Salmo trutta (river trout): 115155660
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Entry
115155660 CDS
T08542
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115155660
04514 Cell adhesion molecules
115155660
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115155660
09142 Cell motility
04820 Cytoskeleton in muscle cells
115155660
04810 Regulation of actin cytoskeleton
115155660
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115155660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115155660
04515 Cell adhesion molecules [BR:
stru04515
]
115155660
04090 CD molecules [BR:
stru04090
]
115155660
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115155660
Exosomal proteins of other cancer cells
115155660
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115155660
CD molecules [BR:
stru04090
]
Proteins
115155660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
115155660
NCBI-ProteinID:
XP_029558371
Ensembl:
ENSSTUG00000050828
LinkDB
All DBs
Position
20:20653988..20685957
Genome browser
AA seq
1019 aa
AA seq
DB search
MERKKPVNVYCCWSFLLAWCCSLTDCYNLDVDHPVSFTGPNGSSFGYSVLLHKNKQHTWL
LVGAPVANSTFDPSLIKPGAIYKCNISGNKECQQISTGVDSCGKTCVSESDNQWLGVSLS
RQPSDGHVLACGHRWKNVFYSRKDNQNKLPHGVCYRYEADLKQSQPLIPCYKDHQRKFGE
DYGSCQAGISNFLNEDLIIMGAPGTSYWTGSVLVYNTSSMVLSAYVDDDSTVLYGSYLGY
SVGAGHFLHPDSTEIVGGAPQHRQTGKAYLFRAEENMLKIISEVKGSKLGSYFGASVCAV
DLNGDGLSDLLVGAPMYSTMREEGRVHVYINQGAANMKEAEFQLAGSKSYAARFGETITD
LGDIDDDGFPDVAVGAPQEEELRGAIYIYNGRKTGISQTYSQRITGSLLGNELKMFGQSV
SGGIDVDGNGYQDIAVGAFLSDSAVVLRTRPVVVVEASMPLPASVNRSVALCSDNGLPAV
CINVTVCFRVRARRYNGLIELQYNLTADTHHKESFPSRFHFHGNGTSNVTTGQVKARHDQ
LTCVTHQAFMRKDVRDIFTPIHFEATYALRQHTVRNWGSRIFPALKPILQQRGGHSNLVA
NKTEFARYCSLANCSTNLQVSAYLVLPQKHNNIQYFALGNGKTIMLNTTLVNAGDDAFLP
RLRLRFPSNLHYIKVLDAEEKYVSCDISEENKTIVGMDCSVGNLYFSSGAKVNISFLLDV
NQSSSAGDISISINTSGDNYENEDLLHDNSATLMLPLRYGVDVSVHGFVTPTSFVFGDQE
PTPVDCYTETFNYTYKVVNIGPSKSLNTEVEIDIPKILSPYPYRLLHIADFQTSLGECSI
KNGSITVEDDCEVPRSSLIKELVFFFSKTSKRKMFCAHGDDLCLTLVCRLGDMDIGKEAT
IQMEVKLNPTVLQLTPGRHGVMLIESTGIITSPREDPHTILLQQIPIAQVVLEAHFNQKP
QAAVEAFIIVGSLLVGLLILALLIFALWKAGFFKRQFKKEIRRDSWDYVPKNEKTESIS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaagaagccggtgaatgtttattgctgttggagctttcttctcgcttggtgc
tgtagtctcactgactgttacaatttggatgtagaccatccggttagtttcactggccca
aatggatcttcatttggatattctgtgttgttacataagaacaagcaacacacatggtta
ttagtcggagccccagtcgcgaattcaacattcgatccatcccttataaaaccaggagca
atttataagtgcaacatctcaggcaataaagaatgtcaacaaatatcaacgggtgtggac
agttgtgggaagacttgtgtctctgagagtgacaaccagtggctcggagtcagcctgtct
agacagcctagtgatggccatgtattggcatgtgggcatcgttggaagaacgtgttctat
tccaggaaagacaaccagaacaagctgcctcatggtgtctgctacagatacgaagctgac
ctcaaacagtctcaaccacttatcccatgctataaagatcatcaacggaagtttggtgaa
gactatggatcatgccaagcaggaatatccaactttctgaatgaggacttgataataatg
ggagcccctgggacatcgtactggactgggtctgttctggtctacaacacctccagtatg
gtcctgtctgcctatgtggatgacgacagcactgtcctctatggcagttatctgggctac
tcagttggcgccggccacttccttcaccctgactccacagagatcgttggaggtgcaccc
cagcacaggcagactggtaaagcctacctattcagagctgaagaaaacatgctgaagatc
atcagtgaagtcaagggaagcaagctgggctcatattttggtgccagtgtgtgtgccgtg
gacctgaatggagatggcctgtctgatctactggtaggagctcccatgtacagcaccatg
agagaggagggacgagtccatgtctacatcaaccaaggagctgctaatatgaaggaagca
gagtttcagttggctggaagcaaatcgtatgctgcaagatttggggagaccataaccgat
ctgggagatattgatgacgatggctttcctgatgtggcggtgggtgctccacaggaggaa
gagctgcgtggggctatatatatctacaatgggaggaagacagggatctctcagacttac
tctcaaaggatcaccgggtctcttctgggtaatgagttaaagatgttcggccagtctgtt
tccggaggcatcgatgttgacggaaacggttaccaagacattgcggtaggggcctttctc
tcggactccgctgtggttctgaggactcgtccggtggtagtggttgaggcctccatgccc
ctgcctgcaagtgtaaaccgctctgtagctctgtgttctgacaacggtcttcctgctgtc
tgcatcaacgtgacagtctgcttcagggtccgcgctcgacgctacaacggactcatagaa
ctgcagtataacctgacagccgacacgcaccacaaggagtctttcccctcccgcttccat
ttccacggcaacgggacgtccaacgttacgacagggcaagtcaaggccagacatgaccag
ctgacctgcgtcacccaccaggccttcatgaggaaagatgtccgggatatcttcacgccc
atccattttgaggcgacgtacgccctcagacagcacactgtccgtaactggggatccaga
attttcccagccctgaaacccatcctgcagcagagaggggggcacagcaacctggtagcc
aataagactgagtttgctcggtactgttcattggccaactgttcaaccaatctgcaggtc
tctgcttacctggtcttaccacagaaacacaacaacatacagtactttgcattgggtaat
gggaagaccatcatgttgaacacaaccctggtgaacgctggagatgatgccttccttccc
aggctccggttacgcttcccctccaacctgcactacatcaaagtgcttgatgcagaggag
aagtatgtgagctgtgacatttcagaggagaacaagacaatagtaggaatggactgtagt
gttgggaacctgtacttcagctctggagccaaggtgaacatcagctttctgttggatgta
aaccagagtagcagtgctggtgacattagcatatccatcaacactagtggagacaattat
gaaaatgaggatcttctgcatgacaactcagccactctgatgttaccgttgagatatggc
gtggatgtaagcgtccatgggtttgtgactccaacatcctttgtatttggtgatcaggaa
cctactccagttgattgctacacagagacattcaactacacttacaaggttgtcaatatc
ggtccaagcaaatctctcaacacggaagttgagattgatattcccaaaatactatcacca
tatccatacagattactccacattgcagattttcagacctctcttggagaatgctccatt
aaaaatggctccatcacagtagaagatgattgtgaggtgccacggtcgtctttaatcaag
gaactggtcttcttcttctccaaaaccagcaaacgcaaaatgttctgtgctcacggagac
gacctgtgcctgactctggtgtgtagactaggagacatggacattgggaaagaagccacc
attcagatggaagtgaagctcaaccccaccgttctacagctcacaccgggtcgtcatgga
gttatgctgatagagagtactggcatcatcacatcaccaagggaggaccctcacaccatc
ctattacagcagatccctatcgctcaggttgtgttggaggcccacttcaaccagaagcct
caggcagcagtggaggcgttcatcattgtagggagtctactggtgggactcttgatcctg
gccctgctcatcttcgccctctggaaggctggtttcttcaagaggcagtttaagaaggag
atcaggagagatagctgggactatgtaccaaagaatgagaagactgagagtatatcctaa
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integrated database retrieval system