Salmo trutta (river trout): 115154828
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Entry
115154828 CDS
T08542
Name
(RefSeq) neurexin-2-like isoform X1
KO
K07377
neurexin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115154828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115154828
Membrane trafficking [BR:
stru04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
115154828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
115154828
NCBI-ProteinID:
XP_029557317
Ensembl:
ENSSTUG00000008320
LinkDB
All DBs
Position
19:47354053..47675397
Genome browser
AA seq
1659 aa
AA seq
DB search
MISSKALCEGRAVWPLVLTGLLLTVMATALEYEGVPGQWARYGRWEAKATAELSFTLKTN
ISKALVLYLDDGGNCDFLELLITDGRLHLRFTIHCAEPASLHTETRVNDQRWHRVLLTRN
YRATTLVVDNEEKVAEVKSKRSEMVVASDLYVGGISPDVRLSALTSSTVKYEPPFQGLIA
NLKLGENLPVLLDGQSVQNDLEYLCIKQNPCSNRGLCSIHQGEVLCDCTNTGYKGNYCHE
AIQKAEEGLAHMKSNRQAESLQSAQEESVATYKGNEFFSYDLSQTPIQSSLDEISLSFRT
LQRNGLLLHTGKSADYVNLSLRSGAVWLVINLGSGAFEALVEPANGKFNDNAWHEVRVTR
NLRQVTVSVDGILTTTGYTQEDYTMLGSDDFFYVGGSAITADLPGSPVSNNFMGCLKDVV
YKNNEFRLELSRLAAERDPRVSVHGDLTFRCEDVAALEPVTFDTPAAYLTLPRWKTKKTA
SISFDFRTTEPSGLLLFSHGDRRLQGPDRQPERQPRADYFAMELLDGFLYLLMDMGSGSI
KMKASNKRVNDGEWCHVDFQREGRKGLISVNSRSIPFSANEGSEILDLEGDMYLGGLPEA
REGLILPPEVWTAPLNLGYVGCMRDLFMDGRSRDLRRLAEIQSASGVSSFCTRETHIRCG
RDVCANGGQCREGWNRHVCDCTSTGYLGPNCESEATVLSYDGSMYLKVTLPLSMHMEAED
VALRFMSQRAFGLLVATTSQDSADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPEMLLAG
QKLNDNEWHSVKVVRRGKNLHLSVDNVTVEGHMTGAHTRLEFHNIETGIMTERRFISVVP
SNFIGHLQALSFNGVPYLDQCKNGDISYCELNARFGMRRIVADPVTFHSRASCLAFSTLQ
AYASMHLFFQFKTTSLDGLLLFNSGDGSDFIVVELVKGYIHYVFDLGNGPSLMKGNSEKP
LNDNQWHDVVVSRDNNNMHILKIDSRTVTQHSNGARNLDLKGELYVGGVGRSMYSSLPKL
VASRDGYQGCLASVDLNGRLPDMIADALHRVGQVERGCGGLSTTCTEDSCHNQGVCLQQW
EGFSCDCTMTTYRGAFCSDPGTTYIFGRGGALITYTWAPNERPSTRADRLAVGFSTQQKD
AILVRVESTSGLGDYLQLHIEQGKIGVIFNVGTDDITIDEPAVIVSDGKYHVVRFTRSGG
NATLQVDNQPVERYPPGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAAIK
IGGQDKGRPFQGQISGLYYNGLQVLTLAAESDPSVQAEGNLRLVGDSLSVLTTETTSTTP
LAASDMSTTIMETTTTMATTTTRRQRSPSMRESISQSQNSDDILVASAECPSDDEDLEEC
EPGTGGELVLPIITVDSLEPPSIATRYPAIPPPPTSLSPLETTKESLMLSNPHPPCPPDQ
EDCGDPVEVSAFGSGELTESDDEDFYKNSPLVTDRTVLHPPPPPAVGEGGAQKPHNSRPP
PYAPTTNPDQLHIPAGKMNTRDQVLLPPAPPSSRYTPGLTYPPNFPHVPTADPTAPGEKV
MHPGLVDRIGESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQTDQGHNFISNP
VSEGNGAMVKLEKTPSTTTATVAKTVTKGKKNKDKEYYV
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgataagtagcaaggcgctatgtgaaggccgggccgtgtggcccctggtattgacaggg
ctgttgttgacagtcatggccacggccttggagtacgagggagtccctggccagtgggcg
cggtacggccgctgggaggccaaggccacagccgagctgagcttcactctgaagaccaac
atcagcaaggccctggtgctctacctggacgacggagggaactgtgacttcctggagctg
ctgatcacagacggccggctgcatctgcgcttcaccatccactgcgcggagcctgcctcc
ctgcacacggagacccgcgtcaacgaccagcgctggcaccgcgtgcttctcacccgcaac
tatagagcgaccaccctggtggtggacaacgaggagaaggtggccgaggtcaagtccaag
aggagtgagatggtggtggccagtgacctttacgtaggcggcatctcgccggacgtgcgc
ctatctgccctcacgtccagcaccgtcaaatatgagccacccttccagggcctgatcgcc
aacctgaagctgggggagaacctcccagtgctcctggatggccaaagtgttcagaatgat
ttggaatacctgtgtattaaacagaacccctgcagcaacagaggcctctgctccatccac
cagggagaggtcctctgtgactgcaccaacaccggctacaagggaaactactgccacgaa
gctatccagaaagcagaggaaggtctggcgcacatgaagtcaaaccgccaagctgaatca
ttgcaatctgcacaagaggagtcagtggccacctacaaaggcaacgagtttttcagctat
gacctgtctcagacgcccatccagagcagcctggacgagatcagtctgtccttccgcacg
ctgcagaggaacggactcctgcttcacaccgggaagtcagctgactacgttaacctatcc
ctgaggagcggcgctgtgtggctggtcatcaacctcgggtccggggcctttgaggccctg
gtggagcctgccaacggcaagttcaacgacaacgcctggcacgaagtccgtgtcacacgc
aacctgcgccaggtgaccgtctctgtggatgggatcctgaccaccaccggctacacccag
gaggactacaccatgctaggctcggatgacttcttctatgtcggcgggagtgccatcaca
gctgacctccctggctccccggtcagcaataacttcatgggctgtctcaaagacgtggtc
tacaagaacaacgagttcaggctggagctgtctcgtctggctgcagagcgggaccctcgg
gtcagcgttcacggcgacctgaccttccgctgtgaggacgtggcggccctggagccggtc
accttcgacacgcccgccgcctacctcaccctgcccaggtggaaaaccaagaagactgcc
tccatctcttttgacttccgcactacggagcccagcggcctgctgctgttcagccacggt
gacaggcgtctgcagggcccggacagacagccggagaggcagcccagggccgactacttt
gctatggagctcctggacggcttcctctacctgctgatggacatgggctccggcagcatc
aagatgaaagccagcaacaagagggtcaacgatggggagtggtgccacgtggacttccag
agggaggggcgcaagggcctgatctcagtgaacagccgcagcataccattctctgctaac
gaaggcagtgagatcttagacctggagggggacatgtacctcgggggtctgcccgaggca
cgcgagggcctcatcctccccccagaagtctggacggcccccctcaacctgggctacgtg
ggctgcatgcgggacctgttcatggacgggcggagccgggacctgaggagactggcggag
atccagagtgcctctggagtcagcagcttctgcaccagggaaacgcacatcaggtgtggc
agagacgtctgtgccaacggtgggcagtgccgcgagggctggaaccgtcatgtgtgtgac
tgcaccagcacgggctacctgggccccaactgtgagagcgaggccacggtgctgagctac
gacggcagcatgtacctgaaggtgacgctgccgttgagcatgcacatggaggccgaggac
gtggcgctgcgctttatgtcccagagggcctttgggctgcttgtggccactacctcccag
gactcagctgacaccctgcgtctggagctggacgggggccgggtcaaactcaccgtcaac
ctggattgtatcaggatagactgtaacctcagtaaaggcccagagatgctgttagcggga
cagaagctgaacgacaatgagtggcactcagtgaaggtggtgcgtcgtgggaagaacctg
cacctctctgtggacaacgtgactgtggaaggccatatgaccggtgcccacactcgcctg
gagttccacaacattgagacgggcatcatgaccgagcgccgttttatctccgtggtgcca
tctaacttcatagggcacctgcaggccctctcgttcaatggcgtcccctacctggaccag
tgtaagaacggagacatctcctactgcgagctcaacgcccgcttcggcatgcgccgcatc
gtggctgaccctgtgacgttccacagtcgagctagctgcctggccttctccaccctgcag
gcctacgcctccatgcacctcttcttccagttcaagaccaccagcctcgacggcctgctg
ctcttcaactctggagacggcagtgacttcatcgttgtggagctggtcaaagggtacatt
cattacgtgtttgacctgggcaacgggccgtcgctcatgaagggcaactctgagaagcct
ctcaacgacaaccagtggcacgacgtggtggtctcccgggacaacaacaatatgcacatc
ctcaaaatcgactcccgcaccgtcacccagcactccaacggagcccgcaatctggatctc
aaaggggagctgtatgttggtggtgtggggaggagcatgtacagcagcctgcccaagctg
gttgcgtcccgggacgggtaccagggctgcctggcctctgtggacctgaatgggagactc
cctgacatgatagcagatgccctccacagggtgggccaggtggagcgcggctgtggaggc
ctgagcacaacctgtacagaggactcctgccataaccagggggtgtgtctccagcagtgg
gaaggcttctcctgtgactgcaccatgaccacctacagaggagcattctgcagtgaccct
gggaccacgtatatctttgggagaggaggggccctcatcacgtacacctgggcccccaac
gagcggccgagcaccagagcagaccggctagctgtgggcttcagtactcagcagaaagac
gccatcttggtccgagtggagagcaccagcggactgggagactacctgcagctacacata
gaacaaggaaagattggcgtgatcttcaacgtggggacagatgacatcaccattgacgag
ccggctgtcatagttagcgatggcaagtaccatgttgtgcgcttcacacgcagtggtggc
aacgccaccctccaggtggacaaccagccggtcgagcgctacccaccagggaactttgat
aatgagcgcctggctattgctagacaaagaatcccataccgactcggtcgggtagttgac
gagtggctactcgacaaaggacgacagctgaccatcttcaacagccaggcagcgataaag
atcgggggtcaggataagggccggccgttccagggccagatctccggcctctactataac
ggcctgcaggtgctgacgctggcggcagagagtgaccccagtgtccaggctgaggggaac
ctgaggctggtgggagactccctgtctgtgctgaccactgagaccacctccaccacccca
ctggcagcctccgacatgtccaccaccatcatggagaccaccaccaccatggccaccacc
accacccgcaggcaacgctcccccagcatgagggagagcatctcccagtctcagaactcg
gatgacatcttggtggcttctgctgagtgtcccagtgatgacgaggacctggaggagtgt
gagcctggaacaggaggtgaattagtgttgcctataataacagtggattcccttgagccc
ccatccatcgccacccgttaccctgctatcccccctcctcccacctccctgtccccactt
gagaccaccaaagagtccctgatgctgtccaaccctcaccctccctgccccccggaccag
gaggactgcggtgaccctgtggaggtctcggccttcggttctggggagttgacggaatca
gatgatgaggacttttacaaaaactcccctctggtcactgacaggacagtcctgcatcct
cctcctccccccgctgtcggtgagggcggggcacagaaaccccacaattcccgcccccct
ccttatgctcccactaccaaccctgaccagctccacatccccgcgggcaaaatgaacacc
cgtgaccaggtgcttctgccccctgcccctccgtcatcccggtatacacctggactaact
tacccccccaatttcccccatgtgcccacagccgaccctacagcccccggtgagaaggtc
atgcaccccggcctggtggataggatcggagagtccagtagcaccacagggatggtggtt
ggcattgtggcagctgctgccctctgcattctcatcctcctctacgccatgtacaagtac
cgcaaccgtgacgagggctcctaccagacggaccagggacacaactttatcagcaatcca
gtttccgagggcaacggggccatggtcaaactagagaagacaccaagcacaaccacggct
acagtagctaagacagtaaccaagggcaagaagaacaaagacaaagagtattatgtctaa
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