Salmo trutta (river trout): 115154908
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Entry
115154908 CDS
T08542
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115154908 (scrib)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_9
AbLIM_anchor
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
115154908
NCBI-ProteinID:
XP_029557479
Ensembl:
ENSSTUG00000017075
LinkDB
All DBs
Position
2:37651602..37785851
Genome browser
AA seq
1918 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKALPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLTHNLLVVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGNVPDELGGCASLNVLSLRDNRVAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLTENQSQPMLKFQTEDDESTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYISSLDGEPESPGIEEKRLSNLSNQSHDSEASNSTASANSHEERRC
MITTARESLVGGRGEEDEVLDEMEVEYVEPTVHFAEEPIYRGGNEDGEDEEGGDGVPCSD
LEEQRPQFPSEKQRLIRKDTPHYKKHFKITKLPKPESVAALLQGFSPDAHLAQHPTSHHP
DPEEEEEEEYMVTPQRHNRIEEPEQEDRSLLHVNSSLQPVKGVSFDQVNNLLIEPARIEE
EEHTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKVGDKLLEVN
GVVLQGAEHHTAVEALRSSGATVSMSVLREHMVEPENAITTTPLRPEDDYFPRERRASGL
PFCIEAGSPAGLRHRLSTCLVRNDMGLGFSIAGGKGSTAYRAGDMGIYISRIAEGGAAHR
DCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTAGGSPGLSRA
RAHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPLEDEYPIEEVVLVKAGGPLGLSIVG
GSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVRALLS
NKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFISKVS
SSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVCVLRAVGDTLVMLVCDGFDPGNAAAI
EASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWEREEMEKV
ERMRLEREEDARLLEEETENLGTGPLKLDYRTLAALPTTALQKVNRAPSTDHPRTDSPIR
DAPYSPSTQPASIHFTPTALPAKENISPLSPYETRPGAIQPLSRGGGRPITSPATPDGHS
SPNPFQHGPTPINSQTFLQSRALSPDTIDEFPLNPKQAYKAFAAVPHSLAVLETPPQDLF
GQRNNVHFNQPSPSPEPELNNEVFEDEVEGDGGMGMGQAAPVSPRPSLSSDCRDYMSLAA
VPRLSRASMDMVVKTPSPGGRDNLEQRSFRDRQKYFEIDMKQQTPDTKPKGRVSLVGADD
LKKMREEEERRFEQRAREYLMDEDDEEEDDLVKQMGVLKATGKVLLDGVEYKVEPVATPP
SYSTTPPSYCGSSGPSSVDGNGDYQRNSLEESFRLEQQRPHSMTGLIPVYPGESGAPIRT
AKAERRQQERLRMQSPELAPAGDKDLSPSEKRALEAEKRAMWRAARPYGLEEDVRQYEQD
LAKRLYQSRVRASQGTAPPPQSQNAAASSAASQLRMKSLEQDALKAQMVIAKSREGKKRG
TLDQLAESPSPAPTPSPTPLEDFSPQGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQS
PDVVDDIQLIDDGSSNPVHVADPGTEVPTATSALEMALYSNTRKLRQGCRSLETAVPT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcggtggacaagcga
cattgtaatttgcaaaatgtcccagacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ctgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagcttgacatttccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcattggagattgcagacttcagtggaaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcgcttaacgacgtctcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaaggccctgcccacgtcactctctttcctggtgaaactggaacatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacgg
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactagtgtgtctagacgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctcacacacaacctcctggtggtggtccccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaagaagctgaccaacctgaatgtcgac
cgcaaccggctgggcaacgtgcctgatgagctgggtggttgtgccagcctcaacgtgctc
tccctcagagacaaccgcgtggccaaattgcccgctgagctggctgacgccaccgagctc
catgttctggacgtggcagggaacaggttacagaacctaccgtttgccctggccaacctc
aacctgaaggccatgtggctgacggagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggagaaggtgctcacctgctacctgctgccccagcagccc
tcccccagcctggagaacctgctgcaaaacagtgtggacgacagctggatagacagcaac
ctgaaccgggtgtcagtaatccagttccaggaagagactaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggaaaagaggaacgaggcctacatatccagtcttgat
ggagagccagagtctcctggtattgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgaggcgtccaacagcacagcctctgccaactctcacgaggagagacggtgc
atgattaccacagcgagggagagcctagtgggtgggcgtggtgaggaggacgaggtgcta
gacgagatggaggtggagtatgtagagcccacggtgcactttgcagaggagcccatatac
cggggtgggaatgaggacggtgaggatgaggagggtggggacggggtcccatgcagcgac
ctagaggaacagaggccccagttcccttcggagaagcagcgtctgatcaggaaggacacg
ccgcactacaagaagcacttcaagattaccaagctgcccaaacccgagtcagtggccgca
ttactgcagggcttcagccccgacgcacacctggcccaacaccccacctcacaccaccct
gaccccgaggaggaggaagaggaggagtatatggttactccacagcgccacaacagaata
gaagagccagagcaggaggataggagtctgcttcatgtcaactcttccctgcagccggtc
aagggggtgtcatttgatcaagtcaataatctcctgattgagcctgctcgaattgaggag
gaagagcacaccctgaccattctacggcaaactgggggcctgggcatcagcatagccgga
ggacagggatccaccccgtacaagggggatgatgagggaattttcatctccagggtgtct
gaagagggccctgcagcacaggctggggtcaaagtgggagacaaactcctagaggtgaac
ggtgtggttctccagggggcagagcaccacacggcggtagaggccctgcgcagctcgggc
gccaccgtctccatgagcgtcctccgggagcacatggtggagccggagaacgccatcacc
accacaccgctgaggcccgaggatgactacttcccccgggagagacgggccagtggcctt
cccttctgcattgaggcaggctcccccgcaggcctccgacacaggctgtctacctgcctg
gtccgcaacgacatgggtctgggcttcagcattgccgggggcaaaggctccacagcctac
cgcgcaggggacatggggatctacatctcgcggatcgcagagggaggggcggcccacaga
gactgcacactccgagtaggggacagggtcatcaccatcaatggtgtagacatgacagag
gccaggcatgaccaggcagtagcgctgcttaccggcacctctcccaccattgctctcctg
gtggagcgtgaccaggccgagccgggcaccgcagggggctccccgggcctgtcccgtgcc
cgcgcccactcccccccacctccagagccctctgactcacccgaccaggaagagggcaac
gatgactcgagcctcttgccccacgggaaccacctgagccagccgctggaggacgaatac
cccatcgaggaagtggtgttggtgaaagcgggcggccccctgggactgagcatcgtggga
ggcagtgatcacgccagtcacccgtttggcattaatgagcctggtgtcttcatctctaag
gtgatcccccatggcttggcgtgtcagagtgggctgcgggtgggggacaggatactggag
gtgaacaccatcgacctgcgccacgccacccaccaggaggctgttagagccctgctctcc
aacaagcaggagatccgcatgctggtgcgcagggacccctcgcctcccgggatggaggag
atagtgatccagaagcagcctggagaaaagctgggcatcagcatacgcggcggtgccaag
ggccacgctggcaaccccttcgacgccaccgatgagggcattttcatatccaaggtgagc
tccagcggtgcggcggccagggatggccgtctgcttgtgggaatgcggatcttggaggtg
agtaaccacagcctgctgggcatgacccacacggaggctgtatgcgtgctccgcgccgtg
ggagacaccctggtcatgctggtgtgtgacggcttcgaccctggcaacgctgccgctata
gaggcgtcaccgggcatcattgccaatccgtttgcagcaggcatcgtgcgtaagaacagc
atggagagcatctcctctatagaccgagacctgagtcccgaggagatggacatcctacag
aaggaggtggagatggtgcgagagacgtcccagtgggagagagaagagatggagaaggtg
gagcgcatgcgcttggagcgtgaggaggatgctcgcctgctagaagaggagaccgagaac
ctgggcactgggcctctgaaactggactaccggacgctggccgcactgcccaccaccgct
ctgcagaaggtcaacagggcgccctccactgatcaccccaggacagacagtcccattaga
gacgccccctactcaccgagcacacaaccggcaagcattcatttcacccctacggcactg
cctgccaaggagaatatctcaccactgagtccctatgagacaaggccaggtgccatccag
cccctctcccgtggtggcgggcggccgatcacctcgccagccactccggacgggcacagc
agtcccaatcccttccagcatggccccacccccatcaactctcagacctttctgcagtct
cgtgccctctcccccgacacaatcgatgagttccccctgaaccccaagcaggcatacaag
gcatttgccgccgtgcctcactcgctggccgtgctggaaactcccccgcaggatctgttt
ggccagaggaacaacgtccacttcaatcagccttccccttctccagagcctgagctgaac
aacgaggtgtttgaggatgaggtagagggggacggaggaatgggtatgggtcaggcagcc
cccgtctctccccgaccctccctctcctctgactgtcgggactatatgagtctggcagca
gtgccacgcctctccagagcctccatggacatggttgtaaagactccatcacctgggggc
agagacaacctggagcagcgctccttcagggacagacagaagtactttgaaatcgacatg
aagcagcagacacctgacaccaagcccaaaggccgcgtgtccctggttggagcagacgac
ctgaagaagatgagggaggaggaagagaggagatttgagcagcgggcacgggagtacctg
atggatgaagatgacgaggaggaggatgacctggtgaagcagatgggagtgttgaaggcc
acgggcaaagtgctgctggacggggtggagtacaaggtggagcctgtagccacgcccccc
agctacagcaccacaccccctagctactgtggcagctcagggccctcgtcagtggatggt
aatggagactaccagaggaattccttagaggagagcttcaggctggagcagcagaggccc
cactccatgactggtctgatcccagtgtaccctggagagtcgggggctcccatccggacg
gccaaggcagaacggaggcaacaggagcggctgaggatgcagagtccagagctggcccca
gctggagacaaggacctctctccctccgagaaacgggctctggaagccgagaagagagcc
atgtggagggcagcaaggccctatggcctagaggaggatgttaggcagtatgagcaggac
ctggctaagaggctctaccagtcgcgagtgagggcgtctcagggcaccgcgccaccccct
cagtcccaaaacgccgccgcctcttccgctgcctcccagctcaggatgaagtctctggag
caggatgctttgaaggctcagatggtcatcgctaagtcccgggagggaaagaagcgtggc
acactggaccagctggccgagtcgccctcacccgcccccacgccatcccccacccctctg
gaagatttcagtccacaaggagtgacgtcacctggcagactgtccctgtcggaaaagaag
tttgactaccgacagtttgctgccattccttcttccaaacccgtatacgacatccagtcc
cctgacgtggtcgatgacattcagttaattgacgatggctccagtaacccagtgcatgtt
gcggatcccgggactgaggtgcccactgccacctcggcgctggagatggccctctacagc
aacacgcgcaagctgaggcagggctgccgcagcctggagaccgccgtgcccacataa
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