Salmo trutta (river trout): 115154888
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Entry
115154888 CDS
T08542
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115154888
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115154888
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115154888
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115154888
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115154888
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115154888
CD molecules [BR:
stru04090
]
Proteins
115154888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
BARF1_ig2
Motif
Other DBs
NCBI-GeneID:
115154888
NCBI-ProteinID:
XP_029557436
Ensembl:
ENSSTUG00000039586
LinkDB
All DBs
Position
19:49093283..49118016
Genome browser
AA seq
978 aa
AA seq
DB search
MLFLTLLLGIMVCCTAQEQSPPVIKLNSVVLREAEWTIPIGTSSFTLTCEGYSTVTWSTT
AFKLMRNTRLGSVITTRRLTVDYTGTYKCMYENQPDLISEVHIYVKDPHNILVTPRTLGD
VKEGSDVLLCQLTNPIATDLSVRKANGDPTPPDMNYTVNPKRGILIRYLLTSHSADYVCS
AKINGVTRVSKVVPIFVIQRLRLPPSVLIEVDGYVRIVGERLLILCITSNPNHFYNVTWK
HSSLEALDFSRKIIQEDQTNQVHITSSVTIPAVAMSHTGNFTCTAINEAGFNSSTTYLQV
VDKPYIRLIPRLSPDLYLNGSLVEVNEGENLEINIQIEAYPQIKEQWWDIPMSHNHNIST
HDDTWAVRYNNRYESSLLLQRVRSEERGQYTLHTRSTCLNGSITFNVQVYQKPSAMVRLK
NVTTLTCTASGYPAPTILWYQCPGIKTTCDGDNDTVEVQPLLTSTMEVQSELTLSPSSME
VTVECVTFNLVGKERDIFVLRVPAVISPEFVTSKLFTPTFIGATSTAALLFLLLVIVLYK
YKQKPKYEVRWKIIEANDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILGAGAFGKVVEA
TAYGLGTNDNMTTRVAVKMLKPSAHSEEREALMSELKILSHLGSHDNIVNLLGACTQGGP
MLMITEYCSYGDLLNFLHGKAKLFLYSIPSGPGNPEVPRVPKNSDHYKNTCAQESRVRSD
SGISCSSSDNYLDMHPAQRPKHCPMGSLCEDPETGTWSLDIEDLLRFSSQVAQGMDFLAS
KNCIHRDVAARNVLLTDGRVAKICDFGLARDIENDSNYVVKGNARLPVKWMAPESIFECV
YTVQSDVWSYGILLWEIFSLGKSPYPNVVVDTRFYKMIKDGCHMSQPDFAPPEIYTIMKM
CWNLEPTERPTFSTIGQLIQRLLPDQPDHTYRNVQDKTPQQEAGEQGDPAKMNEDCDQTL
NQEGEEEPLMKKNNYQIC
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctaacccttctcctgggcatcatggtctgctgcacagcccaagagcagagc
cctccagtgatcaagctgaactcggtggtgctgagggaggctgagtggactatccctatt
ggaacctcatctttcaccttgacctgtgagggatacagcacagtcacctggtcaaccaca
gcattcaaactcatgaggaatactagattggggagtgtgattaccaccaggcgccttaca
gtagactacactggcacatacaagtgcatgtatgagaaccaaccagacctcatctcagag
gtccacatctatgtgaaagatccccataacatcttggtgacccctcgaaccctgggagat
gtgaaggagggcagtgatgttctcctctgtcagctgacaaaccccatagccaccgaccta
tccgtccgtaaggccaacggagaccctacaccccccgacatgaactacactgtcaaccca
aagagaggaatcctcatccgataccttctgaccagccacagcgcagactacgtctgcagt
gcaaagatcaatggggtcacgagagtctccaaagttgtcccaatcttcgtcattcaaagg
ttgcgtttgccaccgtctgtgttaattgaggtagacgggtatgttcgtattgttggagag
cggctcctgatcctctgcatcaccagcaaccctaaccacttctacaacgtgacgtggaaa
cactcctccctcgaagcattggacttctcacgtaaaataatacaagaggaccagactaat
caagtgcacatcaccagtagtgtgactatcccagctgtggccatgtctcacacaggaaac
ttcacctgtacagccataaatgaggctgggttcaacagctccaccacctacctgcaggtt
gtagataagccttacattaggctcataccccgcctgtcaccagatctctacctaaatggc
tccttagttgaagtgaacgaaggagaaaaccttgagataaacattcagatcgaagcgtat
ccccaaatcaaggagcagtggtgggacatccccatgtctcacaatcacaacatctccact
catgacgacacatgggccgtccgatacaataacaggtacgagagcagcttgctgctacag
agagtgaggtctgaggagagaggccagtacaccctccacactaggagcacatgcctcaac
ggctccatcaccttcaatgttcaagtctaccagaaacccagtgccatggtcagactgaag
aatgttaccaccctgacctgcaccgcctctggatacccagctcccacaatcctctggtac
cagtgcccaggaataaaaaccacgtgtgatggtgataatgacaccgtggaggtgcagcct
cttctcaccagcaccatggaggtgcagagtgagctgaccctcagtccctcaagtatggag
gtcacagtggagtgtgtgacctttaacctggttggtaaagagcgggacatcttcgtattg
cgtgtccctgctgtgatttcaccagaatttgtaacgtccaagctgttcacacccactttc
attggagccaccagcacagcagcccttctgttccttctgcttgtcattgtcctgtacaaa
tacaagcagaaaccaaaatatgaagtccggtggaagatcattgaggccaatgacgggaat
aactacacctttattgatcctacacaacttccttataacaagaagtgggagttccctcgt
gataagctgaggcttggccagattctgggagcaggggcttttgggaaagtagtggaggcc
actgcctatggtctggggaccaatgacaacatgaccacacgcgtggcagtaaagatgctc
aagccaagcgcccactcagaagagagagaagctctgatgtcagaactgaagatcctcagt
cacctgggatctcatgacaacattgttaacctgttaggggcatgtactcaaggaggccca
atgctgatgatcacggagtactgcagctatggcgacctgctgaacttcttgcatggcaag
gccaagctgttcctgtactctatcccgagcggaccagggaatccagaggttccacgggtt
ccaaagaacagtgatcactacaagaacacatgtgcacaggagtcccgtgtaaggagtgac
agtgggatctcgtgctccagctcagacaactacctggacatgcatccagcgcagagaccc
aaacactgtcctatgggttccctatgtgaggatccagagacaggcacctggtcgctggac
atagaagacttgttgaggttctcctctcaggtggctcagggaatggacttcctggcatcc
aaaaattgcattcacagggacgtggcggctaggaacgtcctcttgaccgatggccgcgtg
gctaagatctgcgactttggcctcgccagagacatcgagaatgactccaactatgtggtg
aaaggaaacgcccgtctgccagtgaagtggatggcccctgagagcatttttgaatgtgtg
tacacagtgcagagtgacgtctggtcctatgggatactgctgtgggagatcttctctctg
ggtaaaagcccataccctaatgttgtggtggacacccggttctacaagatgatcaaagat
ggatgccacatgtctcagccggactttgcccctccagaaatatacaccatcatgaagatg
tgctggaacctggaaccaacagagcgtccaaccttcagtaccatcggccaacttatccag
aggctactgcctgaccagccagaccatacctacaggaatgtgcaggataagactccacag
caggaggcaggagagcagggggacccagctaagatgaatgaggattgtgatcagacactg
aaccaggagggagaggaggagcccctgatgaaaaagaacaactaccagatctgctga
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