Salmo trutta (river trout): 115154643
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Entry
115154643 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115154643
04082 Neuroactive ligand signaling
115154643
04519 Cadherin signaling
115154643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115154643
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115154643
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115154643
NCBI-ProteinID:
XP_029556949
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All DBs
Position
19:43168297..43328868
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AA seq
475 aa
AA seq
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MAATLRKLAVFVSGMWICLLLLNPFPQTGAVVGHREPLPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGAESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDTHACPLKFGSYAYTNNEVVYIWTKGDEESVVVAKDGSRLNQYDLLGHDIGKESMSS
STGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQE
MRRRESASLSKKANNTFNIVGTTYTINVVKDPGLTTVSRSATTATHHHHHHSHKVPKMDD
NYVEAIKSYNRVSRVDKISRIIFPVLFFIFNLVYWATYINSKPRAIPSPRSTTHN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactctccggaaacttgcagttttcgtgtcaggcatgtggatctgcctcctg
ctcctcaacccctttccacagaccggggcagtggttgggcacagagagccgttgcctgac
gacagtagagacaacatcaccattttcacccggatcctggacagactgctggatggctac
gacaaccgcctgcgccctgggctgggagcagagagtgtgacggaggtgaggacaaatatc
tacgtgaccagcttcggaccagtgtcagacacagacatggagtacaccatcgatgtgttc
ttccgtcagagctggagggatgagaggctgaagttcgacgggcccatgcaggtcctgcct
cttaacaacctcctggccagtaagatctggactccagacaccttcttccacaacgggaag
aaatctgtggcccacaacatgaccacgcccaacaaacttctacgactggtggacaacggt
accctgctttacactatgaggctgaccatccatgctgagtgtcccatgcacttggaggat
ttccccatggatacacacgcctgtcctctgaagtttggaagctatgcgtataccaacaat
gaggttgtctatatctggaccaaaggggatgaggaatctgtagtcgtagcgaaggatggt
tcaaggctaaaccagtatgatctactaggccacgatattgggaaagaatccatgagttcc
agcacaggagaatatgtagtgatgacaacgtatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctacctcccgtgcatcatgactgtcatcctgtctcaggtctccttc
tggctaaacagagagtcggttcccgcccgcactgtattcggggtcacaacagtgctgacc
atgacaaccctgagtatcagtgccaggaactccctgcccaaggtggcctatgccacagct
atggactggttcatggcggtatgctatgcctttgtcttctctgccctgatagagtttgcc
acagtcaactacttcaccaagcgcagctgggcatgggacggaaagaaggaggcccaggag
atgaggagaagagaatctgcctccctttccaaaaaggccaataacacattcaacattgtc
ggaactacctacaccatcaacgtggtaaaggacccaggtttaaccaccgtctccaggagt
gccaccacagctacacaccaccaccaccaccacagccacaaggtccctaaaatggacgac
aattacgtggaagccataaagtcctacaaccgcgtcagcagagtggacaagatctcacgc
atcatcttccctgtgctgttcttcatcttcaacctggtctattgggccacgtacatcaac
agcaagccgcgcgccatcccctcccccaggtccaccacccacaattag
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