Salmo trutta (river trout): 115154316
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Entry
115154316 CDS
T08542
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115154316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115154316
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115154316
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115154316
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
115154316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
115154316
NCBI-ProteinID:
XP_029556267
LinkDB
All DBs
Position
19:29722444..29824100
Genome browser
AA seq
2481 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPSHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQADGHEALEAKRPRMETVSEAHFARGALPGGI
ILSLQSHQVQDSLRANVGEVKKETQFSGMKAESQAPGGLHHVGEVPDSSPSRLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERIENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLTDDPMKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNHQITRSSQEEKSDDKPEEDKLEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAE
PPPPEPLLPSEPPQPSKPEPTTQKAVREPTKSAPGEPPMDLNRGGGAAAANGETGETSRW
TEEEMEVAKKGLVEHGRNWSAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRR
ARGDRDPSQSESMASADDDQNPEDSDGGENSSDTESAPSPSQADPSKAGGDSQRGDGAGG
SENQWSDKGQASNGRVQEPSYGELRVKLEKSPEGEAREPGSQEDGERARVAYEGHGHPKS
EPQDVDMKPGGSGEVQVKVEPDSAKEKGEPEKQREGHHSDNDSSATCSADEDVDAEPERQ
RIFSSMDKPSLLSPPSSVLMSTTKQAHLNMQQLQQRAAAIPPMVVPFGPGGISIGAPLSG
FAMFQHQITAVHESAHAEEKQRQDQADPERSRQPSNCFTTHSPTIVDREGKPFPYMPYDM
KMALEQEAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGV
RVTFSRHSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEGAKS
SVGSISLGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSRTQYEGVVRGGPMDGGISRGNP
ARGSITQGTPALSGSSIAADLLKGTITKLPTEDLSSPEKAREQLAKGHVIYEGKSGHILS
YDAPVSVAIKNPREATHSPRTGHELKRSYDMMEVARGHPGREGAPFEGLISRALPRDSPH
GDSKERPMMTGSIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNT
IKEMGRSIHEIPRQEQPGQDPRKTPDMAANIRASMEGSISQGHPLSQSAIKHNVKSLITS
PSRLPHGHTMPPLEAMERAKYEESKAAAEQRARHTSVVNSATSVLRSTHQEQGKSQLSPG
MYQDADARRTPVNYSTSSMSRGSPMLGRGQEGSGKPASHDRKSTMTPTQRDSVPAKSPVS
GGDPNHPMASHSPFDPHHRPMAPGEPRFHLPPHLDPALFHRAVLDPAAYMFPRQPSPTGY
HNTYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQPIALSYPPGARGIIDL
AQMPPTILLPHPGGTGTPTLDRITYIPGAQPPFPPRPFNQASISPGHQAHLAATAAVNQE
RERERERERERDREHREKEREREHREREQEQRQRERERAVAAAVANDYMRGGPGQPDRPG
SRGYLRSPSPSMRSQEAQQQRPSIFQGANSKGVITPLMPAAAAAQAGARYSTAADALAAL
VDAAASAPQMDVNKGKDSSKHDRDDDMSLSSSVARRQHEQQQEADRRSMQSPYGPMSLPG
GKLHPGYTEGPSGPQGSKDKGPPSKSRIEEELRTRGKTTITAANFIDVIITSQIASDKDS
RERGSQSSDSSSSLSSSRYEIPSGGAIDVISPANSPAQSQQQQQQDDRDRADRERADRDR
ADRDRAAQAAVQAAGMRPFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADH
ISHIITQDFARNQDPPQSSTTISSSATTTFQSAQLPVSILGPGGRAKGPSRYSPENQAQV
SSHHQRQTPSRVSPDNAPDKPRARPGKSPDRGGRGAMESYEPISPPQSYQDKQQEAREQQ
QPQRREADQPEMRGDSRSPGSVSYLPSFFTRLENTSPMVKSKKQEIIRKLNSSGVSDSDV
GNAQPGTEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQEGP
QPSSNTPSNEARQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYAAAGGERPSSVSSVHS
EGDYHQQPPAWSWEDRPSSTGSMQFPYNPLTMRMLSSTPPSSIQAQQPPPGGPLGPQQQQ
RVWEREPLLSEQYETLSDSDD
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctatccccctacacagggcagcttcagcagtgagcagagccgc
tacccatcacactctgtccagtacaccttcagcaccacacgccaccaacaggagttcacc
gtcccggactacagaggtcacctgcaggaccagcaaggtcgacgaaggccttccttgctt
tcggaattccaccctggaactgagaggcccccagagagacgtcatggctacgagcagcag
ttccacagtgtcacctcccagcagcaggctgacggccacgaggctctggaggccaagcgg
ccccgcatggagactgtctccgaggcccacttcgcccgcggtgccctgcccgggggcatc
attttatccctgcagtcccaccaggtccaggacagcctcagagccaacgtaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtcccaggccccaggagggctgcac
catgtgggggaggtgcctgacagctcgccctccagattgtccaaggaggagctgatccag
agcatggaccgtgtggacagagagatcgctaaagtggagcagcagatcttcaagctgaag
aagaagcagcaacaactggaggaggaagcggcaaagccagtggagccagaaaagccagtg
acccctccccccataccacaggaacacaacaagcatcgcagcattgtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataagatattcgaaggtcttggtcctaag
gttgaactgcccctatataatcagccatcggatacaaaagtttaccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctatgaccagctgatggaggcgtgggagaag
aaggtggagcgaatagagaacaacccgcgtcgcaaggccaaagatagccgcaccagagag
tactatgagagacagttccccgagatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccattgccagaagcgagcatgagatt
tctgaaatcatcgatggcctttctgaacaggagaataacgagaagcagatgagacagctg
tccgtcatcccacccatgatgtacgacaccgagcagaggcgagtcaggttcatcaacatg
aacggcctgacggatgaccccatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagatcttcaaagaaaagtttgttcagcacccaaaaaattttggc
ctcattgcttcttatctagagagaaagtgtgtgtccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacactggtgagacgcaactacggcagacggcgaggg
agaaaccatcaaataacacgatcctcacaagaagaaaagtctgacgataaacctgaagag
gacaagttggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggaaaagacaaagacaagtgtgacggcggggag
gacgaggacggtaaggagcagagcacgccacgcggcaggaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaatgaagctgcctctgtggcggag
ccaccgccacccgagcctctcttgccctccgagccccctcagccttccaaacctgagcct
actacccagaaggctgtgagagagcccaccaaatctgcaccgggtgagccccccatggac
cttaacagaggaggaggagctgctgctgcgaacggcgaaaccggagagacttctcgctgg
accgaggaggaaatggaggttgccaaaaaaggccttgtggagcacgggcgcaactggtca
gccattgccaagatggtgggcaccaagagcgaggctcagtgcaagaacttctacttcaac
tacaagagacggcacaacctggacaacttgctccagcagcacaagcaggacacacggcgg
gcacggggagatcgagacccgtctcagagcgagagcatggcttcagctgacgacgaccaa
aacccagaggatagtgatggtggagagaacagctcagacacagagagcgccccgtccccg
tcccaggcggacccctccaaggccggaggggattcccagaggggagacggagctggaggg
tcagagaaccagtggtccgacaagggccaggctagcaatgggagggtccaggagccctcc
tacggggagctgagggtcaagttggagaagagccccgagggagaggccagagagcctggc
tctcaggaggatggggagagggcccgggtggcctatgagggccatgggcaccccaagagc
gagccccaggatgtggacatgaagcctggggggtccggggaggtgcaggtgaaggtggag
cctgactctgccaaggagaagggggagccagagaagcagagggaggggcaccactcagac
aacgactccagcgccacctgcagcgccgacgaagatgtagacgctgagcccgagagacag
aggattttctctagtatggacaagccttcgttgctcagccctcccagctcagtgctgatg
tccacgaccaagcaggcccacctcaacatgcagcagctccagcagcgcgccgctgctatc
ccgcccatggtggttccttttggtcctggcggaatttccataggagcccccctcagcggt
ttcgccatgttccagcaccagatcacggctgtgcacgagtcagcccacgccgaggagaaa
cagaggcaggaccaggctgaccccgagcgcagcagacaaccctccaactgcttcaccacc
cacagccccaccatagtggacagggagggtaagcccttcccctacatgccttatgatatg
aagatggctctggagcaggaggcccagtctggtcggccaggctctccctacaggctctct
cccagggacatgagcaaggcctctcctcagcccaacgaccccaacgcctcccgctacagc
gtgcctccagtgctccagccagctcccaaccaggtggtccagagcctgcctgatggagtc
cgtgtgactttctccagacacagccgacccgccaacattccatctcctcctccgctcatt
ccaacctccaaacccacagacaagccttcctttatccagggtggctccatctcccagggg
actcctggtacgtacctgccatctcatgctgtctacggtggcccagagggggcaaagagt
tctgtgggctccatatccctgggcctgcccaggcagcaggaccccaccaagcctgtgtcc
tacattaagcaggaggagtgttctccgcgtggccagtctgagggactcctctctcggacg
cagtatgagggggtagtcagaggaggcccaatggatgggggtatcagcaggggaaaccca
gccagaggatcaatcacacagggcacgccagccctgtccgggtccagcattgcagctgat
ctgctgaagggcaccatcaccaagctgcccacggaggacctgagcagcccagagaaggct
cgggaacagctggccaagggacacgtcatctacgaaggcaagagtggacacatcctctcc
tacgacgctcctgtctccgtagccattaagaacccaagagaggccacgcatagccccagg
acaggccatgagctcaaacgctcctatgatatgatggaggtcgccagaggccaccccggg
agagaaggagcccccttcgaagggttgatcagccgagccctgcccagagacagtccccac
ggggactctaaggagaggcccatgatgactggatccatcatgcaaggtacacccagaacc
tctgcagaggcctatgaggagagcatgaagtacggcaagcagataaagagggagagtcca
cccatccggtcctttgagggggggataggtaagggtaagccctacgagggggtgaacacc
attaaggagatgggccgctccatccacgagatcccccgccaggagcagcctggacaggac
ccccgcaagacccccgacatggctgccaacatccgagcctccatggagggctccatatcc
cagggccatcctctgagccagtcggccatcaagcacaacgttaagtccctgatcaccagt
cccagtaggctgccccatggtcacaccatgcccccgctggaggccatggagcgggccaag
tatgaggagagcaaggcggcagcggagcagcgagcgcgccacacctctgtggtcaactcg
gcaacctccgtcctgcgttccacccaccaggagcaaggaaagtcccagctcagcccgggc
atgtaccaagatgccgacgcccgcaggaccccggtcaactacagcactagctccatgtcc
agaggctcgccaatgctgggccgaggacaggagggctctgggaagcctgcatcccatgac
cggaagagtaccatgacccccactcagagggacagtgttccagccaagtctcctgtgtca
gggggtgaccccaaccaccctatggcctcccacagccccttcgacccccaccaccgcccc
atggcccccggagagcccaggttccacctgcctccacacctagaccctgccctcttccac
agggccgtcctggacccagctgcgtacatgttcccgaggcagccgtccccaacaggctac
cacaacacctaccagctgtacaccatggagaacacgaggcagaccatcctcaatgattat
atcacctcccagcagatgcaggttatcccacggcccgacgtcgccaggggcctgtcgcca
cgggaacagcaaccgatagctctgtcttaccctcccggagcgcgagggattattgatcta
gcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtactcccactttg
gaccgcatcacctacatccccggagctcaaccccctttccctcctaggccattcaaccaa
gcctccatatctccaggccaccaagcccacctcgcagctactgcagcggtcaaccaggag
cgagagagggagcgtgagcgagaaagggagcgtgatcgggagcaccgagaaaaagagaga
gaaagggagcacagggagcgggaacaggagcaaagacaacgagagcgtgagcgagcagtg
gctgcagcggttgccaatgactacatgcgtggaggtccagggcagccagacagaccaggt
agccgtggatacctgcgtagcccctccccatctatgaggtcacaggaagcccagcagcag
cggcccagcatcttccagggagccaacagcaagggcgtcatcacccccctcatgccggca
gcggcagcagcccaggcaggagcccgttacagcactgcagccgatgccctggctgccctg
gtggacgccgccgcctccgcccctcaaatggacgtcaacaagggcaaggactcctccaag
cacgaccgagacgacgacatgtctttatcatcctcagtggccaggcggcagcacgagcag
cagcaggaggcagacaggcgctccatgcagtctccctatggcccaatgtctctgccaggg
gggaaactccacccaggatacactgaggggcccagtggtccccaggggagtaaggacaag
ggtcctcccagcaagtcacgcatcgaggaagagctgaggaccagaggaaagaccaccatc
acagccgccaacttcattgacgtcatcattacgagccagattgcctcagacaaggactcc
cgggagagaggctcccagagctccgactcctccagcagcttgtcgtccagtcggtatgag
atccccagtggaggagccatcgatgtgatcagtccagccaactctccagcccagtcccag
cagcaacagcagcaggacgacagggaccgggccgacagggagagggctgacagggaccga
gccgacagggaccgggccgcacaggcagcagtacaagcagctggcatgcgtccctttgac
atgatccgctaccgccagtcagcagagtcccagcagcccccctcctcccaggctgacgga
gggtactcccagtcccagcaggtccccaagacccaccgggtcatgaccctggctgaccac
atctcgcatatcatcacccaggactttgccaggaaccaggaccctcctcagtcctccact
accatctcctcctctgccaccaccacattccagagtgcccagctgcccgtgtctatcttg
ggccccgggggtcgtgccaagggccccagccgctacagcccagaaaaccaggcccaggtc
tcatcacaccaccagagacagacacccagcagagtgtctcccgataatgcccctgacaag
cccagagccagacctggtaaatcccctgatcggggtggcaggggggcgatggagagctat
gagcccatctcccctccccagagctaccaggataaacaacaagaggccagagagcagcag
caaccacagaggcgagaggctgaccagcctgagatgaggggtgactctcgctcccctggc
agtgtcagctacctgccctccttcttcaccaggctggagaacacctcccctatggtgaaa
tccaagaagcaggagatcattcgtaagttgaactcctctggtgtcagtgattctgatgtt
ggaaatgcacaaccaggcacagagatcttcaacttgcctgctgtgaccagctcaagtagc
gtgaaccccaggaaccactccttcagcgacccggccagtaacctgggcctggaggacatc
atccgaaaggccctgatggggaacctggaagaaaggccagaggagcaccaggaagggcct
cagcccagctctaacacccccagcaacgaggcccgccaggaggccaacccttcacctagc
atgggcaaacagaaactgcagagcaaagccaacagccgaaagtcaaagtcgcccaaccca
ggccaggcatacgcagcagcaggaggggagcggccctcgtcagtctcttccgtccactca
gagggagactaccaccagcagcccccagcctggtcctgggaggaccggccctcgtccaca
ggctccatgcagttcccctataaccccttgaccatgcgcatgctgagtagcacacccccc
tcctccatacaggcccagcagcccccacctggaggccctctggggccccagcagcaacag
cgtgtatgggagcgagagcccctactgtcggagcagtatgagaccctgtcagacagtgac
gactga
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integrated database retrieval system
