Salmo trutta (river trout): 115154677
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Entry
115154677 CDS
T08542
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115154677
03015 mRNA surveillance pathway
115154677
03008 Ribosome biogenesis in eukaryotes
115154677
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115154677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115154677
03009 Ribosome biogenesis [BR:
stru03009
]
115154677
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115154677
mRNA cycle factors
Stress granule specific factors
115154677
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115154677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
LRR_4
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
115154677
NCBI-ProteinID:
XP_029557011
Ensembl:
ENSSTUG00000023688
LinkDB
All DBs
Position
19:44011797..44030563
Genome browser
AA seq
635 aa
AA seq
DB search
MSTADGSRYYNDHDDRVGGQTFRNRKGRGPFRAHMYSDQGPGAPGTRTRYRGGQKGGGGQ
GPRARFDDEDGDVAMTDSNSQDGSSQHRFNPYGRPNRRGDDRFDRGRRGGGGGGHRGRGN
NRGGDGGGDGRNTWFKIFVPYGKEYDKDWLITALQNISSIPFTPVHYQVEGNRAQFYIDD
SATANALLKVSRKITDKDGYKVTVLMNPCPPPSFLQSELKPADLEHLKQCMAKRFDGSQQ
ALDLNNIRIDPDLVSQNIDVTLNRKNSMHAVIKIIEENIPELVCLNISNNKLFRLDDLSE
LVNKAPNLKTLNLSHNELKTERELDRIKGLKLVELWLERNPLCDYLKDQASYISTVRERF
PRLLKLDGHDLPPPIVFDVEVTPAALPPCKASYFCSEEIKAPILAFLQQYYSVYDSGDRQ
PLLDAYHDGATFSLSMFITMQNPSRCSLGDYHKDTRNLKKLKDPSTRFRLLKHTRLNVVA
FLNELPKTHHDTASLNVDVNTFTNTLLSFTVTGVFKEVEGKSRDSVRAFSRVFITVPAGG
TSLCIVNDELFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLSAFSLMSGMNLEW
SQKCLQDTEWDFNRARQVFTDFKAHGKIPAVAFIK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagccgacggttcacgttactacaacgatcacgatgacagagttggaggacaa
acgtttcgcaaccgcaaaggcaggggcccttttagggcccatatgtatagtgaccagggg
ccaggagcaccggggacaagaacaagatatcgtggtggccaaaaaggcggtggcggccag
ggacccagagcgaggttcgacgatgaggatggagacgtggcaatgacagacagcaactcc
caagatgggtcctcccaacacagatttaacccttacggaaggccgaatcgccgtggtgac
gaccgctttgatcgtggccgcagaggtggcggtggaggaggtcacaggggtcgtggtaat
aacagaggaggggatggaggtggagatggccgtaatacctggttcaagatatttgtcccc
tatggaaaggaatatgacaaagactggctcataacagctctgcagaatatctcctccata
cccttcacgccagtacattaccaagtagagggcaaccgagcacagttctacattgacgat
tccgccactgcgaatgccttgttaaaggtgtcacggaagatcacagacaaagacggctac
aaggtgactgtactgatgaatccgtgtcctccaccttcctttcttcagtctgaactaaag
ccagctgatctggagcacctaaagcaatgcatggctaaacgctttgatggctctcaacaa
gccctggacttgaacaacatccggatagacccagacctggtttcccagaacattgatgtg
acattgaacagaaagaactctatgcacgctgttattaagataattgaggagaacattcca
gagcttgtttgtctgaacatcagcaacaacaagctgtttaggctggatgacctgtcagag
ctggtcaacaaggctccaaacttgaagacactcaatctttctcataatgagttaaaaaca
gagcgtgagctggataggatcaagggtcttaaactggtggagctatggctggagaggaat
cccctttgcgactatttgaaggaccaggcttcttacataagcacggtgagagagaggttc
cccaggcttctcaaactggatggtcatgatctcccacctcctatagtctttgatgtggag
gtgactcctgctgcccttccaccctgcaaggccagctacttctgctcagaagagatcaag
gctcccatccttgccttcctacaacaatactacagtgtgtatgactccggggacagacaa
cctttgttagatgcctaccatgatggagcgaccttctccttgagcatgttcatcaccatg
cagaacccatccaggtgcagtctcggagattaccataaagacactcgcaacctgaaaaag
ctcaaagatccctccacacgattccgcttactgaagcacacccgtctgaatgtggtggct
ttcctgaacgaacttcccaaaacgcaccatgacactgcatcgctaaatgtggacgtcaac
accttcaccaacacgttactgtcgttcacagtcactggagtgttcaaagaagttgaaggt
aaatcccgagactctgtcagagctttctctcgggtgttcatcacagtgccggctggaggg
acaagtctttgcatagtaaacgacgagctttttgtccgtaatgctacgactgaggagatc
cggcgggcctttgttgcacccgccccaacaccatccagcagccctgtccccaccctctca
gctccccagcaagagatgctttctgccttctccctgatgtccggcatgaacctggaatgg
tcccagaaatgcctgcaggacactgagtgggatttcaaccgagcaaggcaggtcttcaca
gacttcaaggctcatggaaagatcccagctgtcgctttcataaagtga
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