KEGG   Salmo trutta (river trout): 115155770
Entry
115155770         CDS       T08542                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
stru  Salmo trutta (river trout)
Pathway
stru03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115155770 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:stru03009]
    115155770 (wdr3)
Ribosome biogenesis [BR:stru03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    115155770 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Utp12 DSE1_N Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_WDR41 PEP5_VPS11_N CFAP251_N Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_DCAF4 ASA1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Vps41 WDR54 WD40_like Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd VPS11_N RMC1_N Beta-prop_RIG_1st PAC11
Other DBs
NCBI-GeneID: 115155770
NCBI-ProteinID: XP_029558565
LinkDB
Position
20:complement(25581577..25596443)
AA seq 940 aa
MGLTKQYLRYAASAVFGVIGSQKANVAFVTMRGGERGRFVAVAACEHVFIWDVRKAEKVL
ILKGNKHEVTYLCPSPDGIHVAVGYEDGAVRIFSLLNGESNVSFNGHKSAVTVIRYDTLG
SRLVTGSKDTDVIVWDVINECGLYRLKGHKDAVTQALFLKDKNLLVTSSKDSFVKWWDLD
TQHCFKTMLGHRSEVWGMALLNQESRLITGSADSELRAWDINYLEEGREAGEPKEKKGKS
LLDDDDDDDEEEVVDESPEERILSCKKAGSLLREARDRVVSMTTDAKAKVLACHGSDTVL
EVFSVLPEDEVERVMAKKLKRAKKKARDAQHAEDAPEPVVERNLANEIVRLTNIKASANI
RWVDCLMCAGGELKIAMLLQNNTVETYSLKMTDKNPTGTKTSRLTLGGHRTDARTLAFSS
DNIAILSASGDTVKVWNRSTLQVIRTMACEYALCSLFVPGDRQIILGTKCGKIQIFDLAS
GTLMETVDAHNGALWSLCLSPDQRGIVTGGTDKRVKFWEFELIMDKDAAQKRLTVKHMRT
LQLDEDVLCVKYSPDQRLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCLDISHDSAL
IATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKF
EHIQTLEGHHREVWCLAISPNGDHIVSSSHDKSLRLWERTREPIILEEEREMEREAEFEE
GMAKGDEPVVPGEIKDAEAAPAAKKTIETVKAAERVMEALELFRSESRKMEEHQIACQSA
GKQLPPPKANPILVAFGNVSPSRYVLDVIKKVRSSELEVSLLVLPFPYIPDLLSLFNCYV
QDGLEVELVCRCLFFLLRIHFGQISSNQMLLTVIDELRINTISKVREIRDVLGFNSAGLQ
FLQREVESKEEVMFFADATGLLKEKRRKRKKRERAILTIA
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggggttgaccaagcagtacctgcgctatgctgccagcgccgtgttcggagtaattggg
agccagaaggccaacgtggcctttgtcaccatgcgaggaggggagagaggacgctttgtg
gctgtggctgcctgcgagcatgtcttcatatgggacgtgcgtaaagcagagaaggttctg
attctcaaggggaacaagcacgaggtgacgtacctctgcccctcccccgatggcatccat
gttgccgtgggttacgaggacggggctgtgcgcatcttcagcctattgaacggcgagagc
aacgtgtccttcaacgggcacaagtccgcagtcactgtgatccgctacgacactctcggt
tctcggctggtgaccggatccaaggacacggatgtgattgtgtgggatgtgatcaacgag
tgtggtctgtaccgactgaaaggacacaaagacgctgtcacacaggccctgttcctcaaa
gacaagaacctcctggtcaccagctccaaggacagctttgtgaagtggtgggaccttgac
acccagcactgctttaagaccatgctgggacatcgcagtgaggtgtggggcatggcactg
ctgaaccaagagagtagattgataacaggctcagccgacagtgagctccgggcctgggac
atcaactacctagaggagggcagagaggctggtgaaccgaaggagaagaaaggcaaaagc
ctacttgatgatgatgatgatgatgatgaggaggaagttgtggacgagagccctgaggag
aggatcctgagttgtaagaaagctggctctttgctgagagaggccagggacagggtggtc
tccatgactaccgatgccaaggccaaggtcctggcgtgccatggctcagacacagtgctg
gaggtgttcagtgtgctgccggaggacgaggtggagagggtgatggccaagaagctgaag
agagccaagaagaaggccagagatgcgcagcatgcagaggacgccccagagcctgtggtg
gagaggaatctggcaaatgagattgtgagactaaccaacatcaaggcctccgccaatatc
agatgggtggactgcctgatgtgtgcgggtggggagttgaagatagccatgctgctccag
aacaacacagtggagacctacagcctcaagatgactgacaagaaccccacgggcactaag
acctcacggctcaccctgggaggccaccgcaccgatgcccgcacgctggccttcagctca
gacaacatcgctatcctctccgcctccggggacaccgtcaaagtctggaacaggtctacc
ctgcaggtgattcgcaccatggcgtgtgagtacgccctctgctccctgtttgtccctgga
gacaggcagattatcctaggaaccaagtgtggtaagattcagatctttgacctggcatca
ggaacccttatggagactgtcgatgcccataacggagctctgtggtccctctgtctgtct
cctgatcagagggggatagtgactggcgggactgacaagagagtgaagttctgggagttt
gagctgattatggacaaagacgctgcacagaagaggctgacggtgaaacacatgcggaca
ctgcagctggatgaggatgtgttgtgtgtgaaatattctcctgaccagagactgttggct
gtctccctgctggactgcaccgtcaaggtcttctacacagacacactcaagttcttcttg
tctctgtatggacacaagctgcctgtgctctgcctggacatctctcatgacagcgccttg
atagcaactggctctgcagacagaaacgtcaagatctggggtctggactttggggactgt
cacagatctatgtttgcccacgatgacagcgtcatgttccttcagtttgtccccaaaacc
catctgttcttcacagcggggaaggacaagaagataaaacagtgggacgcagacaagttt
gagcacatccagaccttagagggtcaccatcgggaggtttggtgtctggccatcagtcct
aacggggaccacattgtgtcctcgtcccacgacaagtccctgaggctctgggagaggacc
agagaacccatcatcctggaggaagagagggagatggagagagaggctgagtttgaggag
ggcatggccaaaggggatgagcctgtggttccaggagagatcaaagatgcagaggcagca
ccagcggcgaagaaaaccatagagacagtcaaagctgctgagcgtgtcatggaggctctg
gagctgttcagatcagagagcaggaaaatggaggagcatcagatagcctgccagtcagct
ggaaaacagttgcctccacctaaggccaatcctatccttgtggcctttggaaacgtttct
ccgtctcgctacgtcttggacgtaataaagaaggtccggtccagtgagctggaggtgtct
ctgctggtcctgccgttcccctacattccagacctgctgtctctcttcaactgctatgtc
caggacggcctggaggtggagctagtgtgccgttgtctcttcttcctgctcagaatccac
tttggtcagatttccagtaaccagatgctgctgaccgtcatagacgagctgagaatcaac
accatctctaaagtccgagagatcagggatgttctgggattcaacagtgctggtctccag
ttcctccagagggaggtcgagagcaaagaggaggtcatgtttttcgcagacgccaccggt
ctccttaaagagaagaggaggaagaggaagaagagagagagagctattctcactattgcc
tga

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