Salmo trutta (river trout): 115155619
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Entry
115155619 CDS
T08542
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115155619
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115155619
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115155619
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115155619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_DAAF5
ParcG
MMS19_C
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
115155619
NCBI-ProteinID:
XP_029558262
Ensembl:
ENSSTUG00000046697
LinkDB
All DBs
Position
20:15649444..15787645
Genome browser
AA seq
1643 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYILDKDRSQDLEQDQTGLDRMVDSIATTWVN
CSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLPSLIDRLGDSKDQVRDQDQILLLKIME
QAATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFEDEDSVDGGRSCSSASSSKAPPSGRRTVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNREMEDNLSKVREVLSDDKNDWEHRVIALKKVRSLLLAGALEYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLMGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAILTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSVIGGGMTRGKMVSSRVNSNPCGSLQRSRS
DIDVNAAASAKSCLVTVPSASPFSSAAALPPGSYASLDGTPGKMNTGRVRTRRTSAGSAV
GASATVTDSRGRSRAKMVSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPATSSTPADKRSKVPRSQGCSRDSSPSRLGLARSRIPRPSMSQGCSRDTSRESSR
DTSPARGFKPLASRRTSRSTSALSTADPHGQSDQFGLIHQDRISASVNAMRVLNTGTEVE
AAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASSACSERSYGSRNGGIPHYLRQ
TEDVAEVLNHCASSNWSERKEGLLGLQNLLKNQRILSRVELKRLCEIFSRMFADPHSKRV
FSMFLETLLDFILVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFD
HQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTE
PKSSDVRKTLHNWVVEELSGRSSTAALLSQQAGEGQLEERCKQAAQVVLISLFELNTPEF
TMLLGALPKTFQDGATKLLQNHLKNSSNTSSVSSPSNTIGRTTSRHPPSRTSPLTSPTNC
SHGGLSPSRLWGGCWSGDGLPKHPPPPHPPPPHSTPAGPALRVLRRAYSPSMLEYDTENM
NSDEIYSSLRGVTEAIQSFSYRSQEDLNELRGKRDDAAGREGVVPSPGSDARLGQDVVEG
GRTALDNKTSLLNTPSPRSFSGPRAREFAPYGYGDTITSSYDKSALKEAVFDDDVEQFRD
CRRQDSSGENKMVLSKGFTPGSQDHSDLVADLLKELSNHNERVEERKGALVELLKITRED
SLAVWDEHFKTILLLLLETLGDKDYTIRALALRVLKEILRNQPARFKNYAELTIMKTLEA
HKDSHKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERITK
ESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKSHLQLLTGSKMKLLN
LYIKRAQTTNSNSSSSSDVSSHS
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtactgtctggcccaggtggtgcagaaagacctggggaggaag
gtgcaggtgggacaggagctcatagattacatcctggataaggacaggtcccaggatctg
gagcaagaccagacaggtctggacaggatggtggacagcatcgctaccacctgggtcaac
tgttccaacttcaaggtggctttgcttggaatagaccttttatctgccctagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactgcccagtctgatagatcgtctg
ggggattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
caggctgccaccccacagtacgtctgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaacgctcaacatgtacggagcc
caaggcttaaccctcagtaaaatagtccctcacatatgtaatctacttggagatcccacc
agtcaggtgagagacggagctatgggctgcctggtggagatctacagacatgtgggggaa
agggtgaggatggacctcagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agtagatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgaggatgaggactctgtggatgggggccggtcctgctcctctgcatcgtcctcc
aaggcgccccccagtgggcggaggactgtagctgcagcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggagcagtagatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagagatg
gaggacaacctctccaaggtccgggaggtgctgtctgatgacaaaaacgactgggagcac
cgagtcatcgctctgaagaaggtgcgttctctgctcctggctggagcgctggagtatgat
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcggctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgctaatgggc
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
agacggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctattctgacggagaccatcaagaaagggatccatgatgccgactca
gaggccaggtccgtggccagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatcttttccaggccctggagtcgacctatcagaaggctctccagtctcacctg
aaaagttctgacagtgtcgtgtccctcccccaatcagaccgctcatcctcctcctctcag
gagagcctcaaccggcccctgtctgtcaagagtgtcataggaggcggcatgacaaggggg
aagatggtgagttccagggtgaactctaacccctgcggttctctccagcgttcccgtagt
gacattgatgtgaacgctgcggccagcgccaaatcctgtctggtcaccgtgccctccgct
tctcccttcagctcagccgctgctctgcccccaggctcctacgcctctctagatggcaca
cctggtaaaatgaatactggtcgtgtgcgtacgaggaggacaagcgctggcagtgccgtc
ggagccagcgctactgtgactgacagcagggggcgcagccgagccaaaatggtatcccag
tcccagcgatccagatctgctaaccccactggcggtggtaaggcccggacttcatccaat
cagactggcagtcgctccagttcccctggaaagcttctgggccactcgtctgggtacggg
aggatcagcaggccccccgcaacctccagcacccctgcagacaagaggagcaaagtcccc
cgcagccagggctgcagtagagattcctctcccagccgactgggactagcgaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggacacctctagggaaagcagccga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacttcccgctctacc
agcgccctatccacggctgacccccacggccagtcagatcagtttggtttgattcaccag
gaccgtatctctgcctcagtaaatgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgatgcactgctattaggagactccagaaataagaggaagcctatgagg
cggcggtatgagtctccgggtatctattctgacgacgatgctaacagcgatgcgtccagc
gcatgctcggagcgctcgtacgggtccaggaacggaggtatccctcactacctgcgtcaa
acggaggatgtggcggaggtgctaaaccactgtgccagctccaactggtcagagaggaag
gaggggctgctgggtctgcagaacctactcaagaaccaaagaatactcagccgagtggag
ctgaagagactatgtgagatcttcagcaggatgtttgcagatccacacagcaagagagtg
tttagtatgtttctggagactctgttggactttatcttggtgcacagagaagacctgcag
gactggctgttcgtcctgctcacccagctactgaagaagatgggagctgacctgctgggg
tctgtccaggccaaggtccagaaggctctggacatcaccagggagtcttttccgtttgat
caccagttcaacatcctgatgaggttcattgttgaccagacacagacacccaacctcaag
gtgaaggtggccattctgaagtacatagaatcactggcaagacagatggatcctacagac
tttgtcaactccagtgaaacccgactggctgtatctcgcatcattacctggaccacagag
cccaagagctccgacgtcaggaagacccttcataactgggtggtggaggagctatcaggc
aggtccagtactgcagccttactgtcccagcaggccggggaggggcaactggaagagagg
tgtaagcaggcggcccaggttgtgctgatctctctgtttgagctgaacaccccagagttc
accatgctgctgggagccttgcccaagaccttccaggacggggccaccaagctgctccag
aaccacctgaagaactccagcaataccagcagcgtgagttctcccagcaacactattggg
cggaccacaagccggcaccccccaagccggaccagccctctcacttccccgaccaactgc
tcccatggggggctatctcccagtcggttgtggggtgggtgttggagtggcgatgggcta
cctaagcacccccctccccctcatcctcctccgcctcactccacccccgcaggccccgcc
ctcagggtcctccgcagagcgtactctcccagtatgttggagtatgacacagagaacatg
aactctgatgagatctacagctccctgcgaggggtcacagaggccatccagagcttcagc
taccgcagccaggaggacctcaacgagttgagagggaagagggacgatgctgcgggacgg
gaaggtgtggtgccctctccaggctctgatgcccgtctggggcaggatgtggtggagggt
gggcgtacggccctggataacaagacctcccttctcaacaccccgtccccacgctccttc
tctgggccgcgagccagggagttcgccccctacggatacggagacaccatcacctcatcc
tacgacaagagcgccctgaaggaggccgtgtttgatgacgacgtggagcagtttagagac
tgtcgtcggcaggacagcagtggtgaaaacaagatggtgctgtctaagggctttactcca
ggttcccaggaccactcggacctggttgcagacctgctgaaggaactgtctaatcacaat
gagcgcgtggaggagcgtaaaggggcgttggtggagctcctgaagatcacccgggaggac
agcctggccgtgtgggacgaacacttcaagaccatcctcctactgctcctggagacactg
ggggataaagattacactatccgggccctggcactgagggtactgaaggagatactgcgg
aaccagccggcccgcttcaagaactacgctgaactcaccatcatgaagaccctagaggca
cacaaagactcccacaaggaggttgtaagagcagcggaggagtctgcctccaccctggcc
ggctccatccacccagagcagtgtatcaaggtgctgtgtcccatcgtccagacggctgac
taccccatcaacctggctgcaatcaaaatgcagaccaaagtgatagaacgcatcaccaaa
gagtccctgcaccagctgttgcctgacatcataccaggactactacagggctatgacaac
acagagagtagtgttcgcaaggccagcgtgttctgtctggtggccatctactccgtgatt
ggagaagagctcaaatcacacctgcagctactcacgggcagcaagatgaagctgctgaac
ttgtacatcaagagggcccagacaaccaacagcaacagcagcagttcctcggatgtgtct
tcacacagctag
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integrated database retrieval system
