtcctgctgaaggctcta
ctgaatctgagaaaaggcagaaataacacaattgaatatctccttgacatctcagagaag
atgggggacatcaaagaatttgtaaatgctgcatacacagacagctattacaaaggtcaa
acagcccttcatattgccattgagagaaggagcatctattttgttgagctattgatcaag
aaaggagcaaacgtccaggccaaagcctgtgggaaattcttccaggcccatgatggaccc
agcttctactttggtgagctgcctctgtctctggctgcatgcaccaaccagcctgaggtg
gtggacttcctgctggagaatgactaccagagagtggacgtgagggagagtgattccctg
ggtaacatggtgttgcatgccctggtggtgttggctgataacacaccagagaacactgac
ttcatcacctctatgtacgaccatatcctcacaacaactgcccgcctgcaccctaaatgg
aggctggaggacatagagaacaaccagggcctgacgactataaaactggctgccaagact
ggcaagatcgggctgtttaagcacatgatgcatcgtgagttccaggagagggagaccaga
cacctgtcccgtaaattcactgagtgggtttacggacccgtccactcctccctgtatgac
ctggcctcactggactcctacgaaaagaactctgtcatggagatcatcgtctacagcagt
gacattcctaatcgccatgagatgctgcagattgagcctctgaacaggctactggaggag
aagtgggacaagtttgcggctcggatgtttttcttaaacttcctggtttacctggtttac
ctctccgtcttcactgctgttgcctacaacaggaagaagggaacgccaccttttactctg
gaacataccagacaggagtacctgcgactcgccggtcagctttttataactgtgggagcc
tgctatttcttcataagagggatattagacttgaagagaaaacgtccaagcctggacact
ttgctgattgacggatacagtgaaatccttttttttctgcaggcgatcttcttcctggcc
tccttagtgctgtactgctgtggtagggaggagtacctggggtttctggtgctgtgtctg
gctctcagctgggtcaacctgctctacttctccaggggatacagacacatgggcatctac
agtgtcatgatacagaagatgatcctaagtgatatcttgcgctttctctttgtctacgtt
accttcctctttgggttttcagcagcggtggtcactttgctgatggaacctgaattgcca
gccaataatacagcacagccaataaacagcacagatggaaaaggtcgtacccttttcctt
cccactgaggattcgtgtataaaacccaccttcaggaacatctctcacactatcatggag
ctgttcaagttcaccatcggcatgggagacctggagttcacagaggggtaccagtacaag
gaagtgttttacatgctgctaatctcctacatcgtgctcacctacatcctgctgctcaac
atgctcatcgccctcatgagcctcactgtggagaagatgtccctggagagcaccagcatc
tggaaactacagcgggccatcaccatcctggatctggaaaggagcctgcctcgctgcttg
agaaggaggcttcgttctggggtggacaaggacctggggaccagggctggagagaaagac
cgccgatggtgcttcagagtggaggaagttaactggaacaaatggaacaccaacctggga
ataatcaatgaggatccagggagcggagatacggccaggctgtccccttcacacagcagc
agaacgctaggcaaagagaggagctggcgggggttcctgggaaatgtcagtcgaagacaa
catacacagcctcagcaacaaacacaagtagagagcacagagatgtcctctctgtctcct
ctcagccatgtctga
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