Salmo trutta (river trout): 115154456
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Entry
115154456 CDS
T08542
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115154456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115154456
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115154456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
115154456
NCBI-ProteinID:
XP_029556555
Ensembl:
ENSSTUG00000009434
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All DBs
Position
19:complement(35762227..35786526)
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AA seq
1272 aa
AA seq
DB search
MIAAQELHTEFQFPQEADTQLSSDTDLEDPDVKNAKLGKGKAGKKGKKAPGEKGKGGAAK
GAGLGRVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSVNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYVILWHLSKVSEGSSTKADMVTLRKQMRAFCLMCQSYLTSVNTTVK
EQAFTILCDTLMIFSHQIVSSSREQLEALIYTPDSSLQAELLNFILDHVFIDQDDDNNST
DGQHDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRGSSIRSKKAKPASTGKRK
LPEAEESSSCSTDAVWMNREQNVQTPVMMPSPHLSSTVLRDPKKMRPEESYMGVYSMTSE
QQQQPPLPPQQHHQTPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQHAIRRS
SGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSS
IMDDSVLNVSMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaggagttgcacacagagtttcagtttcctcaggaggctgacacacag
ttgtcctctgacacagaccttgaggaccccgatgtcaaaaatgcaaagcttgggaaagga
aaggcgggtaagaaggggaagaaagcccccggagagaagggaaagggtggggcagcaaag
ggtgctggccttggccgggtgaatggccaccaccaggagaatgggatggagaacatgacc
ctgttcgaggtggtgaaaatggggaagagtgccacacagtctgtcgttgatgactggatt
gagtcttacaagaacgatcgagacattgcactccttgacttgatcaacttcttcatccag
tgctccggctgtaaaggtgctgtcagtgcagagatgttcaggcacatgcaaaactctgag
ataatcaggaagatgactgaggagtttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgagtacatgatggacacggttatctcactg
ctcacgggcctgtctgactcgcaggtccgagccttcagacacaccagcacactggcagcc
atgaagttgatgaccgccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtacgaggcagagaggaacaaggtcatggccaagagggccaacgatcgg
ctggagctccttttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgattttcaaaggagtgtttgttcacagatatcgtgatgccatagctgaa
atccgggcaatttgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgtcggatggaccatgcatgacaagcaaggtgaagtg
cgtctcaagtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcgg
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatgactctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgctcatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagccatcgaggtccagag
gaggaggggatgcccaggaggggcaggcagagcgtcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagtctg
tgggagtgtgcaggggagctgctaaaagactgggagagcatgatcagcctgctgctggat
gagcccatgccaggggaggaggccctgactgaccaccaggagactgctctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcaggggcacaggg
aagagggtcttgacagcgaaggagaagaaaacccagctggatgaccggacgagaatcact
gagattttcgctgtggcgttgcctctgttgttggccaagtactctgttgatgctgagaag
gtgaccaacttactgcagctgccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacttaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacatcgccaggtcccagctactggacgagctggtggacaag
ttcaacagactcctggaggacttcctacaggagggcgaggaaccagatgaggatgatgcc
taccaggttctgtccacactgaagaggatcactgcattccacaatgcgcatgacctctct
aaatgggacctgttcaccagcaactataagctactaaacacaggacttcagaatggagat
atgcctgagcagattgtcattcatgcaatgcagtgcacacactatgtcatcctatggcac
ctatccaaggtttcagagggcagctccacaaaggcggacatggtgaccctgaggaagcag
atgagggctttctgtctgatgtgccagagctacctcaccagtgtcaacaccaccgtcaaa
gagcaggccttcaccatcctgtgtgacaccctgatgatcttcagccaccagatcgtgtcg
tcgagccgggagcagctggaggctctgatctacacgccagactcctccctgcaggccgag
ctgctcaacttcatcctggaccacgtcttcatcgaccaggacgacgacaacaacagcaca
gatgggcagcatgatgatgaagccagtaaaatcgaggctttacacaagaggcgtaacctg
ctggcagcgtactgcaaactgatcatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaacgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccgcagggagagggaaaccctcctctcaacctagccttcctggacattctcagc
gagttctcctctaaactgcttcgtcaggacaagaagactgttcacctctacctggagcgg
tttatgaccttccagatggccttgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtccgtcatcagcggctacagc
agccgaggttccagcatcaggagcaagaaggccaagccagccagcaccgggaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacgctgtgtggatgaaccgggag
cagaatgtgcagacgccagtgatgatgccctcgccgcatctcagctccactgtgctgagg
gaccccaagaaaatgaggccggaggagagttacatgggtgtctacagcatgacatccgag
cagcagcagcagccaccgctgcccccccagcagcaccatcagacccccatggactacaat
acccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcaggag
cgagccagcatgcagtatgccaagatgaggagccacatgcagcatgcaatccgccgcagt
tcaggactcatggaggacgatgaggagccaatagtagaggatgtaatgatgtcatcagag
gaccgtttggaagatctcaacgagggcatggatttcgacactatggatattgatctgcca
ccatctaaaaatcgtagagagagatcggagctgaagcctgactactttgacccttcttcc
atcatggatgattcggttctcaatgtttcaatgttctaa
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