Salmo trutta (river trout): 115155679
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Entry
115155679 CDS
T08542
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115155679
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115155679
Endosome - Golgi transport
Rab GTPases and associated proteins
115155679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
115155679
NCBI-ProteinID:
XP_029558416
Ensembl:
ENSSTUG00000008672
LinkDB
All DBs
Position
20:21498602..21514193
Genome browser
AA seq
1178 aa
AA seq
DB search
MRLELMKKCACYQQQRQSALFCFRSILFFNLSFERMWLNPEEVLLKNALKLWVTEKSNDF
FILQRRRGHGDSGGKFTGLLVGALDTVLDSNARVTPFRILLQVPGSQVSWTIACGAAVED
MNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKGLIAEEVRGKQAAQEEDPEKFREVLL
KFELRFGLPSSEKLVTTYSCCCWKGRVPRHGWLYLSINHMAFYSFLLGKEVKFVIPWVEV
TRLERVSTGLMTDMVRVTTRRRQRDFSMFLSLDEAFGVMGQLADIALRRLLDSGGLELDQ
VLQQSSNITKRVLEEQALRAYVLALFRLPRAECLQEVALCSVWTPHARCHTAGTLYTTDS
YLCFASREEGHCSLLIPLSEVISIEKAESTSLLPNPVIVSVRSKKAFQLIELQDRDSLVD
SLMSRLRALQWKHSMFHSKKSLTSSSPYYTFYYDTMYCDGEEIEERPLRHTVNTEALMAY
YHHSQPGLNNSTATMEQVKERLWDDHFSAYGRGVHMFRTEKIQKLVAMGIPESLRGELWM
TFSDSSSELASHPDYYSGLVTESIGHSSLATEEIERDLHRSLPDHPAFQNVTGIAALRRV
LTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFWLLVAVCERMLPDYFNRRVIGAQVDQ
SVFEELIQERLPELAEHIPDLSPLSSLSLSWFLTLFLSVLPFRSAVCVVDCFFFHGIKAI
FQLGLAVLDANAAALCASADDGQALMILTGFLDHVKYDENPSSPALHPPSSPRGEEEGSP
TVELHTLITDLITDSYEKFGDLTVRQIERLRCRHRIQVLQAHEDITKENALRVVTPDVSL
SPENLADVYDLFKTEHFINLYWGDGSTTVALQHHDPGQPYVEQYRVDRAQFKSLYVLLVP
WLCGLHTDTVAHRTFTLLDQDSDLLITFRKFAGWLDTLYCEELNEKIRLLYRLHIPPALT
ESEDDPSPLKSPLLSTTRPLHIEMPNAPVCVHVEEEIRDYQEQLKQMLKDLAQEKNVEKP
LPLMNQREFIQFCKTLYSMFHGNPDENELFQAIATVTSLVLQIGEVGHRSRSEVSSEGGA
GDEVEEDHREGSQEDHPVFSTKEGDGARQDGTRKSSERSESSSEWTVSYAQILASLLTEQ
QLVNFFEKPLDLSAKVAVAKVKQYHERAGLLMLQQGTS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttggaactaatgaagaagtgtgcatgctatcaacagcaacgacaatctgcgtta
ttttgttttcgttccattctctttttcaatctctcctttgaaagaatgtggttgaatcca
gaggaagttttgctgaaaaacgcgctgaagctttgggttaccgaaaaatctaacgatttc
ttcattttgcagcgcagaagaggacatggggattcagggggaaaatttacaggtcttctg
gtgggagctctggacacagtgctggactccaacgcccgggtcacaccattccgtatcctg
ctacaggtgcctgggtcacaggtcagctggactatagcttgtggtgcagctgttgaggac
atgaacaggcattgggactggctggtccagaacctactccactctctctcagtgtttgag
aacaaggaggatgtcgccagcttcgtcaaagggaaagtcaagggtctgatagcagaggag
gtgagggggaagcaggcggctcaagaggaggacccagagaagttccgggaggtactgctg
aagtttgagctgcgtttcggcctgccctcctcagagaagctggtcaccacctactcctgc
tgctgctggaaggggcgtgtcccccggcatggctggctctacctcagcatcaaccacatg
gccttctattccttcctgctgggaaaggaagtgaagtttgtgatcccgtgggtggaggtg
acaaggctggagcgggtctccactggcctcatgacggacatggtgcgtgtgacaacgcgg
cggcgccagcgggacttctctatgttcctgagcctggacgaggcgttcggggtcatgggt
cagctggctgacatcgcactgcgacgcctgctggacagcggaggtctggaactggaccaa
gtcctccagcagtcctccaacatcaccaagagggttctggaggagcaggcattgagggcg
tacgtcctggctcttttccggctaccgcgggccgagtgtctccaggaggtggctctgtgt
tcagtgtggacgccccatgcccgctgccacacagccggaacgctctacaccaccgacagc
tacctatgcttcgccagtcgagaggagggccactgcagcctgctcatccccctttcagag
gtgatctccatagagaaggctgagagcaccagcctgctgcccaacccagtgatcgtcagc
gtgaggagtaagaaggccttccagctgatcgagctgcaggacagagacagcctggtcgac
agtctgatgtcacggctcagagccttgcaatggaaacactctatgttccacagcaagaaa
tctctgacgtcctcgtctccctactataccttctactatgacaccatgtactgtgacggg
gaggagatcgaggagagaccactacgtcacacagtgaacacagaggctctgatggcatac
taccaccactctcaacctggcctcaacaatagcacggctaccatggagcaggtgaaagag
cgtctgtgggatgaccacttctctgcgtatggtcgaggcgtccacatgtttcgcacagag
aagatccagaagctggttgccatgggaataccagagtcgctacggggagagctatggatg
accttctctgactcatcgtcagagttggcatcccacccagactactactcggggctggtg
acggagtctataggccacagcagcctggccacggaggagatcgagagagacctgcaccgc
tcgctgccggaccaccccgccttccagaacgtcacgggcatcgctgccctacgccgcgtc
ctcaccgcatatgcccaccgcaaccccaagattggctactgccagtcaatgaatatcctg
gcatctgtgctgctgctgtacactaaagaggaggaggccttctggctgctggtggctgtg
tgtgagagaatgctgcctgactatttcaaccgcagagtcataggtgctcaggtggaccag
tcagtgtttgaagagctgatccaggagcgtcttcccgagctggccgagcacattcccgac
ctctcccccctctcctccctctccctgtcctggttcctcaccctcttcctcagtgtgctt
cccttccgcagcgccgtctgtgtggtagactgcttcttcttccacggcatcaaagccatc
ttccagctagggctagctgtgctggatgcgaacgctgcggcgctgtgtgctagtgcagat
gacggccaggccctcatgatcctcactggctttctggaccacgtgaagtacgatgagaat
ccgtcttcacctgcccttcaccctccctcgtctccgaggggggaggaggagggcagcccg
actgtagaacttcacaccctgatcactgacctcatcactgactcctatgagaaatttgga
gacctaacggtgagacagatagagcggttgcgatgcagacaccggatccaggttctccaa
gcacacgaggacatcaccaaggagaacgcactcagggtggtgaccccagatgtctctctc
tcccctgaaaacctggctgatgtctacgacctcttcaagacagagcacttcatcaacctg
tactggggcgatgggagcaccactgtggctctccagcaccatgacccaggccagccctat
gtggagcagtacagagtggaccgggcccagttcaaaagcctgtacgtgctactggttccc
tggctgtgtggcctccacactgacaccgtggcccaccggaccttcacactgctggaccag
gacagtgacttactcatcaccttcagaaagtttgccgggtggctggacacactatactgt
gaggaactgaatgagaagatcagacttctgtatcgtttgcacatacctccagctctgact
gagagtgaggatgacccgtctccactgaagagccctctgctgtccactaccagaccactc
catatagagatgcctaatgctcctgtgtgtgttcatgttgaagaggagatcagagactat
caggagcagttgaagcagatgttgaaggacctggctcaggagaagaatgtggagaaaccg
ctacctctaatgaaccagagggagttcatccagttctgtaagaccctctacagcatgttc
catggcaacccagatgagaacgagctctttcaggccatcgctacagtgaccagcctggtg
ctgcagatcggtgaggtcggccaccgcagccggtcagaggtcagcagcgagggcggggcc
ggagacgaggtagaggaggatcacagggaggggagtcaagaagaccaccctgtcttcagc
accaaagaaggagatggagcgaggcaggacgggaccaggaagagttccgagcggtctgag
agttcgagcgagtggacggtcagctacgctcagatcctggcctcgctcctcacagaacag
cagctggtcaacttctttgagaaaccactggacctgtcagcaaaggtggctgtagcaaag
gtgaaacagtaccatgaaagggccggtctgcttatgcttcagcaaggaaccagctga
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