Salmo trutta (river trout): 115155782
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Entry
115155782 CDS
T08542
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115155782
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115155782
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
115155782
NCBI-ProteinID:
XP_029558590
Ensembl:
ENSSTUG00000007008
UniProt:
A0A673X199
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Position
20:complement(26140135..26164942)
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AA seq
887 aa
AA seq
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MGLKDHLEDGTGHNLNLGLDLDYLHVEGTDRQASLSATAGTHSGVLEGEEAQVGGTHSSV
SSSSISSSSGSSSNSSEESAASDSEDERGVHHGSGSSTETPHPHPCHPAGLGLPQSPPPR
DPKLPTDPLTEYRSKMEFALKLGYSEELVLLVLRKLGPDALINDILGELVKLGTRTETEE
AGESAASQSSSSSLSSPSLDSSRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSC
HGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFTPSRRVQ
GRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKTEWKKFIDERLLMYSFVNDKFMPP
DDPLGRHGPSLENFLRKRPVIPEHRKQPCPYGKKCTYGHKCKFYHPERGSQPQRSVADEL
RASAKNSSSSSTSSSKSLGSALLVKSHSMSSSCSADGLPEPYRAAPNRRSDPGLCTPPYN
DLLEERQGGRTKAEARRGSSSSSSSSCSNSLLVPAPGGPPSSQGFSLQDWRDHNAGRNGS
CRAPGLLGLGHSESYPTFESPKLGYNSLMRAYSSLNLVVPRSPERLFPTDLRTGLLASDC
SSEGSMSSDSFSPDPLLEDGLKCHHSHHHHHHCSSRYPHHTNHPPPGLTLHPHGGSHHSY
PLAQSMGRPQVFSLEDHPSSLHHFKAHLTYLPPHLQHPSVGSSSGCSEDYPPQPPPQTSS
PHCHSHSSTLGHNLGGSTWQDNNSLQNTWLYEHSPVRPRRTYPGMGQEQRLASWEPHYQQ
LLQPCYEAFNFQSQPEGHEQPWHSSWPRDTHSPHPQPPSSSHPSPHSSMDPQHQGGTCQD
VRDKVFVNLCNIFPPELVKVVMERNPHVMDAQQLAAAILAEKSQARY
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaacaggccacaacctcaatctggggctggat
ttggactacctccatgtggaaggcaccgaccgccaggccagcttgagtgccacagccggc
acccactcgggagttttggagggggaagaggcacaggtgggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagtggtagtagtagtaactcctctgaagaaagtgct
gcgtcggacagcgaagatgagcggggggtccaccatggatctggttctagcactgagacc
ccccatccgcacccctgtcaccctgctggactgggcctgccacaaagccccccccctagg
gaccccaaactccccaccgaccccctcacagagtatcgctccaagatggaatttgccctg
aagctgggctactctgaggagctggttttgctggtgctaaggaagctagggcctgacgcc
ctcatcaacgacatactgggagaactggtcaaactaggcaccaggacagagacggaggag
gcaggggagtctgccgcctcccagtcgtcatcctcctccttatcctccccctctctggac
tcctccagactggactgctcctcccagctgctgttggatgacaaggagaacatcaggcct
gtggtggtggatgggagtaatgtagccatgagtcatgggaataaggaagtgttctcctgt
cacggcatccagctggctgttgattggttcctggagcgtggtcaccgtgacatcactgtg
tttgtgcccgcctggagaaaggaacagtcaagaccggacgccctcatcacagaccaggag
atattgcggcgtctggagaaagacaagatcctggtgttcactccgtctcgtcgggtccag
ggccgccgtgtggtctgctatgacgaccgcttcatcgtcaagctggcctacgagtccgac
ggcatcattgtctctaacgacaactaccgggacctggccaatgagaagacagagtggaag
aagttcattgacgagcggctgctcatgtactctttcgtcaatgacaagttcatgccgcct
gatgatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagtg
atcccagaacacaggaagcagccctgcccctatgggaagaagtgcacttacggccacaag
tgtaaattctaccaccctgagagaggcagtcagccccagcgctctgtggccgacgagctg
cgtgccagtgccaagaactcctcttcctcctccacctcttcctccaagagcctgggctct
gctctgctggtgaagagccacagcatgtccagcagctgcagtgcagacgggctcccagaa
ccctaccgagccgccccaaacaggcggtcggaccccggcctgtgcacccccccctacaac
gacctcctggaggagcggcagggcgggaggaccaaagcagaggcccgcagaggtagtagc
agcagcagtagcagcagctgtagtaacagcctcctggtccctgcccctgggggtcctcct
tccagccaaggcttctctctgcaggattggagggaccacaacgcagggaggaacggctcc
tgcagagctccagggctgttggggcttggtcactctgagtcatatcccacctttgagtcc
ccaaagctgggctacaactccctaatgagggcgtactccagcctaaacttggtggtgcca
cggagccccgagcggctgttcccaactgacctacggacgggcttgctggcatctgactgc
agcagcgagggcagcatgagctctgactccttctcccctgaccccctgctggaggatggc
ctcaaatgccaccactcccatcaccaccaccatcactgctccagccgctacccacaccac
accaaccacccgccccctggtctgaccctgcacccacatggaggctcccaccatagctac
cccctagctcagagcatggggaggccacaggttttcagcttggaggatcatccctcctcc
cttcaccacttcaaggcccatctcacctaccttcctccccatcttcagcacccatctgtg
gggagcagctctggctgttctgaggactaccctccccaacctccaccccagacctccagc
ccccactgccactctcacagctcaactctggggcataacctggggggctccacctggcag
gacaacaacagcctccagaacacctggctctacgagcactcccctgtccgccccaggagg
acctaccctgggatgggacaggagcagcggctggccagctgggaaccccactaccagcag
ctcctccagccctgctacgaggccttcaacttccagtcccagcctgagggccacgaacaa
ccctggcactcttcctggcccagggacacacactcgccccatcctcaacccccttcctcc
tcccatccttcaccccactcctccatggacccccagcaccaggggggaacatgtcaggat
gtgagggataaggtgtttgtcaacctatgtaacatctttcctccagagctagtgaaggtg
gtgatggagaggaacccccacgtgatggacgcccagcagctggctgcagctatcctggct
gagaagtcccaggctcgctactga
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