Salmo trutta (river trout): 115155770
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Entry
115155770 CDS
T08542
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115155770 (wdr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115155770 (wdr3)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115155770 (wdr3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Utp12
DSE1_N
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_WDR41
PEP5_VPS11_N
CFAP251_N
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_DCAF4
ASA1
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
WDR54
WD40_like
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
VPS11_N
RMC1_N
Beta-prop_RIG_1st
PAC11
Motif
Other DBs
NCBI-GeneID:
115155770
NCBI-ProteinID:
XP_029558565
LinkDB
All DBs
Position
20:complement(25581577..25596443)
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AA seq
940 aa
AA seq
DB search
MGLTKQYLRYAASAVFGVIGSQKANVAFVTMRGGERGRFVAVAACEHVFIWDVRKAEKVL
ILKGNKHEVTYLCPSPDGIHVAVGYEDGAVRIFSLLNGESNVSFNGHKSAVTVIRYDTLG
SRLVTGSKDTDVIVWDVINECGLYRLKGHKDAVTQALFLKDKNLLVTSSKDSFVKWWDLD
TQHCFKTMLGHRSEVWGMALLNQESRLITGSADSELRAWDINYLEEGREAGEPKEKKGKS
LLDDDDDDDEEEVVDESPEERILSCKKAGSLLREARDRVVSMTTDAKAKVLACHGSDTVL
EVFSVLPEDEVERVMAKKLKRAKKKARDAQHAEDAPEPVVERNLANEIVRLTNIKASANI
RWVDCLMCAGGELKIAMLLQNNTVETYSLKMTDKNPTGTKTSRLTLGGHRTDARTLAFSS
DNIAILSASGDTVKVWNRSTLQVIRTMACEYALCSLFVPGDRQIILGTKCGKIQIFDLAS
GTLMETVDAHNGALWSLCLSPDQRGIVTGGTDKRVKFWEFELIMDKDAAQKRLTVKHMRT
LQLDEDVLCVKYSPDQRLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCLDISHDSAL
IATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKF
EHIQTLEGHHREVWCLAISPNGDHIVSSSHDKSLRLWERTREPIILEEEREMEREAEFEE
GMAKGDEPVVPGEIKDAEAAPAAKKTIETVKAAERVMEALELFRSESRKMEEHQIACQSA
GKQLPPPKANPILVAFGNVSPSRYVLDVIKKVRSSELEVSLLVLPFPYIPDLLSLFNCYV
QDGLEVELVCRCLFFLLRIHFGQISSNQMLLTVIDELRINTISKVREIRDVLGFNSAGLQ
FLQREVESKEEVMFFADATGLLKEKRRKRKKRERAILTIA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggggttgaccaagcagtacctgcgctatgctgccagcgccgtgttcggagtaattggg
agccagaaggccaacgtggcctttgtcaccatgcgaggaggggagagaggacgctttgtg
gctgtggctgcctgcgagcatgtcttcatatgggacgtgcgtaaagcagagaaggttctg
attctcaaggggaacaagcacgaggtgacgtacctctgcccctcccccgatggcatccat
gttgccgtgggttacgaggacggggctgtgcgcatcttcagcctattgaacggcgagagc
aacgtgtccttcaacgggcacaagtccgcagtcactgtgatccgctacgacactctcggt
tctcggctggtgaccggatccaaggacacggatgtgattgtgtgggatgtgatcaacgag
tgtggtctgtaccgactgaaaggacacaaagacgctgtcacacaggccctgttcctcaaa
gacaagaacctcctggtcaccagctccaaggacagctttgtgaagtggtgggaccttgac
acccagcactgctttaagaccatgctgggacatcgcagtgaggtgtggggcatggcactg
ctgaaccaagagagtagattgataacaggctcagccgacagtgagctccgggcctgggac
atcaactacctagaggagggcagagaggctggtgaaccgaaggagaagaaaggcaaaagc
ctacttgatgatgatgatgatgatgatgaggaggaagttgtggacgagagccctgaggag
aggatcctgagttgtaagaaagctggctctttgctgagagaggccagggacagggtggtc
tccatgactaccgatgccaaggccaaggtcctggcgtgccatggctcagacacagtgctg
gaggtgttcagtgtgctgccggaggacgaggtggagagggtgatggccaagaagctgaag
agagccaagaagaaggccagagatgcgcagcatgcagaggacgccccagagcctgtggtg
gagaggaatctggcaaatgagattgtgagactaaccaacatcaaggcctccgccaatatc
agatgggtggactgcctgatgtgtgcgggtggggagttgaagatagccatgctgctccag
aacaacacagtggagacctacagcctcaagatgactgacaagaaccccacgggcactaag
acctcacggctcaccctgggaggccaccgcaccgatgcccgcacgctggccttcagctca
gacaacatcgctatcctctccgcctccggggacaccgtcaaagtctggaacaggtctacc
ctgcaggtgattcgcaccatggcgtgtgagtacgccctctgctccctgtttgtccctgga
gacaggcagattatcctaggaaccaagtgtggtaagattcagatctttgacctggcatca
ggaacccttatggagactgtcgatgcccataacggagctctgtggtccctctgtctgtct
cctgatcagagggggatagtgactggcgggactgacaagagagtgaagttctgggagttt
gagctgattatggacaaagacgctgcacagaagaggctgacggtgaaacacatgcggaca
ctgcagctggatgaggatgtgttgtgtgtgaaatattctcctgaccagagactgttggct
gtctccctgctggactgcaccgtcaaggtcttctacacagacacactcaagttcttcttg
tctctgtatggacacaagctgcctgtgctctgcctggacatctctcatgacagcgccttg
atagcaactggctctgcagacagaaacgtcaagatctggggtctggactttggggactgt
cacagatctatgtttgcccacgatgacagcgtcatgttccttcagtttgtccccaaaacc
catctgttcttcacagcggggaaggacaagaagataaaacagtgggacgcagacaagttt
gagcacatccagaccttagagggtcaccatcgggaggtttggtgtctggccatcagtcct
aacggggaccacattgtgtcctcgtcccacgacaagtccctgaggctctgggagaggacc
agagaacccatcatcctggaggaagagagggagatggagagagaggctgagtttgaggag
ggcatggccaaaggggatgagcctgtggttccaggagagatcaaagatgcagaggcagca
ccagcggcgaagaaaaccatagagacagtcaaagctgctgagcgtgtcatggaggctctg
gagctgttcagatcagagagcaggaaaatggaggagcatcagatagcctgccagtcagct
ggaaaacagttgcctccacctaaggccaatcctatccttgtggcctttggaaacgtttct
ccgtctcgctacgtcttggacgtaataaagaaggtccggtccagtgagctggaggtgtct
ctgctggtcctgccgttcccctacattccagacctgctgtctctcttcaactgctatgtc
caggacggcctggaggtggagctagtgtgccgttgtctcttcttcctgctcagaatccac
tttggtcagatttccagtaaccagatgctgctgaccgtcatagacgagctgagaatcaac
accatctctaaagtccgagagatcagggatgttctgggattcaacagtgctggtctccag
ttcctccagagggaggtcgagagcaaagaggaggtcatgtttttcgcagacgccaccggt
ctccttaaagagaagaggaggaagaggaagaagagagagagagctattctcactattgcc
tga
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