Salmo trutta (river trout): 115155171
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Entry
115155171 CDS
T08542
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115155171
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115155171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
115155171
NCBI-ProteinID:
XP_029557736
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All DBs
Position
2:complement(39066344..39080133)
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AA seq
902 aa
AA seq
DB search
MTVCCESCESPWSSERCSSHLFTRETGTRPGLCKRFRSTKGASKARRDQINSEIRNMRTL
LPIPQEDQDRLSYLHSMAVITAYIRKSFLYKGLSADQSCLSSSSSYPLYETFLPAVHGFI
LILSSQGRLVYVSENVSDYLGLSMVDVLQGDTFYDLVENQDVETVRSNLETDNTTSTERS
FVCRMHTSKAFRLEYGNCCSIMVRGRYQTLPQSPQSTPTSSPDRSQSGPPVERVFLALCT
PTVNHLGNSIFSSCSSSFTSLHRPDMSFSHLDESVVFYLGYSSEELIGQSWYSLLHPEDL
SLSAYTHKSLMQADEGRQMEMVLRLQHSDLSWSWIYTRAAKHSGNQEVSCSNYIISETEA
MYLRKKIHSDAFRASPPQPYCPSPTPQLTQSCCPTRDLKRQRAFSQSSSISETENRSKTS
KRQRAESNAVFYVTSCSSSSQASPVAAFSTPPYSPTSSHYSSSSNSSHSPTQQDDTSSDS
LLDVYSYTENLTPYYHCPEGGTEVGTGPSCLLSPSRSFQPGLEQSFHQGVFSQTDACSPQ
SCPSSPQYDCSACPADARLVPDCLSVSDLLESSADCPITIQDYSLSVQPQGGATSPYSLS
VQPQGGATSPYSLSVQPQGGATSPYSLSVQPQGGATSPFSLSVQPQGGATSPYSLSVQPH
GGATSPYSLSVQPQGGATSPYSLSVQPQGGATSPYQSHHIPQTVSPPIGGLLTPNPSLTS
NLSFLYSDRDKVEISILAQQISSLASSFDLFNTLSPIQTPPQPQPSSEPLPWAQLPGPST
VPLHIKPELVLDEGVFDSLLKDLSMVQGPGSLSPCYQPQDPSTLALSSLADPLPMEQSSL
SLSLPLQHPSSLSLSFPLDPFHLANLDPFSLRTSCHNQTSELHQLNLPHSLHQDGLVEES
MY
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgacggtttgttgtgagtcgtgtgaaagtccatggagcagtgagcgctgctcctctcat
ctcttcacccgggagacaggaacccgcccgggactctgcaagagattcaggtctactaag
ggagcgtctaaagccaggagggaccagatcaactctgagatcaggaacatgagaactctg
ctccccatccctcaggaggaccaggacagactgtcatacctccacagcatggcggttatc
acagcgtacatcaggaagagctttctgtataagggattatcagctgatcagagttgtctc
tcctcttcctcctcctatcctctgtacgagaccttcctcccagccgtgcatggtttcatt
ctgatcctctcctcccagggcaggctggtctacgtctccgagaacgtctctgattacctg
gggctctccatggttgatgttcttcagggagacaccttctatgacctggtggagaatcag
gatgtggagacggttagatctaacctggagacagacaacacaacgtcaactgagaggagt
tttgtgtgtcggatgcacacctccaaggccttcagactagagtatggtaactgctgttct
ataatggtccgaggacgctatcagaccctcccacaatcccctcagtccacccccacatcc
tccccagaccgtagccaatctggcccccctgtggagagggtgttcttggctctctgcaca
cccacagtgaaccacctgggcaacagcatcttctcctcctgctcctcctccttcaccagc
ctccacagaccagatatgagcttcagtcacctggacgaaagtgttgtgttttacttgggc
tactcatcggaggagctgattggtcaatcgtggtacagcctcctccaccctgaagacctc
tccttgagtgcctacacacataagagtctgatgcaggcagacgagggtaggcagatggag
atggttctgaggctccaacacagcgacctctcatggtcctggatctacactagagccgct
aagcattctgggaaccaggaagtgagctgctctaactacattatcagtgaaacagaagcc
atgtatctgaggaaaaagatccacagcgatgcttttagagcctctcctcctcagccctac
tgcccctctcccaccccccagctgacccagagctgttgccccaccagggacctaaagaga
cagagagcattcagccagtccagtagtatatctgaaactgagaacaggtctaagaccagc
aagagacagagagcagagtctaatgctgtgttctacgtgacatcatgtagctcctcctcc
caggcctcacctgtcgccgccttctccacacctccctatagccccacctcctcccactac
agctcctcctccaactcctcccactctccgacacagcaggacgacaccagctctgactct
ctgttggatgtgtatagctacacagagaacttaaccccctactaccattgccctgaggga
gggactgaggtagggactgggccttcctgcctcctgtccccctctaggtccttccagccc
ggcttggagcagtccttccaccagggtgtcttcagccagactgacgcatgctctcctcag
tcctgcccttcttctccccagtatgattgctcagcatgccctgctgatgcccggctggtc
cctgactgtctatctgtatcagacctgttagagagttcagcagactgccccatcaccatc
caagactacagcctctcagttcagccacaaggtggagccaccagtccatacagcctctca
gttcagccacaaggtggagccaccagtccatacagcctctcagttcagccacaaggtgga
gccaccagtccatacagcctctcagttcagccacaaggtggagccaccagtccattcagc
ctctcagttcagccacaaggtggagccaccagtccatacagcctctcagttcagccacat
ggtggtgccaccagtccatacagcctctcagttcagccacaaggtggtgccaccagtcca
tacagcctctcagttcagccacaaggtggtgccaccagtccataccagagccaccatata
cctcagactgtctctcctcctattggaggcctgctgacccctaacccctccctgacgtcc
aacctctccttcctctacagtgacagagacaaggtagagatcagtatcctagcccagcag
atctcctctctggcctccagcttcgacctgttcaacaccctgagccccatccagacccca
cctcagccccagcccagctcagaaccccttccctgggcacagctcccaggtccctccact
gtccccctccacatcaagccggagttggtcctggatgagggagtgtttgatagtctcctg
aaggatctgagcatggttcagggacctgggagtctgtctccctgctaccaacctcaggac
ccttcaacccttgctctgtcctctctcgccgaccctctacccatggagcagtcatccctc
tctctctccctccccctgcaacacccctcctccctctctctctccttccccctggaccca
ttccacctagctaacctggatcccttctctctgaggacaagctgtcataatcagacctct
gagttgcatcaactcaacctgccacacagtctccatcaagatgggcttgttgaagaatcc
atgtactga
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