Salmo trutta (river trout): 115154334
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Entry
115154334 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1-like isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115154334
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115154334
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115154334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-RING_6
Prok-RING_4
Zn_ribbon_6
zf-RING_16
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
115154334
NCBI-ProteinID:
XP_029556319
Ensembl:
ENSSTUG00000019450
LinkDB
All DBs
Position
19:complement(30788627..30795456)
Genome browser
AA seq
428 aa
AA seq
DB search
MCFQSTYLVKSDSKRTLKSRESPTVMQPNSSELGAHQAGHGLSLTLLTRTPAGATGGSAV
PETSGEVRVPILSSGPWESCRGGASSRRSRVSSRTSSHSHSHSHGGGHQHSHSEPSEADP
ADADLESGEPSTSFLELHYLFRWVQKSLPFIIILCAKLVIQHALGLAVGVGLFTTFLYVN
KNIQTQVFLLDRRSKMECVWLLLFLASSTLLLYYTFLTETLYYCLIFLNPAVELLGFWEV
LWVVGVTNFTLKFLIMGFKCLILLLPSNLVTYRAQGRWYMLTEEVGQVYQAVAPTPLWFR
YLVTYQEVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRIFLSGEHTGAAATRSQ
CSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLCRTAITDKVHKWRDGA
TSPYLQIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttcagtctacttacctggtaaagagtgattccaaaagaacgttgaaatcgagg
gaatccccaactgtgatgcagcctaactccagtgagctgggtgcccatcaggcaggacat
ggtttgtctctgacgctactgaccaggacaccagcaggggctactgggggctctgctgtc
ccggagactagtggagaggtccgggtacctatcctctccagcgggccctgggagtcatgt
agaggaggggcgtcatcccgtaggtccagagtcagttccagaaccagttcccacagccac
tctcattcacatggtgggggacaccagcactcccacagtgagcccagtgaggcggacccg
gctgatgctgatctggagtcaggggagcccagcacctcattcttggagctgcactacctc
ttccgctgggttcagaagagtcttcctttcataatcatcctttgtgctaaactggtcatc
caacatgccctaggtctagctgttggagttggcttatttacaacttttctttatgtgaat
aagaacattcaaacccaagtctttcttctggatcgtcggtcaaagatggagtgcgtatgg
ctgctcctcttcctggcgtcctccacactcctgctttactacacttttctcactgagaca
ctttactattgcctcatcttcctaaacccagctgttgagctcctaggtttctgggaggtc
ctatgggtggtgggcgtcaccaacttcacactcaagttcctcatcatggggtttaagtgc
cttatcctactgctgccctctaacctggtgacctacagagcccagggacggtggtacatg
ctgactgaagaggtgggccaggtgtaccaggctgtggctcccacccccctatggttccgc
tacctggttacctaccaggaagtggatggaaatactggcctcaccctgggagttctgctg
gctttggtctacttcatactcaagcttttaggattgtatggacagtgggggtctttccag
aaaactgtgaggatatttctcagtggcgagcacacgggggcagcagccaccaggagccag
tgcagtgaggctggggacatctgtcctatctgtcaggcagagtacagagacccaagggcc
ctcctgtgtcagcacattttttgtgacgagtgcattgctctctggttcaaccgggagaag
atgtgtccactctgccgcacggccatcacagacaaggtccacaagtggagggacggggcc
acgtcaccttacctccaaatctactga
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