Salmo trutta (river trout): 115154510
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Entry
115154510 CDS
T08542
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115154510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115154510
03036 Chromosome and associated proteins [BR:
stru03036
]
115154510
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115154510
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115154510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
C5HCH
Motif
Other DBs
NCBI-GeneID:
115154510
NCBI-ProteinID:
XP_029556651
LinkDB
All DBs
Position
19:complement(36898375..36946693)
Genome browser
AA seq
1972 aa
AA seq
DB search
MSAEMLSIPLGTSKLNVLVTKLHGFLAHAPEEEDDTLVTESPEGITNKDCVEPHSTDRNS
LETSTDTLKQSRCGSRRKPSVVIKHSGVDESGASNESDDDCLIVNSNGYPDVTRLPKGTA
LVRPEPVDNVRDDFRGTEFHCGKSGNLRRVFSRRRGGGEHLEIVSCTACGQQVNHFQRDS
FNQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFCKKCIL
RNLGRKELSAILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGSLWQDHRKRGRGDDKSG
HCDSHPRHSQNIPTGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNTTFVKF
IQGGMDFKRQYLKTFQSVLKGLKQSHTALEEALWEEFKEIGLPNDGGNPTFDTDAPQQAQ
EGCVEMDIVDKNCLHYLKKIAAEHLEENDSDSKGFTDDERPSSSSEMKGVLGTEIMPRRG
RGRPRKNSKPGEDPSNMTKQLVVQLTPVPVEKQPPSGPPELEVELEEKKELQEEIKEKVD
ERKGDCDSIEPATEGEYESAEEGNESLELEDEPENRRSPRVKTTPLRRPGEGNTKPTPSG
ADSEGDSDPDTSPNVEVPQGADEGGLGRGIEDSDSDEVPAVLQRAAMARSSDEAGSDDGD
HRSVTKKCLFALKKNTPLSPERVVRKRKVQDRSSDSDSSSYNPDLQKEIKIMSRPRGRPR
KVKREDEPTPSKDSPQHRPPGRPRKVKKENESASSKEGNTQITKPKSTPRSQQRTKQSPS
SSSQEEGDQDSESSDDSGDQKIKPITEEMALLGSAAFHQSSGDEEQTRSGPSWEAEDDDD
PENRIAKKMLLAQIKANYSSGEDFSSDEESSQDDESDREEKAQEDGKDESSDENGETSSL
TSDSESSKTRHRHCLLRHKLSLDDGNPSDQKRAEENGNALKVKKSRRAEGETLESQSSDD
SQSEQEESGMSEELSQSENEGNEQKPKSSSTSRVERESVRSYLQKKQQPSYIVLSDSSID
KSEDDEKDNEEGDNKGTPKGRKKIRRIIIDEHLRSETQRALKDEEDRCRRLAEREQREDF
REVIVIDDEVSQVACPITTKLVLDQDEGTREPLIQVHRNLVTRLKPHQVDGVQFIWDCCC
ESVKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSRCLNFRTALVVCPLNTILNWVN
EFDKWQVNMGADKVKVTELATLKRPQERYIALQKWQKDGGVMIMGYEMYRNLTLGLKVTH
RQFKKTFNSTLVDPGPDFVICDEGHILKNEASNISKAMSAIKTKRRVVLTGTPLQNNLNE
YHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPRDVRIMKNRAHVLHAMLAGCVQR
RDYSALTKFLPPKHEYVMAVRVTPLQYRLYRYYLDNFTGAGSVVEGARGKTGTSLFKDFQ
ILSRIWTHPWCLQLNYISKENKGHFDGKHQGKAESKEKENKGKLRNADEKSNDVEVIVVW
NSSSKGVNVEGDQRAGPLVPVVDAVRASTSFRPDSPAADWYKDMLSDSDATILGHSGKMV
LLFEILRMAEELDDKLLVFSQSLISLDMIEDFLDLANKAKDNGQSSLYKGDGSWIRNIDY
YRIDGSTSATSRKKWAEEFNDATNERGRLFLISTRAGSLGINLVAANRVIIFDASWNPSY
DIQSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIQRHFTLFE
LTELYMFEPDLLDDPNSEKKSKRITPLLPKDMVLAELLQICKEQIVRYHEHESLLDHKEE
EELSEADRKAAWAEYEAEGAFFLNKAAHNSTSTNVPSSSTSRMANSLSSLYKKTDEQLKN
MINASRDKVSEAIKSLHSLKNLSMDDYVLRLWHDNPSLDEKQVKILAQTWKTSNDKERER
RRALYHDLLSKQQSLTICIQTILTSRKTEVTQTATVTNQSPALTDSVKIPMQ
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagagatgctcagcattcctcttggcacgagcaagctcaatgtgttggtgacc
aaactgcatgggttcttggctcatgctccagaggaggaagatgacacactggtgactgaa
agtcctgagggtataacaaacaaggactgtgtggagccacactcaacagaccgaaactcc
cttgagacctcaacagacaccttgaagcagtccagatgtggttccaggagaaaaccttcc
gttgtgattaaacacagtggagtggatgaatctggtgcttcaaatgaaagtgatgatgac
tgcttgatcgtcaactcaaacggttatcctgatgtaacaagattgcctaaaggtactgca
ctggtgaggcctgagccggtggataatgtcagagatgacttccgaggtacagaattccat
tgtggaaaatctggtaatctgaggagagttttttccaggagacgtggaggaggtgaacac
ttggagattgtcagctgtacagcctgtggccagcaagttaaccacttccagagggactcc
ttcaatcagcatccggtactcaaagtacttatttgcaagtcttgttttaagtattactca
agtgatgacatcagcaaggattgtgatggcatggacgaacagtgcagatggtgtgcagag
gggggaaacctgatctgctgtgacttttgtcccaacgccttctgtaagaaatgcattttg
cgcaatctggggcgaaaggagctgtctgccatcctggatgaggagagtaagtggtactgc
tacgtatgcagcccagagcctcttctggacctggttgtcgcctgtgacaacgtccttgac
aacctggggagtttgtggcaagaccaccgcaagaggggcagaggtgatgacaaatctgga
cattgtgactcccatcccaggcattctcaaaacattcccacgggtcattggaaccatagt
ggcatggatggtcatgtggtgttcaactacaacacccttcaaattccagaggagatggcc
aaaaaggcaaaaaaccttgtggactctacaaacactgtaaacacaactttcgtgaagttc
attcaaggtggaatggattttaagcgacaatacttgaagactttccagtcagtactgaag
ggtctaaagcagtcccacacagctctggaggaagccctttgggaggagttcaaggagatt
ggtctgccaaatgatggcggaaaccccacttttgatactgatgcacctcaacaagcacaa
gagggttgtgtggaaatggacattgttgataaaaattgcctgcattacttaaagaaaatt
gcagctgaacatttggaagagaacgattcagactctaagggctttacggatgatgaacgg
ccttcgtcctcaagtgaaatgaaaggtgtccttggcacagaaataatgccccgtcgaggt
agaggcaggccacggaaaaactccaaacccggagaagatccttccaacatgacaaaacaa
ctggtggtgcaacttacacctgtccctgttgaaaaacagccaccctctggccccccagag
ttggaggtggagttggaggagaaaaaggagttgcaggaagaaataaaagaaaaagtggat
gaacggaagggagactgtgattctattgaacctgcaacagaaggggagtatgaatctgct
gaggagggaaacgaatctctggaactggaagatgaaccagagaatagacgctcacctcgg
gtaaagaccacacccttacggaggccaggtgagggcaataccaagcctaccccctcaggc
gctgacagtgagggtgactccgaccctgacaccagccccaatgttgaagtccctcaagga
gctgatgagggagggcttgggagaggaattgaagactcggactccgatgaggtccctgct
gtccttcagcgggcagccatggctcgcagttcagacgaagccgggagtgacgatggagac
catcggagcgtgaccaagaaatgcctattcgccctgaagaagaacacgcccctctctcca
gaaagagtggtccgcaaacgcaaggtgcaagaccgctcctctgactctgactcctccagt
tacaatccagacctgcagaaggagatcaagattatgagcaggcccagggggaggcctcgg
aaggttaagagagaggatgaacctacccccagcaaggatagtccacaacataggcccccg
ggcagacctcggaaggtcaagaaagagaatgaatccgcatccagcaaggagggtaatacc
cagataaccaagcctaaaagcacacctcggtcccagcagagaacaaagcagtcgccatcc
tcttccagtcaagaagagggagaccaggattctgagtctagcgacgacagtggtgaccag
aagattaagcccatcactgaggagatggccttactggggtcagcagctttccaccagtcg
tctggcgatgaagagcagacccggtctgggccttcttgggaagcagaagatgatgacgat
ccagaaaatagaatcgctaagaaaatgctcttggcccaaatcaaagccaactactcatcg
ggggaggatttctcttcagacgaggagtcatcacaggatgatgaatctgacagggaagag
aaggcgcaggaagatgggaaagatgaaagctcagatgagaatggggagacctccagtttg
acctctgactctgagtccagtaaaactcgtcacagacactgtctgctacgccacaagctc
agccttgacgatggaaatccaagtgatcagaaaagagctgaagaaaatgggaacgcgctg
aaagtcaagaagtctagaagagccgaaggtgagacattggagagccagagtagtgatgat
agccaatcagaacaggaagagtctggtatgagtgaagagctgagccaatctgagaacgag
ggcaatgaacagaagcccaaaagctcatctacctctagagtcgagagggaatcagtccgt
agttatctacagaagaagcagcaaccctcatatattgtgctgtctgactccagcatcgat
aagagtgaagatgacgagaaggacaacgaggaaggcgacaacaaaggtacacctaagggc
cgcaagaagatccgcagaatcatcatagatgagcaccttcgctcagagacccagagagcc
ctgaaggacgaggaggatagatgcagacgcctggcagaaagagagcagagggaggacttc
agagaggtgattgttattgacgatgaggtgtctcaagtggcctgtccaatcaccactaag
ctggtcttggatcaggatgaggggaccagggagccactcattcaggtgcacaggaacctg
gtgaccaggctcaagcctcaccaggtggatggtgtgcagtttatctgggactgttgttgt
gagtctgtgaagaaggccaattcaacccctggatcaggttgcttactggcccactgcatg
ggcctagggaagacactgcaggtggtgacattcctccacacaatgctgcagtcaaggtgc
ctgaacttcaggactgccttggtggtgtgtccactcaacactatccttaactgggtcaac
gagtttgacaagtggcaagttaacatgggagctgacaaagtcaaggtgacagagttggca
acactgaagcgacctcaggagcgttatattgccctgcagaaatggcagaaggatggtggt
gttatgatcatgggctatgagatgtaccgcaacctcacactaggcctcaaagtcacccac
agacaattcaaaaagacctttaacagcacactggtcgatccaggtccagactttgtgatc
tgcgatgaggggcacatccttaagaacgaggcgtccaacatctccaaagctatgagtgcc
attaagaccaaacggagagtggtactgacaggcacaccactgcagaacaacctcaatgag
taccactgcatggtgaacttcatcaaggagaaccttctgggttcaatcaaggagttccga
aatcggtttatcaaccccattcagaatggccagtgtgcagactccacccccagagatgtc
cgcatcatgaagaatcgtgcccatgtccttcatgcaatgttggcgggatgtgtacagagg
agagactactcagccttgaccaagttcctgccccctaaacatgagtatgttatggcggtg
agggtgacccccctacagtacagactgtatcgctactacctggacaacttcactggagca
ggatccgtagttgagggagccaggggcaaaactggaaccagcctctttaaggacttccag
attctcagccgaatctggacgcatccctggtgtctgcagctcaactatatcagtaaagaa
aataagggccattttgatggaaagcaccaggggaaagctgagagtaaagagaaggagaac
aagggaaaattgcgtaatgctgatgaaaaaagcaatgatgtggaagtgatcgtggtgtgg
aacagctcatcaaagggtgttaatgtggaaggagaccagcgagcaggtccactggttcca
gtggtagatgcggtgagagcgtccaccagtttcaggcctgacagtccggctgcagactgg
tacaaggatatgctgagtgattctgacgccaccatcctgggacactcagggaagatggtg
ctgctgtttgagattctccgaatggcagaggaactggacgacaaactgttggtgttcagt
caatccttgatctcattagacatgattgaagatttcttagacctcgctaacaaagccaaa
gacaacggacaatcatccctatacaaaggtgatggcagctggatcagaaacattgactat
taccgtattgatgggtccaccagtgccacatccaggaagaaatgggctgaagagttcaat
gatgccaccaatgagcgaggtcgtctatttctcatctcgacaagagctgggtcccttggg
atcaacctggtagcagctaacagggtcataatttttgacgcttcgtggaacccctcctat
gacatccagagcatcttcagggtgtaccgttttggccagctgaaggcagtgtttgtctac
cgcttcttggcacagggcaccatggaggagaagatctacgaccggcaggtggccaagcaa
tctctatcgttccgggtggtggaccagcagcagatacagagacacttcactctgtttgaa
ctgacagagctttacatgtttgagccagacctgctggatgaccccaactctgagaagaag
agcaagaggatcacacccctgctgcccaaggacatggtgctggcagagctgctgcagatc
tgtaaggagcagattgtccgctaccatgaacacgagtccctgctggaccacaaagaggag
gaggagctcagtgaggctgaccgcaaagctgcctgggctgagtacgaggcagagggtgca
ttcttcttgaataaggcagcacacaacagcaccagcaccaacgttcccagctcctccacc
tctcgtatggccaacagtctgtcatccctgtacaagaagactgatgagcagctgaagaac
atgattaatgccagccgtgacaaggtcagcgaggccatcaagtccctgcattccttaaag
aacctctccatggatgactatgtgttgcgcttgtggcacgataacccaagtctagatgag
aagcaggtgaaaatcctggcccagacctggaaaaccagcaatgacaaggagcgggagcga
agacgcgccttatatcatgaccttctctcaaaacaacaatcacttacaatctgcatccag
accattttgaccagtagaaaaactgaagtgacacagactgccacggtcaccaatcagtca
ccagccttgacagactccgttaagatacccatgcagtga
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integrated database retrieval system
