Salmo trutta (river trout): 115154516
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Entry
115154516 CDS
T08542
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115154516 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115154516 (nup62l)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115154516 (nup62l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
TP0873_N
Motif
Other DBs
NCBI-GeneID:
115154516
NCBI-ProteinID:
XP_029556659
LinkDB
All DBs
Position
19:37001967..37026460
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AA seq
555 aa
AA seq
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MESTYKYRTMSGGFNFGQTSNTGFSFGAPKTTAAPATGFGNASAAPTAPGGGFSFGPPNP
AQPPNSTNSTGGFSFGNPTQNSTPAGGGFSIGTPTAKLNLGTPAASQPAPTGLTMGMATP
TSGAGFGLGGGFATQTTAVPTGGGFSFGTTGGLGAPVAQTPAQPAAAGGLSLGTPAATAQ
MMGGGFSFGAAKVQAAPTVTAGGGFSFGNSAPATLSMGNQSTGLNSVAPASTAAPTTTQG
GGFAFGVKPSATPAPAVTAPATQASLGSSLFAVPASTAAVTGFLGAAPTSAAPAATSAAG
STLGFMLKPLGAVTATTTAPAGTGFSLGMKPAGATGIGATAPITGVATTITTVTASAPPV
MSYAQLEGLINKWSLELEDQERHFLQQATQVNAWDRTLVENGEKITSLHREMEKVKLDQR
RLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRM
SQDLKEIIEHLNTSCGPADTSDPLQQICKILNAHMDSLQWIDQNSVLLQRRVEDVSKLCD
NRRKEQEKTFRITFG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaacatacaagtataggacaatgagtggaggattcaactttggacaaacgtcc
aatactggattcagctttggagctccaaaaaccacagctgcgccagccacaggctttggg
aatgccagtgctgcacctacagctccaggtggtggcttctcttttggaccccccaatcct
gcccagcccccgaacagtacaaactcaactggaggattcagctttgggaaccctacacag
aacagtactccagcaggaggaggcttctctattgggactcctactgctaaactcaatctg
ggcacaccagctgcctctcaaccagcaccgacagggctaactatggggatggcaaccccc
acttctggggcaggctttggacttggtgggggtttcgccacacaaaccactgctgttccc
acaggaggggggttcagctttgggaccacaggggggcttggagcccctgttgcccaaact
ccggctcaaccagcagcagctggtgggctctctttaggaactcctgctgcaaccgctcaa
atgatgggaggtgggtttagttttggtgccgccaaggtccaggcagcccctaccgtaacc
gcaggagggggcttctcatttgggaacagcgcccctgccaccctttccatggggaaccag
tccacaggtctgaactctgtggccccggcctcaacagctgcaccaaccacaacccagggt
ggaggatttgcttttggtgtcaaaccttcagctactccagcccctgctgtaactgccccg
gctacccaggcctcattaggttcttctctctttgcagtaccagcatcaacggcagcagtc
acaggttttttgggtgctgcccccacctcagccgccccggctgccacatcggcagcagga
agtaccctgggcttcatgctcaaacccctgggtgcagtcactgccaccaccacagcacca
gctggcacaggtttttcactgggtatgaaacctgcgggtgccactggcatcggcgcaacg
gccccaatcactggagtagccacaaccatcactactgttacagcaagtgctcctccagtg
atgtcctacgcccaactagagggtctcatcaacaagtggagtcttgagttggaggaccag
gagaggcacttcttacagcaggctacccaggtcaacgcctgggaccgcacgctggtggag
aacggagagaagatcacatcactgcacagggagatggagaaggtgaaactggaccaaaga
aggctggaccaggagctagacttcatcctgtcacaacagaaggaactggaggacctgctg
tccccgctggaggagtctgtcaaagaacagagtggaaccatctacatgcagaatgcagac
gaggaacgcgagagaacgtacaagcttgcagagaacgtggacgcccagctgaagaggatg
tcccaagatctaaaggaaataattgaacacctgaacacatcctgtgggccagctgatacc
agtgacccgcttcagcagatctgtaaaattctcaatgcccacatggactctcttcaatgg
attgaccagaactcggtgcttctacagagaagggtggaggatgtgtccaaactctgcgac
aaccgacgcaaagagcaggagaagacttttcgcataacatttggttaa
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