Salmo trutta (river trout): 115155414
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Entry
115155414 CDS
T08542
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115155414
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115155414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
PH
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
115155414
NCBI-ProteinID:
XP_029557872
Ensembl:
ENSSTUG00000017918
LinkDB
All DBs
Position
20:2392399..2495077
Genome browser
AA seq
1759 aa
AA seq
DB search
MMEEQKSPVKEESSRERGLLHLWRGYCSSVTPERVLLSRPVLQAALGISHGILLAEGGLV
YSFGDLTWRQGLRVPPTYPLLESVLSGQCVSSVAAGSFHCGAVTQEGAVYMWGENSSGQC
GLSERGLVPDPSLVGMVDSETVPPQIIRILEVTCGEQHTLALSAQHEVWAWGSGCQLGLV
NSVFPVWRPQKVEHLAGRHVVQVACGGYHSLAVVRHFPGQDSQFTRLTATEKCDQCNQLL
FSVVDKEDRVIINDSHYCPLGIELADSKPGSCSRSRQASPARQASPARHASPSRQASLAQ
RHRASACPLSQAVSPDLGLDPDPIIGPEHLFCGDTDSSLREFSSKEQANQQDTGTSDTER
QGPGTLTETDSNSTLTQARRRKTTSSTAEKEPKEYPEGTSDRVLSPSEQNDNDITGNPIT
LANQTTGDSLTLANQTAGDSLTLANHSSGDLLTLVSHVPGQYLNCDLPDQDQPSTLTSRL
PPQPTDDTTVESSLSCSLPENYTGALVMKHTLALTGRFAAAASASPSTSSLCVPAAGLCE
ARSGPVMAYRKTNQEVRLCTEEDSFQGKKCSSLTDILLEEITERNRRHSLPPLLSHASPE
LPGRRTARSRPNVPRKEEVVESLPSLNTEVWSWGRGQEGQLGHGDQLPRLQPFCIESLNR
EEVVKVAAGTHHSLALTAQCQVFSWGSNRSGQLGHMNSPTTMPQKAKMSEGLRVFDLAAG
QSHSVFLADGDCSQPILFYSGQQMMETTPENHIPGTGSTESSPSITDTYTLRPVLLPFCM
KMGYISSVYGGGQSCLAQADLNVMGFISALHELAAADRKFYCRLRDVKKRVVRPLLKKES
VCTVLGTTSTLLFQSLASSYSRLCHLTGQHSVSLTAFLRTDRDVKGLVILKQANTFLDLY
QEYCGSVGNFLVMGGFQALMKPSVECFGKKLEVLRQLSESSEDKVPPFDLLVALFYSPIQ
HVREYGRLLLKLATCFDVSTVEYLRLQEGCSRYEALSLSLRRKRKEAETTNQFWRTYSGK
TTDVLRKPQRRLVYESSNKSLTLQNAGRFSVNWFILFNDALIHAQGTIPSKSFFSSHHVY
FLATLWVEPITDITASSNLYGIKVTTPEESFTLLASSAQEKAKWLRAINQAVEAVLTGEG
NGPGVPAVSRTAFYVFYKDLRLKDASYSGRWLSGKPHGKGTMKWPDGRKFTGTFKQGLED
GYGDCIMPNKLLNKSDLYRGHWRDGKMHGFGTYKYATGQVYEGSFHENIRQGHGMLSSGK
LIGSSSSVFVGQWLQDKKMGYGVLDDITRGEKYMGLWVDDQRQGSGVVVTQFGLYYEGTF
SNNKMMGTGLLVSDDDTAFEGEFSDDWTPNGQGTLSMSNGDFIEGQFNGEWSSGLKIMGT
YMKPNLSEPGKKISAWVLEVGRLSVSPEQKWKAVFSECWSRLGCEDPGKPEESMRAWDNI
AVTLTTGRRDSPELLSRSQSRVLEKLEVIPQHTGPITAGRYEVIRRYLTKACETPLHPLG
GLVETLVTVYRMTYIGVGSNRRLLRQAVEEIKSYLRRIFQLVRFLFPDLPDEGGVIHADH
KGSSETNQQGLVVSSSTLLLPVLLPRLYPPLFTLYALDKEREEEVYWDCVLRLNKQPDLG
LLAFLGVLQKFWPVSISVLGEKQQVLPSTKDACFASAVETLQQISTTFTPSDKLQVIQRT
FEELTQEVQALLEGNFLLSMDDLLPLFLYVVLRARMKNLAAEVSLIEDLMDPSLQHGELG
HMFTTLKACCFQIQQEKTT
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaacagaagagcccagtgaaggaggagagctccagagaacgaggcctgctc
cacttatggagaggctactgcagtagtgttaccccagaacgggtgcttctgtcccggcca
gtcctccaggctgcccttggcatcagccatggtatcctcctggctgaaggtgggctggtg
tacagcttcggcgacctgacgtggaggcagggcttgagggtcccacctacttaccctctc
cttgagtctgtcctctctggtcaatgtgtttcgtctgtagctgcaggctcattccactgc
ggcgccgtcacacaggaaggagctgtgtacatgtggggtgagaactcctcggggcagtgt
ggtctgtcagagagaggcctggtcccagatcctagcctcgtcggtatggtggattctgag
acggtccctccgcagatcatcaggatcctggaggtaacctgtggggagcagcatactctg
gctctgtctgcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtc
aacagtgtgttccctgtgtggagaccccagaaagtggagcacctggctgggaggcacgta
gttcaggtggcgtgtggaggataccacagtctggccgtggtacgacacttccctggacaa
gactctcagttcacccggctgacagctactgaaaagtgtgaccagtgcaaccagctgctc
ttctctgtggtggataaagaggaccgtgttattatcaacgacagccactattgcccacta
gggattgagttggctgatagcaaaccaggaagctgctcgagatccagacaggcttcccct
gccagacaggcctccccagccagacatgcctccccgtctagacaggcctctctagcccag
agacacagagcctcagcctgcccactctctcaggcagtcagccctgatctgggccttgac
ccagaccccattataggtccagaacacctattttgtggcgacacagacagctctctcaga
gagtttagctccaaagaacaagctaaccaacaggatactggtacctctgacactgaaaga
caaggccctgggactctgacagagacggacagcaactcgactctaacacaggcaaggagg
aggaaaacaacatcttcgaccgctgagaaggaaccgaaggaatacccagagggaacgtct
gatcgcgtcctgagcccgtctgaacagaacgacaatgacatcacagggaatccaatcacc
ttagccaatcagacaacaggggattcgctcaccttagccaatcagacagcaggggattcg
ctcaccttagccaatcatagctcaggagatctactcaccttggtaagtcatgtcccagga
cagtacctaaactgtgacctacctgatcaagaccagccttctaccttgacgtcacgtctt
cctccacaacctacagacgacaccaccgtggaatccagcctatcatgttctctaccggag
aactacacgggtgccttagtcatgaaacataccttagcgttaacgggccgttttgctgct
gctgcctcggcctcaccctccaccagcagcctctgtgtcccagccgcagggctgtgcgag
gctcggtctgggcctgtcatggcatacaggaagaccaaccaggaagtgcgtctctgtacg
gaggaggactcctttcaagggaagaaatgctccagtctgactgatatcctgctagaggag
atcacggagaggaatagacgacactcgctacctcctctcctctctcatgcatcccctgag
ctacccggcaggaggaccgctcgctccaggcccaatgtgcccaggaaggaggaagtagtg
gagtctctgccctccctgaacacagaggtgtggagctggggcagggggcaagagggacag
ctgggccacggagaccagctacccaggctccagccgttttgtatcgagagcctgaacaga
gaggaggtagtgaaggtagcggcaggaacacaccactccctggcccttactgcacagtgt
caggtgttttcctggggcagcaacagatccggccagttgggacacatgaacagccccact
accatgcctcaaaaggccaagatgtcagagggtctgcgtgtgtttgacctggcagcagga
cagagccacagtgtgttcctggctgatggtgactgctcccagcccatcctcttttacagc
ggtcaacagatgatggagaccacacctgagaaccacatacctgggacagggtcaactgag
agctctccctctataactgacacgtataccctcagacctgtcctactgcccttctgtatg
aaaatgggctacatcagcagtgtgtatggcggaggacagtcttgtctagcccaggctgac
ctcaacgtgatggggttcatctctgctctccacgagctggctgcagcagacaggaagttc
tactgcaggctcagagacgtcaagaagcgggtggtcaggcctctactgaagaaagagtct
gtgtgcacggtgttgggcacaacgtccaccctgctgttccagtccctggctagtagctac
agcaggctgtgtcacctgacaggacaacactccgtctcccttacagccttcctccgtact
gaccgggacgtcaagggactggttatcctgaaacaggctaacacattcctggacctgtat
caagagtactgtggttcagtgggtaatttcctggttatggggggattccaagccctcatg
aagccctctgtggagtgttttggtaagaagttggaggttttgcgtcagctgtcagagtcc
agtgaagacaaggttcctccgtttgacctgttggtggcgctgttctactctcctatacaa
cacgtccgcgagtacggcaggctgctgctcaaactggccacctgtttcgatgtgagtaca
gtggaatacctgaggctgcaggagggctgctccaggtatgaggcactgtctctcagcctg
aggaggaagaggaaggaggcagagacaactaaccagttctggaggacatattctgggaag
acgacggatgtccttcgtaagccccagcgcaggctggtgtatgagagtagcaacaagagc
ctgaccctccagaacgccgggaggttctctgttaactggtttatcctgttcaacgacgct
ctgattcatgcacagggtaccatcccctctaagagctttttctcatctcatcatgtctac
ttcctggccactctctgggtggaaccaatcactgacatcactgccagcagcaacctatat
ggaattaaggtgacaactccagaggagagctttactctgctagcatcctcagctcaggag
aaggctaagtggctaagggctattaaccaggctgtggaggcggtgttgactggagaaggg
aacggtcctggggtccccgctgtctctcgtaccgccttctacgtcttttacaaagacctc
cgtctgaaggatgcctcctactcaggccgctggctgtctggcaagccccacggcaaaggg
accatgaaatggccagatggcagaaagttcacggggacgtttaaacaaggactggaggac
ggctatggagactgtataatgccaaacaagctcctcaataaaagtgatctttaccggggc
cactggagagatgggaagatgcatggctttgggacgtacaagtatgctacaggtcaggtg
tatgagggatccttccatgagaacatccgtcagggccatgggatgctgagctctgggaag
ctgattggctcttcttccagtgtgttcgttggccagtggcttcaagacaagaagatggga
tatggagtccttgatgacatcactagaggagagaagtacatggggctgtgggttgatgac
cagcgccagggcagtggagtggtagtcactcagtttggtctttactatgaagggaccttc
agtaacaacaagatgatgggtactggtctgctagtatctgatgatgacacagcgtttgag
ggagagttctcagatgactggacccctaatggccagggtaccctgtccatgtctaacgga
gacttcatagagggtcagtttaatggagagtggagctcagggctgaagatcatgggaacc
tacatgaagcctaacctttctgaacctggcaagaagatatcagcctgggtgcttgaggtg
ggccgtctatccgtatccccggagcagaagtggaaggcagtgttctcagagtgttggagc
aggctgggttgtgaggacccaggaaagccagaggagagcatgagggcctgggacaatata
gctgttacactcactacaggacgcagagacagtccagagctgctgagcaggtctcagagt
agagtcctggagaagctggaggtgattcctcaacacacaggtccgattactgctgggagg
tatgaggtcatccgacgatacctcaccaaggcctgtgagactcccctccaccctctggga
gggttagtagagaccctagtgaccgtgtacaggatgacctatatcggggtaggatctaac
agaaggttgctacgacaggctgtggaagagatcaagtcctacctcagacggatcttccag
ctggtcaggtttctgtttcctgacctccctgatgagggaggtgttattcacgctgaccac
aaaggatcctcagagacaaaccagcaaggcttggtggtgagtagctccactctactacta
ccagtcctgctgcccaggctgtaccctcctctgttcaccctgtatgccctggacaaggag
agagaggaggaggtttactgggactgtgtcctgaggctcaacaaacagcctgacctgggc
ctgctggccttcctgggggtcctacagaagttctggcctgtctccatctctgtgttggga
gagaagcagcaggtccttcccagcaccaaagatgcttgctttgcttctgcagtggagact
ttacaacagatcagcaccaccttcaccccgtcagacaagctgcaggtgatccagcgtacc
tttgaggagctgacccaggaagtacaagccctgctagaggggaacttcctgttgtccatg
gatgacctcttacctctcttcctctacgtggtgcttagagcacggatgaagaacctggct
gctgaggtgagtttgatagaagatctaatggacccctctctgcagcacggagaactggga
cacatgttcaccacactcaaggcttgctgttttcagattcaacaggagaagacgacatag
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integrated database retrieval system