Salmo trutta (river trout): 115155715
Help
Entry
115155715 CDS
T08542
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115155715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
stru04050
]
115155715
Cytokine receptors [BR:
stru04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115155715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
SCIMP
Chordopox_G3
Motif
Other DBs
NCBI-GeneID:
115155715
NCBI-ProteinID:
XP_029558473
LinkDB
All DBs
Position
20:22758230..22811985
Genome browser
AA seq
487 aa
AA seq
DB search
MFQKGSQKESLFLCLLLVSCPPSLRSEYSSCGEFEFYNQTLSSCQPCPPCKPGQEPHMNC
GYGTKDEDFVCVSCPPGKYSKGKYEICRRHKDCEGLYRATVLKPGTPDNDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECLLTKAVLSGKAPSVSTSSTTMFPHPHKDPTGQ
GHLATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKND
VPDNVVIFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPN
PSPCLLNLGTKPDICLLSLGLLNRDKTGSNPTSPINANNISNSNANIINNNNYNKATGIQ
SRRKKILDLYARACNVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGL
KRDEIGGMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLS
SPRCASV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaaaggaagtcagaaagagtctctcttcctctgtttgttattggtgtcctgt
cctccctctctcaggtcagagtatagtagttgtggagagtttgagttctacaaccagacc
ctcagtagctgccagccctgcccaccatgcaaacctggacaggagccccacatgaactgt
ggctatgggactaaggatgaggactttgtgtgtgtgtcgtgtccgccggggaagtactcg
aagggaaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgtgctaca
gtactcaaacctgggacaccagacaatgatgcagactgtggaccctgcttacctgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcaaaat
gcaccgcgcaacactaaagagtgcttgcttaccaaagctgtgttgtcaggcaaagccccc
agtgtctcaaccagcagtaccaccatgttccctcaccctcacaaagaccccacaggacag
ggtcacctagcaaccgctctcatcatcgccatgtcaaccatcttcatcatggccatcgcc
attgtcctcatcatcatgttctacatcctcaaagccaagcccagcggacaggcatgctgc
tctggtcaggtggtgaaggctgtggaggctcagaccaacaaacaggaggataagaatgat
gttccagataatgttgtaattttctctgaaaaggatgaatttgacaaactcaaacctacg
cctccgaagacagtgaaaagtgagaatgatgcatcgtcagagaacgagcagctgttgagt
cgtagcatggatagtgatgaggaggcagccttggagaggcagggggcggctgatcctaac
cccagcccctgtctcctgaacctgggaaccaagccggacatctgcctgctttccctgggg
ctcctcaacagggataagactggatccaaccccaccagtcctatcaatgctaacaacatt
agcaatagcaatgcaaacatcatcaataacaacaactacaacaaggctacagggattcag
agccggaggaaaaagatcctggatctgtatgctagagcctgcaatgtggccgaaggtctg
agtcctacagaactaccatttgactgtctggagaaggccagtcgtatgctgagctcctcc
tacagtagcgaggcagccgtggtgaagacctggagacacctggcagagagctttggcctg
aagagggatgagatcggagggatgagtgacggcctgcagctgtttgagaggatcagtaca
gccggatacagcatcccagacctgctcaccagactggtgcagatagagagactggatgct
gtggagtcactatgttctgatgtactgggaggaggagacacacacactgtccctctgtcc
tcaccacgctgtgcaagcgtctga
DBGET
integrated database retrieval system
