KEGG   Salmo trutta (river trout): 115154436
Entry
115154436         CDS       T08542                                 
Name
(RefSeq) short transient receptor potential channel 2-like
  KO
K10803  DNA-repair protein XRCC1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115154436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stru03400]
    115154436
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     115154436
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2 IBR_1
Other DBs
NCBI-GeneID: 115154436
NCBI-ProteinID: XP_029556503
Ensembl: ENSSTUG00000028341
LinkDB
Position
19:35196457..35202531
AA seq 446 aa
MAPVKIKHVVSFTSQDPKNGVENLCVVGGDSRSWLCNPQDRSGVLRAELQLERASYFGYI
DVGNCGSAFIQIDVGRSSWPLDQPYITLLPTATLMSPAESRQGTGLTGVRMFKKGDFLSE
GAEDSWDRLRVTCTQPFNKRSQFGLSFLRIRSPLEESEEGSTQTGKESQGQTTPDKSASG
VREWLSSPAVQRTFFGGTKGEGVVLSRTARMVLTASQAARRSLPLPSTSLSPSHTSSSGT
QNTATSTPPTAKPDATTHIPNQGKPGAHTATPNKGKPVGNMGNIHPHTASIACLRTVRSS
KENTSQRHLKRKPNSKSRQNQLNGTTSSKQGKPAVSKRPIATLQHTATAPHPQDTGDLET
TCPICGVFFTAEYLPLHAASCQRLETRKLPGGIVTPVPRPFPVSPASPEESMVPCPLCSF
RFPLSHIQMHASTCGDPVDPHVIWVD
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggccccagtgaaaattaaacacgtcgtttcattcacgtcacaggaccccaagaacggt
gtggagaacctgtgtgttgtgggtggagacagcaggtcgtggctgtgcaacccccaggac
cgaagtggagtcctcagagcagaactgcagctggagcgagcctcatactttggatacatc
gatgtggggaactgtggatctgcgttcattcagattgatgtcggccggtcctcttggccc
ctggaccagccctatatcaccctgttgccaacagcaacactgatgagtccagcagaatcc
cgacagggcactgggctgacaggagtgagaatgttcaagaaaggtgatttcctgtcagaa
ggtgcagaggacagctgggaccggttgagagtaacctgcactcagccttttaacaagcgc
tctcagtttggcctgtccttcctgcgcatccgcagccccctggaggagagcgaggagggc
tccacacagactggcaaagagagccagggtcagacaaccccagacaaatcggcatcaggc
gtgagagaatggctgtccagccctgctgtgcagagaaccttctttgggggaacgaaaggg
gagggtgtggttctgagccggacagctcgtatggtcctcacagcgtcccaggctgccagg
cgttcccttccccttccttccacttccttgtctcccagtcacacatcatcctctggcact
cagaatacagcaacctctacccctcccacagccaagccagatgcaactacccatatcccc
aaccagggaaagccaggggctcatacagctacacccaacaaaggcaagcctgttggaaat
atgggaaatatacaccctcacacagcttcaatagcttgtttaagaacagttcgcagctcc
aaggaaaatacttctcaaagacacctgaagagaaaaccaaactccaaaagcaggcagaac
cagctgaatggcaccacctctagtaagcagggaaaacctgcagtcagtaagaggcctata
gctacgctacaacacactgccacagcccctcatcctcaggacactggtgaccttgagacc
acatgcccaatatgcggagtgttctttactgcagagtacctgccgctccacgccgcctcc
tgccagcggttggagaccaggaagctccctggggggattgtgacccctgttccccgcccc
ttccctgtctctcctgccagcccagaggagtccatggtgccctgccctctctgctccttc
aggttccctctgtcccacatccagatgcatgccagcacctgtggagaccccgtggacccc
catgttatctgggtggactag

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