KEGG   Salmo trutta (river trout): 115154751
Entry
115154751         CDS       T08542                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115154751
   03400 DNA repair and recombination proteins [BR:stru03400]
    115154751
Spliceosome [BR:stru03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    115154751
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     115154751
SSDB
Motif
Pfam: AAA_33 SPRY SAP AAA_17 Zeta_toxin AAA_18 KTI12
Other DBs
NCBI-GeneID: 115154751
NCBI-ProteinID: XP_029557151
Ensembl: ENSSTUG00000032255
LinkDB
Position
19:45681010..45689833
AA seq 925 aa
MSGINVKKLKVNELKEALQLRGLDTRGLKADLVSRLQSALEAEAAGEGDGPPIADVGEEG
DQQHDTGGDAGDGDDGTNISCSKFKDDGEEEKYIEDDEVQFVSQADSANGDNEQSEEDSR
DGARMCGQVPTVGYGMVDFTEDVMEPQIPQAYESDKRQEPQVLELEMEEPEPVQQEPEPV
QPEPVQPEPEPVQPEPVQPEPEPVQPEPVQQEPEPVQPEPVQQEPLESASIEPVEMPEIK
PEDFVMKAELKKEQDQLKEEKEPQQPRAHHPEPANEWEAEQATQTKTEDNRYNRKRPCDE
GRGYGYYEHREEKRGRSPQPPAEEEEEDFDDTLVAIDTYNCDLHFKVSRDRYSGYPLTIE
GFAYLWSGARASYGVNKGRVCFEMKINEEISVKHLPSSEPDPHVVRIGWSLDTCNTQLGE
EPFSYGYGGTGKKSSKCKFEDYGEKFGENDVLGCYIDFDSGEEVEMAFSKNGKWLDVAFR
VSREELAERPLFPHVLVKNCAIEFNFGQKEEPFFPLPEGYTFIQDVPLENRMRGTVGPAI
KADCELLMMVGLPASGKTTWALKHAEEHPAKNYNILGTNAIMEKMKVMGLRRQKNYSGRW
DVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDED
LKERTLKRTDEEGKDVPDHAVFEMKANFVLPEAGEFLDNVTFIELQREQADTLVKQYNEE
GRKAGPPPDKRFDNRQGGFRGRGAPYQRYDNRGGSQGGRGGYQSQGGNFRGGYNHGGYQQ
NRWGSNRDGAAGGQHGYNRNQQSGVSYNQHHQGQYNKGATGSYSQGQPQTYNQGYNQGNY
NQGYNYGSYSQYPGYSQSYSQTPAASAAPVATGQTYNQQQQTYNQQYQQYAQQWQQYYQN
QSQWNQYYSQYGNYSQGSQGPQGTQ
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgagtggaatcaatgtgaagaagctcaaagtcaacgagctgaaggaggcgcttcagctg
cgaggcctggatactcgtggcctgaaggcggatcttgtctcaaggttgcagtcagcactt
gaggcggaggctgcaggtgagggggacgggccaccgattgccgatgttggggaggagggg
gatcagcaacacgatactggcggagacgctggagatggtgatgacggtacaaatattagt
tgttcaaagtttaaagatgatggggaagaagaaaaatatattgaggacgatgaagtacag
tttgtctcgcaggctgattcggcgaatggtgataatgaacagagtgaagaagacagccgg
gatggggcgcggatgtgtggtcaagtccctacagtgggatacgggatggtcgatttcaca
gaagatgtgatggagccacagattccgcaggcgtatgagtcggacaaaagacaagagccg
caggtgctagaactggagatggaggaaccagaacctgtgcaacaagaaccagaacctgtg
caacccgagccagtgcaaccagaaccagagccagtgcaaccagaacctgtgcaaccagaa
ccagagccagtgcaaccagaacctgtgcaacaagaaccagagccagtgcaaccagaacct
gtgcaacaagaaccactggagtcggcatcaattgagcctgtggagatgcctgaaattaag
ccagaggactttgtgatgaaagcagagttgaaaaaggagcaggaccagttgaaggaagag
aaggagccacagcagccaagggctcatcatccagagccagccaatgaatgggaggctgag
caggcgacccagaccaaaacggaggataaccgatacaaccgtaagaggccatgcgatgaa
ggccgcggttatggatactatgaacatcgggaggaaaaaaggggacgttctccccagcct
ccagcagaggaagaggaagaagactttgatgacactcttgtggccattgatacttataat
tgcgatctgcacttcaaggtatcacgtgaccggtatagtggatacccgctgaccattgaa
ggttttgcatacctgtggtcaggtgcacgagcttcctatggtgtcaacaaagggcgtgtc
tgctttgaaatgaagataaacgaggagatctctgtgaagcaccttcccagcagtgagcct
gatcctcatgttgtgcgcattggctggtctctggacacctgcaacacacagctcggtgaa
gaaccgttctcttatggctatggaggaactggcaagaaatcttccaagtgtaaattcgag
gattacggggaaaagtttggtgaaaacgatgtccttgggtgctacattgacttcgatagc
ggtgaggaagtggagatggccttctcgaagaacggcaagtggctggatgtggccttccgt
gtgtcacgggaggagttggccgagcggccactctttccccacgttcttgtgaagaactgt
gccattgaattcaactttggccagaaagaggagcccttcttccccctgcctgagggatac
accttcattcaggacgtccctctggagaacaggatgcgggggactgttgggcctgccatc
aaggctgactgtgagctattgatgatggttggcctgcctgcgtctgggaaaaccacctgg
gccttgaagcacgcggaggagcaccctgcaaagaactacaacatcctgggcaccaacgcc
ataatggagaagatgaaggtgatggggctgcggcgtcagaagaactattctggtcggtgg
gatgtcctgatccagcaggccacacagtgtctgaacaggctgatccagatcgctgcccgc
aagaagcgtaactacatcctggatcagacaaatgtatatggatcagcccagagacgaaaa
atgcgtccttttgaaggttttcaacgcaaggctattgtaatttgtcccacggacgaggat
ttaaaagagcgaacgttaaagcgaactgatgaggaagggaaggatgttcccgatcatgct
gtatttgaaatgaaagccaactttgtgctcccagaagctggtgagtttcttgacaacgtg
accttcatcgagctgcaacgagaacaggcggacacactggtaaagcaatacaatgaggag
ggccgcaaggccggcccacccccagacaaacgcttcgacaaccgccaaggaggattccgt
ggtcgcggtgcaccttaccagcgctatgacaaccgtggtggctcccaaggaggaagggga
ggctatcagagtcaaggtggcaacttcagaggagggtataaccatggaggctaccagcag
aaccgctgggggagcaaccgtgatggtgctgcaggaggacaacatggctacaaccgcaac
caacaatctggagtgagctacaatcagcaccaccaaggacaatataacaagggagccact
gggagttacagccaaggacagccacagacatacaaccagggatacaatcagggcaactac
aaccagggttacaactacggcagctacagccagtacccaggttacagccagagctacagc
caaactcctgccgcctccgctgctcctgttgccactggacagacctacaaccagcagcaa
cagacctacaaccagcagtatcaacagtatgcacagcagtggcagcagtattaccagaac
cagagccaatggaatcagtactacagccaatatggaaactacagccagggttctcagggc
ccccagggaacacagtag

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