Salmo trutta (river trout): 115155504
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Entry
115155504 CDS
T08542
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115155504
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115155504
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
115155504
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115155504
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
115155504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
MIT
AAA_16
Mg_chelatase
IstB_IS21
AAA_14
NPHP3_N
nSTAND3
AAA_2
DUF815
AAA_24
Motif
Other DBs
NCBI-GeneID:
115155504
NCBI-ProteinID:
XP_029558032
LinkDB
All DBs
Position
2:complement(41947790..41968859)
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AA seq
482 aa
AA seq
DB search
MSAKVRAGDSKDNGEIIKNYHKRAFEYISVALKIDEDDKGVKEEAVQWYQKGIAELQRGI
AIEVTGQGEHCDRSKRLQTKMINNLTMAKDRLALLEGASASKTRDSSQSPPGHLPTPPVR
PSGPKNKPGPGPGGSMSSHSKPASTGSSRTNNIKVVPRAAGRGQNGRPAASKEPQKRDMK
NFKNVDSKLASFILNEIVDGGSSVSFEDIAGQELAKQALQEIVILPALRPELFTGLRSPA
RGLLLFGPPGNGKTMLAKAVAMESHATFFNISASSLTSKWVGEGEKLVRALFAVARELQP
AIIFIDEIDSLLCERREGEHDASRRLKTEFLIQFDGVQSDGAERVLVMGATNRPQELDEA
VLRRFAKRVHVALPTEETRFKLLKNLLGKHGHPLNQKELAHLAKMTGGYSGSDLTSLAKD
AALGPIRELGPEQVKNMAASDMRNIRCKDFEDSLKRIKPSVSPTTLDLYVRWNTDYGDTT
AF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaagttagagcgggggacagcaaagacaacggagaaattattaaaaactac
cataaacgagcatttgaatacatatccgtggcactaaagatcgatgaagatgacaaaggt
gtcaaggaggaggcagtccagtggtatcagaaaggcattgcagagcttcaaagggggatt
gctattgaagtcacaggacaaggagaacattgtgatcgttcaaagaggcttcaaactaag
atgatcaacaatctcaccatggcaaaggaccgactcgctcttctagaaggtgcatcggcg
tctaaaacgagagacagctctcagagtccaccaggccatctccctacccctccagtgagg
ccttctggtccaaagaacaagccaggaccaggtccaggtggttctatgtccagtcacagc
aagccagcaagcactggctcaagcaggaccaacaatatcaaggttgtccctcgggctgca
ggaagaggacagaatggtagaccagcagcatcaaaggaaccacaaaagagggatatgaag
aactttaagaatgtggacagcaagttggccagcttcatactgaatgaaatcgtagacggt
gggtcatcagtgagctttgaagacatagcgggccaggagctggctaaacaagctcttcag
gagatagtcatcctgcctgcactcagacctgagctgttcactggtctcagatccccggca
cgaggtctgctcctcttcggccccccaggcaatggaaagaccatgctggccaaggcagta
gcaatggaatcccacgccaccttctttaacatcagtgcttccagtctgacttctaaatgg
gtgggagagggagagaagctggtcagagctctgtttgctgttgccagagaactacagcct
gccatcatcttcattgatgagatcgacagcctgctctgtgagaggagggaaggagaacac
gatgccagccgccggttaaaaactgagtttctcatacagtttgacggggtgcagtcagat
ggggcagagagggttctggtgatgggagctacaaacagaccacaggagctggacgaagct
gtgctcaggcgatttgccaaaagggttcatgtagccttaccaacagaggagacgcgcttc
aagttgctgaagaatctattgggaaagcatggacacccactcaaccagaaggaattagcc
catcttgcgaaaatgacggggggctattcaggaagtgatcttacgtcgttggctaaggat
gctgctcttggaccaatcagggaacttggaccagagcaagtgaaaaacatggctgctagt
gatatgcgtaacatccgctgcaaggactttgaggattctctgaagcgaattaaacccagt
gtcagtcccacaaccctggacctctatgtacgatggaacactgactatggagacacgacg
gccttctag
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