Salmo trutta (river trout): 115154921
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Entry
115154921 CDS
T08542
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115154921
03036 Chromosome and associated proteins [BR:
stru03036
]
115154921
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115154921
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115154921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_9
S1_RRP5
HHH_3
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
115154921
NCBI-ProteinID:
XP_029557497
Ensembl:
ENSSTUG00000044587
UniProt:
A0A674DZ38
LinkDB
All DBs
Position
19:50261452..50336939
Genome browser
AA seq
1757 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQVFMDDEEEEEELNTEDQDEHGNLRGLIDDDVDE
DEEAEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDEDLDLIEENLGVKVKRRKKKYDR
VKLMDDDEDDEKDQIADEIFHGGDDDGEGELEEGETVDPPLRRHGERHDEEEEEEEGEEE
SDIDDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFAEFDADGAYDQGEEEE
EDQDEEGWDRPKKQTKRRVGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIP
VKPAEDNELEEEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNF
MRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQSHQY
EQISADPDKPLADGIRPLDTADIERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNTAKAA
NKKKKLRKIKEVNEDGEEEEVEVEEEEEQKGPDLKLASRRDMYSICRSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFNSPEAVLEGTRYMVAMQISREPL
VRHVLRQTFQERAKININPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGEQFLKMCQAEE
EGLLTIDICIDLLGVKGFAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQFL
YPQMAKELKNKLIAEAKDNIIKSCCRRLYNWLKVAPYRPDQQAEEEDNDLMDESQGKGIR
VLGVAFADSRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWREDERDKKLQDIVNLKKFL
ISKKPHVVAVAGENRDAHMIMEDIKRTVSELEQESSLPAVGVELVDNELAVLYMNSTKSQ
TDFRDYPPLLRQAVSVARKIQDPMVEYAQVCSTDEDILCLKLHPLQEHVVKEDLLNALYC
EFINRVNEVGVDVNRAISHPYTQSLVQFVCGLGQRKGSHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVP
YRAPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDSTGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVRSRMDNGVQGFIPTKFLSDKVVKHPEERVKVG
MTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDTYYDFDAETEDTKAEEELKKKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQH
VDVREEGKENAFSLGHTLWIYTEEFEDLDEITARYIQPMAAFARDLLGHKYFQDCNGGDK
KKMEELLIRCKKEKPAFIPYFVSACKDLPGKFILGYQPRGKPRVEFVTISPDGFRYRSQM
FPTVNGLFRWFKDHFQEPVPGITPSSSSSRTRTPASVNATPANINIADLTRAVNALPRNM
TSQMFSAIAAVTGQGQGQNANTTPAQWGSSQYGYTGGSSGDGGGNSSAYHVFATPQQPMA
TPMMTPSYSYTTPSQQTMGTPQYPSSTPLSSHGHTQSSQGHAHQGHNSSNSHHGHSSNTP
FSSTSSRGRTPQQPKSSGSTAVDWAKMAEQWLQDKEAERKKQKTPRMTPRPSHSPMIEST
PMSIAGDATPLLDEMDR
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgacagcgaggctgaggagtcagaggaggaatttgaggagaaagac
ctgaagcccaaaaagacccaggtgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgagggggctcatcgatgatgatgtggatgaa
gatgaagaagcggaagaaaagaagagcggaggagcgggtagcggcagcgactcagaggat
gaagtcagacacaggcgcaagaaacgcaactatgatgactacctggatgatgaggacctg
gacctcattgaggagaacttgggggtcaaagtcaagaggaggaagaagaagtatgaccgc
gtgaagctgatggatgatgatgaagatgacgaaaaggaccagatagcagacgagatcttc
cacggaggagacgacgacggagagggggagctggaggagggagagaccgtcgacccgccc
ctccgtcgccatggtgaacgccacgatgaagaagaggaggaagaggaaggagaggaggag
tcggatattgacgactttattgtggacgacgatggccagcccatcacaaagaagagaggc
aagaagttctcaggatacacggacgcagccctccaggaggcccaggagatcttcggcggt
gactttgactttgcagagtttgatgctgacggagcatatgaccagggtgaggaagaggag
gaggaccaggatgaagagggctgggaccggcccaagaagcagacgaagaggagagtgggg
aggaagagcatcttcgagatctatgagcccagcgagctggagagtagtcacatgacagac
caggacaacgagatccgctccacagacatgccagagaggttccagctgcgctccatccca
gtgaagcctgctgaggataatgagttggaggaagaggcagagtggatctacagaaatgcc
ttttcaacccccaccatctccatgcaggagagtacagactacctggacagagggaccacc
acaaacttcagcaggaaaggccccagcaccatcgctaagatcaaggaggccctcaacttc
atgaggaaccagcactttgaggttccgttcatcgcgttctacaggaaggagtacgtggaa
ccggagctcaacatcaacgacctgtggaaggtctggcaatgggacgagaagtggtgccag
ctgaagagcaggaaacagaacctgacacgactgttccggaggatgcagtcgcaccagtat
gaacagatctctgccgaccctgacaaacccctagctgatggtatcagacccctggacacg
gctgatatagagagactgaaagacgtccagtccatagatgagctgagtgatgtgtacagc
cacttcctgctgtactacggcagagacatccccaagatgcaaaacacagccaaggccgcc
aataagaagaagaagctgaggaagatcaaggaggttaacgaggacggggaggaggaagag
gtggaggtggaggaggaggaagagcagaaggggccagacctgaagctggcatctcgtaga
gacatgtacagcatctgtcggagcgcagggctcgacggcctggctaagaagtttggtctg
actccagagcagtttggggagaatctgagagacagctaccagcgccacgagacagagcag
ttccctgccgagcctttagagctggccaaagactacgtctgcagccagtttaacagtcct
gaggcggtgttggaggggactcgttacatggtggccatgcagatttccagggagcctctg
gtcagacacgtcctcagacagaccttccaggagagagccaagatcaacatcaatcccacc
aagaaaggaaagaaggatatggatgaggcccattttggctactccttcaagtacctgaaa
aacaagccagtgaaggagctgaacggagaacagtttttaaagatgtgccaggctgaggag
gagggccttctcaccattgacatctgcatcgacctcctaggagtcaaagggtttgcaggt
gaccagacgtactttgatgagatcaagcaattctattacagagatgagttcagccaccag
gtgcaggagtggaacagacagaggaccctggccatcgaacgctccctcacacagttcctc
taccctcagatggccaaggaactcaagaacaaactcatcgcagaggccaaggacaacatc
atcaagtcgtgttgcaggaggctgtataactggctgaaggtggctccctacagaccagac
cagcaggcggaggaggaggataatgatctgatggatgagagtcaaggaaagggcatcaga
gtcctgggagtggcctttgcagacagcagagacacgccagtgttctgttctctgatcaac
ggagagggagaggtggtggacttcctccgtctgccttacttcctgaagaggaggaatgca
tggagggaggacgagagggacaaaaagctccaggacattgtgaacctaaagaagttcctg
atcagtaagaaacctcacgtggtggctgttgccggggagaatagagatgcccacatgata
atggaggacattaagaggacagtgagtgagttggagcaggagtcttctctacctgctgtg
ggagtggagctggtggacaacgaactggccgtgctttacatgaacagcacgaagtctcag
actgacttcagggactaccctccgctgctgcgccaggccgtgtccgtagccaggaagatc
caggatcccatggtggagtacgcgcaggtctgcagcacagacgaagacatcctctgcctc
aaactacaccctcttcaggagcatgtagtaaaggaggacctgctgaatgctctgtactgt
gagtttattaaccgggtcaacgaggtgggggtggatgtcaacagggccatatctcacccc
tacacacagagcctggtccagttcgtctgtggcctcgggcaaaggaagggatcgcacctg
ctcaagatcctaaaacagaacaacactcgtttggagaacaggactcagctggtcaccatg
tgtcacatgggccccaaggtcttcatcaactgtgccggcttcatcaagatagacaccgcc
tcgcttggagacagtacggactcatacatcgaggttctggacgggtccagggtgcacccg
gagacgtatgagtgggccaggaagatggcggtggacgctctggaatacgatgagtccgcg
gaggatgccaacccggccggtgcgctagaggaaatcctggaaaacccggagcgactcaaa
gacctggatttagatgcctttgctgaggagctggagagacagggttacggtaacaagggc
ataacgctgtatgatatccgtgctgagttgagctgcaggtataaggacctgagagttccc
tacagagctcctaacaccgaggaggtgtttaacctgctcaccaaggagacacctgagacc
ttctacataggtaagctgatcacaagtgtagtgacaggcattgctcaccggcgcccacaa
ggggagagttatgaccaggccatcaggaacgactctaccgggctgtggcagtgccccttc
tgtcaacaggacaacttccctgaactcagcgaggtgtggaaccattttgacagtggatcg
tgtccgggccaggccatcggtgtgaggtctcgaatggacaacggtgtccagggcttcatc
cccaccaagttcctcagtgacaaggtggtcaagcatcctgaggagagggtcaaggtgggt
atgacagtacactgtcgcatcatgaagattgacattgagaagttcaacgtggacctgacg
tgtcgtacgtctgacctgatggataagaacaacgagtggaagcttcctaaggacacctac
tacgactttgacgcagagacagaagacactaaggcagaggaggaactcaagaagaaacaa
cagagaaccacctatataaagcgtgtcatcgcccatccatcgtttcacaacatcaacttc
aagcaggctgagaagatgatggagtccatggaccagggagatgttgtaatcaggcccagc
agcaagggagaaaaccacctcactgtcacatggaaggtggctgatggtatctaccagcat
gtggatgtgagagaggagggcaaggagaacgccttcagcctgggacacacactctggatc
tacacagaggagtttgaggatcttgatgagatcacagctcgttatattcagccaatggca
gcgtttgctcgcgacctcctgggacataagtacttccaggactgtaacggaggggacaag
aagaaaatggaggagttgttgattaggtgtaaaaaggaaaagcctgcgttcatcccctat
tttgtctcagcctgtaaagacctgccagggaagttcatactggggtaccaacctcgtgga
aaaccacgtgttgagtttgtgaccatcagtcctgacgggttccgctaccgctcccagatg
ttccccacagttaacggactgttccgctggttcaaagaccatttccaggaaccggtacca
ggcatcacccccagcagcagtagtagtcgaacacggacacctgcctctgtcaacgctaca
ccagctaacatcaacatcgcagacctgacgcgagctgtcaacgctctcccgcggaacatg
acctctcagatgttcagtgccattgccgcggtgacagggcagggccagggccagaatgcc
aacaccacgcccgcccagtggggctccagccaatatggttacaccgggggcagcagcggg
gatgggggaggcaactcctcagcctatcacgtatttgcaacaccccagcagccgatggcg
acgcccatgatgacccccagctactcgtacaccacccccagccagcagaccatgggtacg
ccccagtacccctcctccacccccttgtcctcccacggacacacacagagcagccaaggg
cacgcccaccagggccacaacagcagcaacagtcaccatggacactcgtccaacacacct
ttctcctccacctcttccagaggacgcacgccgcagcagcctaagtcgagcggcagcacg
gcggtggactgggccaagatggcggagcagtggctccaggacaaggaggcggagaggaag
aagcagaagacccccaggatgaccccacggccttcccacagccccatgatcgagagcacc
ccaatgtccatcgctggagacgcaacaccccttctggacgagatggaccgatag
DBGET
integrated database retrieval system
