Salmo trutta (river trout): 115154379
Help
Entry
115154379 CDS
T08542
Name
(RefSeq) Down syndrome cell adhesion molecule-like isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115154379
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
DSCAM family
115154379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
V-set_CD47
Ig_6
C2-set_3
Interfer-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
115154379
NCBI-ProteinID:
XP_029556408
Ensembl:
ENSSTUG00000018249
UniProt:
A0A673Z9L6
LinkDB
All DBs
Position
19:33425371..33588037
Genome browser
AA seq
2033 aa
AA seq
DB search
MWILAIIFFQCILNVFSEDLRSSLYFVNASVQEVVFASTTGTSVPCPAVGVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHFNPSSFSNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTVSINVQTPRFLITSTG
ALYILDVQNEDGLYNYRCMTRHRYTGETRQSNSARLFLSDPTNSAPAILDGFERREVMTS
HRVELPCKASGHPAPKYRWLKDNRPLEPDSRFRQSVTGLLIERAQPSDTGSYVCEVWNSY
GNAEVVGRLQVKEPLKAVVSPRKVKGSVGSQVSLSCSVSGSEEYELSWYRNGEIIYPGNS
VRMTGNNRENLVMAGMAKSDGGAYQCFARNGKMSAQDFVQVILEDGTPKIISSFSEKVFG
TNEFVSLFCTVKGTPEPRVTWTLDDEPVIRDSRHRIGHYTNQEGHVVSHLNISQTTGPDG
GVYRCICNNSAGVVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWHK
DANLLPYNHRQRAFENNGTLKLYDVQKDVDEGEYTCSVLVSPSLSTSQSVHVSVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGQPIPASLSVTIDNIDFTSSLRISNL
SLLHNGNYTCIARNQAAIVEHQSQLIVRVPPKFVVQPKDQDGIYGKAVILNCSAEGYPVP
TIVWKYSKGAGVPQFQPIALNSGFRIQVLANGSLLIKHVLEEDSGYYLCKVSNDVGADVS
KSMYLNVKIPAMITSYPNTTLATQGSEKRMSCTAHGEKPIMVRWEKEERIINPESSHRYV
VTVKEVADEVISTLQIRPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREV
KDRTIALRWTMGFDGNSPITGFDIECKNKSGSWEMAQRTKDVSPQLNQATIIDLHPSSTY
SIRMFAKNHIGKSEASNELTITTDEAAPDGPPQDVQLEAFSSQSIRVSWRAPKKHLQNGA
IRGYQVGYREFSTGGNYQFNVISMETTGDNDHSESVTLDNLKKFTQYGVVVQASNSAGTG
PSSQEVISTTLEDVPSRPPENVQATAASPEIISLSWLTPPKDALNGILLGFRVIYWANLP
DGELGEIRNVTTSKPSLELDGLEKYTNYSIQVLTFTRAGDGVRSEQIFTRTKEDVPGPPA
GVKAAAASNSMVFVSWLPPLKLNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSR
NRQYSIWVVAVTAAGRGNASDIITVKPQAEAPAQILTFNGTVTTPWMRDIVLPCKAVGDP
APTVKWLKETNGSPAPAVIDSRRIIQGNGSLVIRTVKAEDSGNYTCVASNSFGPDKIILN
LQVQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEKWGNFAISPSE
RSYRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSKEQELFTSINATRVR
LNLIGWNNGGCPITSFTLEYRSVESPTWTTAQRTSLTKSYILYDLAEATWYELQMKVFNS
AGSAEKRVKFSTLSYDGSTIAPLVKAPTVSVDSTSSNEGLKMVTIISCVLVGIVLVFVLL
LVLRRRRREQRLKRLRDAKSLAEMLMSKNTRPADTINKQQQTLRMHIDIPRAQLLIEERD
TMETVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTAR
RTAKAGPAARNRYASQWTLNRPHPPVSAHTLSTDWRLPTPRVAGSVDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTND
YTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAAPKAHRPGGELVHLPPYLRMDFLLN
RGISCSGTGGRGGAGGEGAMGQACLEPQKSRSLKRPSRMAPPTPTEAPQASSRASSRDPV
AQWQPGSAATLPHREGSELAQAAKLSSSQESLLDSRGHLKQTNNPYAKSYTLV
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctatcatctttttccagtgcatcttgaatgttttcagtgaagatcta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgcaagcaccaca
gggacctcggtgccctgtcccgccgtgggcgtgccccccgcctcgctgcgctggtacctg
gccaccggagaggaaatctacgatgtccccgggatccgccacgtgcaccccaatggcacc
ctccagatcttccacttcaacccctccagcttcagcaacctcatccatgacaacacctac
tattgcacagcggagaacccctcagggaaaatcaggagccaagatgtccatattaaggct
gttctacgagagccctacacggtccgtgtggaggaccagaaagccatgagaggcaatgtg
gcggtgttcaagtgcattatcccagcctcggtggaggcctacatcactgttgtgtcctgg
gagaaagacacagtgtctatcaacgtccagacgcctaggttcctcatcacctccacagga
gccctgtacatcctggacgtgcagaatgaggatggattgtataactacaggtgtatgaca
cgccaccgctacacaggagagaccaggcagagcaacagtgcacgtctctttttgtcagac
cccactaactcggcgccggccatcctggatggctttgagcgtcgtgaggtgatgacatca
caccgggtggagctgccatgcaaggcatctggtcacccggcccccaaatatcgctggctg
aaggacaaccgaccgctggagccggacagccgcttcaggcagagtgtgacgggcctgctg
atcgagagggcccagcccagtgacacgggaagctacgtgtgtgaggtgtggaacagctat
ggcaatgcagaggtggtggggagactgcaggtcaaagagccgctgaaggcggtggtcagc
ccgaggaaggtgaaaggcagcgtgggtagccaggtgtctctgtcgtgcagcgtgagtggc
tcggaggagtacgagctgtcctggtaccggaatggagagatcatctaccctggaaacagt
gtccgcatgactggaaacaaccgggagaacctggtcatggctgggatggctaagagtgat
ggaggagcctaccagtgcttcgccaggaatggcaagatgtccgcccaggactttgtccag
gtcatcctggaagatggcacgcccaagatcatctcctccttcagtgagaaagtgtttgga
accaacgagtttgtgtcactgttctgcacggtgaaaggcactccggagcccagggtgacg
tggacgctggacgatgagccggtgatcagggactcccgccaccgcatcggccactacacc
aaccaggagggccatgtggtcagccacctgaacatcagccagaccacggggccggacggg
ggtgtctaccggtgcatctgcaacaattcggccggggtggtctcctaccaggcgcgaata
aacgtaagagggcctgccagcatacgaccaatgaaaaacctcactgccattgctgggcgg
gacatgtatatccactgccgcgtcattggctacccgtactactccatcaagtggcacaag
gatgccaacctgctcccctataaccaccggcagcgggcgtttgagaacaatggcacgcta
aagctgtatgatgtacagaaggatgtggatgagggagagtacacgtgtagcgtgctggtc
tcaccttctctctccaccagccaaagtgtgcacgtcagtgtgaaagttcctcccaccatc
catcccttcgagttccctcgtttctccatcggccagcgtgtgttcattccatgtgtggtg
atgtcaggtgaccagcctgtcttcatcacatggcagaaggacggtcagccaatcccggcc
agcctgagtgtaaccatcgacaacatagacttcaccagctccctgcgtatctccaacctg
tctctcctgcacaatggcaactacacctgcattgcacgcaaccaggccgccatcgtggaa
caccagagtcagctcattgtcagggtccctcccaaatttgtggtgcagcccaaggaccag
gatggcatctatgggaaagctgtgatcctcaactgctctgcagagggataccctgtccct
accatagtgtggaagtattccaaaggtgcgggggttccccagttccagcctatagccctg
aactcaggcttccgtatccaggtgttggccaacggctctctgctaatcaagcacgtgctg
gaggaggacagcggctactacttgtgtaaagtcagcaatgacgtgggagctgacgtcagc
aagtccatgtacctcaacgtcaaaatcccggctatgatcacgtcgtaccccaacaccacg
ctggccacgcagggcagtgagaagaggatgagctgcacggcccacggggagaaacccatc
atggtgcgctgggagaaggaggagcgcatcatcaacccggagagcagccaccgctacgtg
gtcaccgtcaaagaggtggccgacgaggtcatctccaccctgcagatccggccgacagtg
agggaagactctggcttcttctcctgccatgccatcaactcctatggtgaagacagaggg
atcattcagctaacagtgcaagagcccccggaccctcctgaggtggagatcagagaggtg
aaggacaggaccatcgccctccgctggaccatgggcttcgatggaaacagcccaatcaca
ggcttcgacattgagtgcaagaacaaatcaggctcctgggaaatggcccaaaggaccaaa
gacgtgtctccccagctcaaccaggccaccatcatagacctgcacccctcctccacatac
agcatccgcatgttcgccaagaaccacatcggcaagagtgaggccagcaacgaactcacg
atcaccacagacgaagcagctcctgatggtcccccacaagatgtgcagcttgaagctttc
tcctctcagagcatcagagtctcctggagggcccctaagaagcacctccagaacggggca
atccgtggctaccaggtgggctacagggagttcagcaccgggggaaactaccagttcaac
gtcatcagcatggagacgacgggggacaacgaccacagtgagagcgtcaccctggacaac
ctgaagaagttcacccagtatggagtggtggtgcaggccagcaacagcgctgggacagga
ccctcctcccaggaggtcatctctaccacgttggaggacgttcccagccggcctccagag
aacgtccaggccacagcagcgtctccagagatcatctctctatcctggctgacccctcct
aaagacgctctcaacggcatcctgctcggcttcagagtcatctactgggccaacctgccc
gacggagagctgggggagatccgaaacgtgaccacctctaagccgtctctagagctggat
ggtctggagaagtacaccaactacagcatccaggtgctgaccttcacccgggccggggac
ggggtgcgcagcgagcagatcttcacccgcaccaaggaggacgttcctggtccgccggct
ggcgtgaaggcagcggcggcgtctaactcgatggtgtttgtgtcgtggctccctcctctc
aaactcaacggcatcatcaggaaatacacagtcttctgctctaacccacaccccacggtg
agcagtgagtttgaagcagctccagacgtattcttctaccgtatccccaacctgagcagg
aaccgccagtacagcatctgggtggtggccgtcaccgcagccggccgtggcaacgccagc
gacatcatcaccgtcaagccccaggccgaggctcctgctcagatcctgacattcaacggc
acagtgaccaccccctggatgagggacatcgtgttgccctgtaaggcggtgggcgaccca
gcccccacggtcaagtggctcaaggagaccaatggaagccccgcccctgctgtgattgac
agtagacgcatcattcagggtaacggcagcctggtcatccgcacagtgaaagctgaggat
tctgggaactacacctgtgtggctagcaacagttttgggccagataaaatcatcctcaac
ctgcaggttcaagttcccccggaccagcctcgtctcaccgttaccaagacgaccaccact
tccatcactctgtcctggataccaggagacaacggaggcagctccatacgaggctacatc
ctgcaatactcagaggacaacagtgagaagtggggcaactttgccatcagccctagtgag
cgttcctatcgactggagaacctgaagtgtggcacctggtacaagttcaccctgactgcc
cagaatgctgtggggccagggcgcatcagtgagatcatcgaggctaagactcatgggaaa
gaaccccagtactctaaagaacaggagctcttcaccagtatcaatgccacacgtgtcagg
ctcaacctgattggctggaacaacggcggctgtccaatcacgtccttcacgttagagtac
cgttcggtggagtctcccacgtggaccacggcccagcgcacctctctgaccaagagctac
atcctgtatgacctggccgaggccacctggtacgaactgcagatgaaggtgtttaacagc
gccggctcagcagagaagagggtcaagttttccactctgagctacgatggcagtaccatt
gctccactggtgaaggctccaacggtgagtgtggacagtacgtccagtaacgagggtctg
aagatggtgaccatcatctcctgtgtgctggtgggaatcgtgctggtcttcgtcctgctg
ctagtcctcaggaggaggaggagggaacagagactgaagaggctcagagatgcgaaaagt
ttggcagagatgctgatgagtaaaaacacacgacctgcagacaccatcaacaagcagcag
cagacccttagaatgcacatcgacatcccccgagcccagctgctcatagaggagcgagac
accatggagacagttgacgacaggtccacagtgctgctgactgacaatgactttggggag
actcagaaacagaagtcatctacggttacccacaccgtccactaccagtccctgtcccag
gccaccggacctctagtggatgtatctgatgctaggccaggaaccaatcccacagcccgc
cgcacagccaaagcaggccctgccgcacgtaaccgctacgctagccagtggaccctgaac
cgaccacacccgcctgtctcggcccacaccctgagcactgactggagactgcccacgcca
cgggtggccggctctgtggacaaggagagtgacagctacagcgtcagcccatctcaggac
acagaccgggcacggagcagcatggtgtccacagagagcgcctcgtccacctacgaggag
ctggcgcgggcctacgagcacgccaagatggaggagcagctgcggcacgccaagtttacc
atcacagagtgcttcatctcggatacgtcgtcggagcagatgacagcaggcaccaatgac
tacacagacagcctgacgtccagcacaccctccgagtcaggcatctgcaggttcactgcc
tccccgcccaagcctcaggacgtcagccgagtcatgaacatggccgcacccaaagctcac
agaccggggggcgagctagtgcacctgcctccttacctgcgcatggacttcctgctgaac
cgcggcatatcgtgctctggcactggagggaggggtggcgccgggggagagggggccatg
ggccaggcctgcttggagccccagaagagtcgctccctgaaacggccatcacgcatggcg
cccccaactcccacggaggccccccaggccagcagcagggccagcagcagggacccagtg
gcccagtggcaacccggctcagcagccaccctgccccacagagagggctcagagctggcc
caggctgccaagcttagctcctcccaagagtccctactggactcacgaggacacctcaaa
cagaccaacaacccctacgcaaagtcctacacgctggtataa
DBGET
integrated database retrieval system
