Salmo trutta (river trout): 115155431
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Entry
115155431 CDS
T08542
Name
(RefSeq) fibronectin-like
KO
K05717
fibronectin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
stru05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115155431
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115155431
09142 Cell motility
04820 Cytoskeleton in muscle cells
115155431
04810 Regulation of actin cytoskeleton
115155431
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115155431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115155431
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115155431
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115155431
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115155431
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
115155431
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
115155431
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115155431
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
115155431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
115155431
NCBI-ProteinID:
XP_029557903
Ensembl:
ENSSTUG00000020383
LinkDB
All DBs
Position
20:3754194..3829764
Genome browser
AA seq
2494 aa
AA seq
DB search
MNMSSSPIIRVLVVLCIGTAVNCMPNRKSRRQAHQGETKIPSVSSVSQDGCIDNGQMYNI
NDQWERSYLGTMLVCTCHGVAGIKCKTKPEAEETCYDKINARSYLVGETYERPKEGMIWD
CTCIGSGRGKISCTIANRCHEGGQSYKIGDTWKRPHDTESYMLECVCLGNGKGEWTCKPV
AERCYDNTAGTSYVVGETWEKPYQGWMIVDCTCLGEGSGRITCTSRNRCNDQDTLTSYRI
GDTWSKTDARGHMLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPAVYQPLPQP
GLEPHPGLAQEGACQTDAGVAYALGMRWIKTQGSKQMLCTCLGNGVSCEEWEGPAPVYGG
NSNGQPCVFPFTYMGKTHHSCTSEGRPDGQLWCCISSDCETEQKFSFCTKKNVMVTTRGG
NSNGALCQFPFLYNGRNYTDCTADGRRDGMKWCGTTTNYDGEQRFGFCPMAAHEEVCTTS
EGVMYRVGDQWDKRHDVLGHMMRCTCVGNGRGEWSCIAYSQLKDQCIVDGLTHEVNQTFT
KLHEEGYMMNCSCFGQGRGRWKCDAIDQCQEPETRVFYQIGQSWDKLIHSVMYKCYCYGN
GIGELSCEPQQSFPGGNRPVQVIISESGNQPNSHPIQWNAPSSAHITQYILKWRVKNTRT
PWREVNIPGHLNSYTIAGLKPGITYEGQLISVLRFGRREVTRFDFTTTYGSLATSEGETT
QPPPVVDISESVTEITSSSFVISWMSASDTVSGFRIEYELSEEGQERGQPMILDLPRTAT
SVNINELLPGRKYTVNVYEVAPTGEPNLILTTSQTTAPDAPSDHEVDEVGETSIIVSWEK
PLAPITGYRVIYTPSVEGSNNGAATELTLPDTATSVTLSDLRPGLLYNISIYAVEDSLES
EPVFVQVNTAGEPLPEEVPSPTDLQFFEVSDVKITITWTGPPTDVSGYRVTVAPVGPNGT
PQRELQLPVTHNAYAEVTHLTPGTPYRFSIFTIKGGEESQPLVAEQATKPDSPADVRFAN
VTEDSALIMWVPPRARITGYRLFLTLEGSNPKQLRLPARLSQYTLLNLRPDTEYTAILHS
EQDNTLSEGASRIFSTTQLMGNAPRFSTDVTDTSIIISWTPVPRVGYKLTVRPSQGGEAP
RDVTSNSGSIYISGLTPGVEYTYSVQPIVNGYEQGNPITRRIVTPLSPPTDLKLESHPDR
GELTVQWNEASTPDITGYRVTCTPTNGQRGNSLEEFVKAGETSCTLENLSPGVEYNVSVF
TVKDDMESVPVSDTVTQDVPQLTDLNFVDVTDTTIGLKWNPLNYTAVTGYRITVMAAGES
VPIFEDMVEATTGYYTVYGLEPGIGYDISVITVTESGESEPTTLTQQTAVPAPTNLGFPE
VGPDSMQVTWTAPVVPNPADISSFVIRYHPIDDEDDITESSVGRNADTVVLKNLISNTEY
LVSVVCVYEARESSPLVGTQKTTLDSPSGLRFSEVLTNSFTVHWQAPNAIITGYRIRYQM
TSGGRAKDERLPPSRNHFTLTGLTPETEYIVNIYAVSGQQDSKPLTGKQKTISDAPTDLE
VVSSSPTSVTVRWDAPSVTVRYYRITHGESGLSGGHSTPKEFTVPGSQSTATIQNLRPGT
DYTITVYAVTGRGDSPASSTPIYVTHKTDIDSPLEMKVTDVKDSTITVRWSPAQGPVQGY
RITGVPKNGQGPSFSETVAPDQTEMTFSGLQPTVEYILSVYALGQDGESPPLVETAVTAV
GRPTDLTFSNVDSTSMTISWDSPDGQVTSYRVLYASPEEGERELRPAPRGDDESATIHGL
RPGSEYTVKVIAMHDRTPSPPLVGVQATAIPAPTNLEFSQITSSSFTINWRTTSNARLTG
YRVVVNPKNKSGPTKEMNVAPDTTQVHVPGLMVATMYEVHVYALKNSLTSRPVQGEVTTL
DNISPPRRVRISDVKDSSITLTWRSKTETISGFLVEATPTSGGRTPIQRTIAPDSRTYTI
QGLQPGSTYKINIYTLNGNGRSAPFTLTATTAKPVVSPPTNIRFTSLTPSSISFTWEGSR
SAGVTGYYITYEEAGGIPRELTPRPTASRSQAIITGLKPGTEYVVKIVTLQNALRSTPLV
GKARTQLASQLPVSHRPSLDILDVPEDENHVQLVGTNGQDTLGQQGQHIYTEYQNLGPNP
NGRDNQGPAIHHREPLVYIPVPGPDGQRVPLVRVSEGPLSGLPFGFPENETGFGVPQEAQ
THTTISWQGVPQSSEYMVSCSPITNLEEKMFQMRLPGTSTSATLIGLTSGASYNVIVEAM
RGQGREKVLEEIVTAGNAVPGDHLPSNRDVCYDTFTATYHDVGAEWERMSETGFKLWCRC
LGLGSGHFRCDSSKWCHDSGNNYRIGEKWDRHAENGHMMSCTCLGNGKGEFKCEPHESTC
YDEGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGTQTEVDVDLLQPQIHQDA
FDRYRENALKKLNIQCPIECLRPELLADVQQPSE
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtccagtagcccgattatcagggttctggtggtgctttgcattgggaccgcg
gtgaactgtatgccgaacaggaaaagcaggcgtcaggctcatcagggagaaaccaaaata
ccttcggtatcatccgtctctcaagacggctgcattgataatggccagatgtataacatt
aacgaccaatgggagcgttcctatctgggcactatgttggtctgcacttgtcacggagtt
gcaggaattaagtgtaaaacgaaacctgaagctgaagagacctgctatgacaagatcaac
gccaggtcttatctggttggtgagacctacgagagacccaaagagggcatgatctgggac
tgtacgtgcatcggctctggccgggggaaaatcagctgcaccatcgccaaccgctgtcat
gaggggggtcagtcctataagattggggacacgtggaagagacctcatgacactgagagc
tatatgctagagtgtgtctgtctgggcaacggcaagggagagtggacctgcaaacctgtt
gcggagcgttgctatgacaacacggcggggacatcctacgtggtgggtgaaacctgggag
aaaccgtaccagggctggatgattgtagactgcacctgtctaggagaggggagtggcagg
attacctgtacctctagaaatcggtgtaacgaccaggacacactgacgtcctatcgtatc
ggagacacctggagcaagacggacgcccgaggtcacatgctgcagtgtctgtgtacgggg
aacgggcgtggcgaatggaagtgtgagagacacgcctccctccacacgaccggcctgggc
actggttcccgtgtgatcactaacatccagccagctgtgtatcagcccctcccccagccc
ggcctggagcctcaccccggtctagcccaggaaggggcctgccagacggatgcgggggtg
gcttacgccctggggatgagatggatcaagacccaggggagtaaacagatgctgtgtacc
tgcctgggcaacggggtcagctgtgaggagtgggagggcccagccccagtgtacggtggg
aactccaatggtcagccctgtgtgttccccttcacctatatgggaaagacccaccattcc
tgtacctcagagggacgacccgacggccagctgtggtgctgtatttcttctgactgcgag
acggaacagaaattctccttctgtaccaagaagaatgtgatggtgacaaccagaggagga
aactctaacggagctctgtgtcagttccctttcctctacaatgggagaaattacaccgac
tgtaccgccgacgggcgcagggacggcatgaaatggtgtggaaccaccaccaactacgac
ggtgaacagaggtttggcttctgccccatggctgctcacgaggaggtgtgtacgaccagc
gagggcgtgatgtaccgcgtgggagaccagtgggacaaacgccacgacgtcctgggacac
atgatgcgctgtacctgcgttggaaacggccgtggagagtggagttgtatcgcttactcc
cagctcaaagatcagtgtattgtggacgggttgacccatgaggtgaatcagaccttcact
aagcttcatgaagagggctacatgatgaactgtagctgtttcggacagggccgtgggcgc
tggaagtgtgacgccattgaccagtgccaggagccagagaccagggtgttctatcagatc
ggccaatcatgggacaagctgatccacagcgtcatgtacaagtgttactgctatggcaac
ggtatcggcgagctcagctgtgagccccaacagtctttcccaggtggtaaccgtccagtc
caggtgatcatctcagagtctggtaaccagcccaactcccaccctatccagtggaacgcc
ccgtcctccgcacacatcacacagtacatactcaagtggagagtgaaaaacacccgtacc
ccttggcgagaggtgaatatcccgggtcacctcaactcctacaccatcgctggcctgaag
ccaggcatcacctacgagggtcagctgatcagtgtgctacgcttcggacgtcgcgaggtc
acacgcttcgacttcactaccacatacggttccttggcgacctccgagggagagaccacc
cagcctcctccggtggtggacatcagtgagtctgttacagagatcacatccagcagcttc
gtcatctcctggatgtctgcctctgacaccgtgtctggcttcaggatcgagtacgagctc
agtgaggagggacaagagagaggacagcccatgattctcgacctcccccgcaccgctacc
tctgtgaacatcaatgagctgcttcctggaaggaaatacactgtgaatgtgtacgaggtt
gcacctactggagagcccaacctcatcctcacaacctctcagaccactgctcctgacgct
ccctctgaccacgaggtggacgaggtgggagaaacctctatcatagtcagctgggagaaa
cccctggctcctatcacaggttatcgtgtgatctacaccccgtctgtagaggggagcaat
aacggagctgcaacggagctcaccctgccggacaccgcgacctctgtgactttgagtgac
cttcgaccaggcctgctgtacaacatcagtatctacgcagtagaggatagtctggagagt
gagcctgtcttcgtacaggtcaacacagccggagaacccttaccagaggaagtcccgtct
cctacagacctgcagttcttcgaggtgtctgacgtgaagatcaccatcacctggacgggg
ccccctactgacgtgtctgggtacagagtgactgtggcccccgtcggtcccaacgggacc
cctcagagagagctccagctccccgtcacacacaacgcctatgcagaggtcacccacctg
acccccgggactccgtaccgcttcagcatcttcaccatcaagggaggagaggagagccag
ccactggttgcagagcaggctaccaagcccgattctcctgctgatgtccgtttcgccaac
gtaaccgaggacagtgctctgatcatgtgggtgcccccccgggcccgcatcacgggatac
cgtctgttcctgaccctggagggatccaaccctaaacagctacgtttgcccgcccgcctg
tctcagtacaccttgctcaacctccgcccagacacggagtacacggccattctgcactct
gaacaggacaatacgctcagtgagggtgcctccaggatcttctccaccactcagctaatg
gggaacgcccctcgcttcagtactgatgtcacagatacctccatcatcatctcctggaca
cccgtaccccgagtgggatacaagttgacggtgaggcccagtcagggaggcgaagccccc
agagatgtaacctctaactcgggtagcatttatatctcgggcctgacccctggggttgag
tacacctacagcgttcagccaatcgtcaacggatatgagcagggcaacccaatcacacgc
cgcatagtcacacctctgtctcctcctactgacctcaaactggagtcccaccctgacaga
ggagagctgaccgtccagtggaacgaagccagcaccccagacatcaccggctacagagtg
acatgcacgccaaccaacgggcagcgaggaaacagcctggaggagtttgtgaaggcgggg
gagacctcgtgcacgctggagaacctcagccctggcgtggagtacaacgtcagcgtcttc
accgttaaagacgacatggagagcgttcctgtctccgacaccgttactcaagacgtgccc
cagctaacagacctcaacttcgtcgacgtcaccgacacgactatcggcctgaagtggaac
ccactaaactatacggcggtcaccggctaccgtatcacggttatggcagccggggagagc
gtgccaatattcgaggacatggtggaggccaccaccgggtactacaccgtatacggactg
gagcccggcatcggttatgacatttcagtcatcaccgtgacagagagtggagagagcgaa
ccgaccacactcacgcagcaaactgccgttcctgctcctactaacctgggtttccctgag
gtgggtcctgacagtatgcaggtgacctggaccgctcctgtggttcctaaccccgctgac
atcagcagcttcgttattcgctaccaccccatcgatgacgaggatgacatcacagaaagc
agcgtcggaaggaacgccgacaccgtggttcttaagaatctgatttccaacacagagtac
ctggtcagtgtggtgtgtgtttatgaagcgagggagagctcacctctggtcggcacccag
aaaacaactctggactcccccagcggtctgcggttctcagaagttctgaccaactccttc
acggtgcactggcaggcccccaacgccatcatcactggctaccggattcgttaccagatg
accagcggcgggcgggccaaggacgagaggctaccgccatccaggaaccacttcaccctg
accgggctgaccccggagacagaatacatcgtcaacatctatgctgtcagcggccagcag
gacagcaagccgctcaccggcaaacagaaaaccatctctgacgctcctactgacctggag
gtagtgtcctcctcccccaccagcgtcacagtgcgctgggacgccccctctgttaccgtg
aggtactacaggatcactcatggagagtcaggtctgtccggtggccacagcacccctaaa
gagttcactgtgcctggttcccagtctactgccaccatccagaacctgaggcctggtact
gactacaccatcacggtctacgctgtgaccggcagaggggacagcccagcctccagcaca
cccatttatgtcacccacaagacagatattgactctcctttggagatgaaggtgaccgac
gttaaggacagcaccatcaccgtgaggtggtccccagcccaggggcccgtccaggggtac
aggatcactggggtccccaagaacggacagggtccctccttctctgagaccgttgctcca
gatcagactgagatgacgttctctggcctgcagcccacggtagagtacatcctcagcgtg
tatgctctgggacaggacggagagagccctcccctggttgagactgctgtcactgccgtg
ggtcgccccacagacctgaccttctctaacgttgactccacctccatgaccatttcctgg
gactcgcccgacggccaggtgacgtcataccgcgtcctgtacgccagccccgaagagggc
gagagggagctgcgccccgcaccccgcggagacgatgaatcggcaacgatccacggcctg
cgacccggaagtgaatacactgtgaaggtcatcgccatgcacgaccgtacacctagtcct
ccactggtgggtgttcaggccacagccatccctgcccccaccaaccttgaattctcccag
atcacctcctcctccttcaccatcaactggcgcaccacgtccaatgcccgtctgaccggg
taccgggtggtcgtcaaccccaagaacaagagcggtcccaccaaggagatgaatgtcgct
cctgacaccacacaggtccacgtgccgggactcatggttgccactatgtatgaggtgcac
gtttacgccctgaagaactctctgacgagccgcccagttcaaggagaggtcacaacactg
gacaacatcagtcctccgcgtcgcgtgcgtatctctgacgtaaaggactcctccatcacc
ctgacctggagatccaagaccgagaccatctctggcttcctggttgaggctacgcccacc
agtggaggccgcacccccatccagaggaccatcgcccctgattcccggacctacaccatc
caaggtcttcagcctggctctacctacaagatcaacatatacactctgaacggcaacggt
cgcagtgctcccttcaccctcactgccaccacagctaagcctgtggtgtctccccccacc
aacatccggttcacctccctgacccctagcagcatctcctttacctgggaggggtcccgt
agtgccggggtcaccgggtattacatcacctacgaggaggcggggggcatcccccgggaa
ctcaccccacgacccaccgcttcccgcagccaagccatcatcactggtctgaaaccagga
actgaatacgtcgtcaagatcgtcaccctgcagaatgctctgagaagcactcctctagtg
ggcaaggctagaactcaactggcatcccagctccctgtgtcccaccggcccagcctcgac
atcttggatgtacccgaggacgagaaccacgtccagctggtggggactaacggccaggac
acgctgggccagcagggccagcacatctacacagagtaccagaacctgggccccaacccc
aacggcagggacaaccagggcccagctatccaccaccgtgaacccctggtctacatcccc
gtcccaggccccgatggccagagagtgcccctggtccgggtgagcgagggtccgttatcg
ggtcttccgtttgggttccctgagaatgagaccgggtttggggtgccgcaggaggcccag
acacacacaaccatctcatggcagggtgttcctcagagctcagagtacatggtatcctgt
agcccaatcaccaacctcgaagagaagatgttccagatgcgattaccaggcacttctacc
agtgccactctgatcgggttgacgtcaggagcctcctataacgtcattgtggaggccatg
agagggcagggcagggagaaggtcctggaggagatagtcaccgctggcaacgctgttcca
ggagaccacctcccctccaacagagacgtgtgctatgacacgttcacagccacctaccat
gatgtgggtgcagagtgggagcgtatgtcagagacaggctttaagctgtggtgcaggtgt
ctggggctgggcagtggccatttcagatgtgattcatccaagtggtgtcatgacagcggg
aacaactaccgcataggagagaagtgggatcgccacgctgagaacggtcacatgatgagc
tgtacctgtttgggaaacgggaagggagagttcaagtgcgagccacacgagtcgacgtgt
tatgacgaggggaagatgtaccaggtgggaaaccagtggcagaaggaatacctgggagct
atctgtacctgcacctgttacggaggacagcagggctggcgctgtgagaactgcagaaga
ccaggaactcagactgaggtagatgtggatctgctacagcctcaaatacaccaagacgca
ttcgaccgctacagggagaacgccctgaagaaactgaacatccagtgccctatagagtgt
ctgagaccagagctcctagcagacgtacagcaaccctccgagtaa
DBGET
integrated database retrieval system
