Salmo trutta (river trout): 115155862
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Entry
115155862 CDS
T08542
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115155862 (aff3)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115155862 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
115155862
NCBI-ProteinID:
XP_029558716
Ensembl:
ENSSTUG00000008597
LinkDB
All DBs
Position
20:31555487..31592695
Genome browser
AA seq
1187 aa
AA seq
DB search
MTHPHLVPHKSMLADDLKLSSDDDDADKGPEQSALWVGNNSLSEHHTHTHGGRVRHSSSD
SSGSDSYSELEEESSSQRSLSPSPETHSDPGTPTDAQALGCTKEIYHPSTTQWQLDKWLK
KVPKESSSCDQDPSNHDHTQRATEHRSLSPDPQRAPSPSRPWGIREDYSPSQSLVSSPRF
NYSPRHSPRPSPGYSPCPSPSPCSSPCPSPTPRHSPIPSPVPSVCPSPFPSPRATCSLSS
IPQHPPRSPSPSLTHSSPRHYPQVRSPHQESLRPPTWPSLTTSPSHRPKIRPWIAPVPST
EHKSKPRHSPYPQPPPQHSSRPTSTQSQPVPTPKTTAKAAPALSAELSHRHKHRSRPSPN
SNPKLHSQPSLKHACTLAPKSQHLSISGQRPKESSRHSHNSNSNPRPSNGPSLTTRLSTS
LSPTSRAKHLPTTDPSRETSSRVGHCSKSSPKPHSLPNSKASSEPRAKSSPSPRPKVKSW
APAPHSKLPQRKPQSREREQEVDNRRETHAPKRKVDRQTGGKGEHEVERQTEKQGERQGK
KQKERKGERQGERRLAEEQLLRHPWVQSSEEEEEEDVEERKRRREEREKEEKRKRRWKEQ
QQQRGEWQAVQPKQRPHTNSERRHHPIDPQRHRHGTKKKRRRKSEEEEERQSQPDPSPPP
SPSSPTPVVLPTDSSSSSESDSEPDLPPNVSKVPADSTSSQRPIPRRGYQGPGRPADSRP
RVLYPRRTTTSNPGQGQQIQGKQKLYTLVPFGRRELAAASHRGLRNLVVQIDLSLLNRVP
DTTTGTPASHKHSSSSSASVKQKEAMRHLCIPETERGDSKRKRKSENGVQHHRESKRSNS
QTNGPSAHTESTTHRRLDAHSDTRHNGFLEDYLGSKRPMSPLSDTPDPTKPPIKTQNPEP
KMEVECCVGVSGQPQPECEPWGPPLQRAGGQRGTVTNHEPPHHAEYYMHEAKRMKHRADA
MVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMKLKNHSGPGA
RQEDQQLAVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSPKVPTTPPIWSDSGKG
TGGPPSSLSPSPSALTLGSHTGSSPSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVAD
SLARDNKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccctcacctggtgcctcacaaatccatgctcgctgatgacttgaagctcagc
agtgacgatgatgatgctgacaagggccctgaacagtcagccctctgggttggtaacaac
agtctgtcggagcaccacacacacacacatggtgggagggtgagacattccagctcagac
tcttcaggctcagactcctacagtgaattggaggaggagagcagtagccagcgctccctt
agcccaagcccagaaacacactccgatcctgggacacccaccgacgctcaggcccttggc
tgcaccaaggagatatatcacccctccaccactcagtggcagctggataagtggctgaaa
aaagtccccaaagaatcgtcttcctgcgaccaggatcccagcaatcacgaccacacccag
agagctacagagcaccggtcgctctccccagacccccaaagagccccatctccatccaga
ccctgggggatccgagaggactacagccccagccagagccttgtttccagcccgcgcttc
aactacagccctaggcatagccctcggcctagccctggctacagcccctgccccagcccc
agcccctgttccagtccttgtcctagccccaccccaagacacagccccattcctagcccg
gtccccagtgtctgtccgagccccttcccaagccccagagccacctgcagccttagttcc
attccccagcacccccctaggagtcctagtcctagccttactcattctagcccccgccac
tatcctcaggttcggagtcctcatcaggaaagcctcaggcctcccacgtggcctagccta
acaaccagcccgagccatagacctaaaatcaggccgtggattgcccctgtacccagcact
gagcacaagagcaagccaagacacagtccatatcctcagcctccgcctcagcacagctcg
aggcctacatccacacagagccagcctgttcccactcccaagaccacagccaaggcagcc
cctgctctgagcgctgagctgagccacaggcacaaacacagatccaggcctagtcccaac
tcgaatcccaagcttcattctcagcctagcttgaaacacgcatgcactctagcccccaaa
agccaacacctatcaatctctggacaaaggcccaaggagagtagcagacacagccataat
tccaactccaaccccaggcccagtaatgggcctagtttgacaaccagactcagtaccagt
ctcagtcccacatccagggccaagcacttacccaccacagaccctagcagagagaccagc
agcagagttggtcactgttccaaatccagcccaaagccacattctctgcctaactccaaa
gctagttctgagcctcgcgctaaatccagccccagccctagacccaaagtcaagtcctgg
gcccctgctccccactcaaagcttccacagaggaaaccccaatccagggagagagaacag
gaggtggacaaccggagagaaacccatgcaccaaagaggaaggtagacaggcagacaggg
ggaaagggggaacatgaggtagagagacagacagaaaaacaaggagagaggcaggggaag
aaacagaaggaaagaaagggggagagacagggagagagaagactggcggaggagcagttg
cttagacacccctgggtccagagctcagaggaagaggaggaagaggacgtagaggagaga
aagaggagaagggaggagagagagaaggaggagaagcgcaagaggaggtggaaggagcag
cagcagcagagaggtgaatggcaagcggtccagcccaagcagagacctcacaccaacagt
gagcgccgccaccatcccatcgacccacaacgccaccgccacgggaccaagaaaaagagg
aggaggaagagtgaggaggaggaagagagacagtctcagccggacccttcccctccaccg
tcaccctcctcccccactcctgtcgtcctacccacggactcctcatcctcttcagagtcc
gactcggagcccgatctgcctcccaacgtctccaaagtcccggctgactccacatcaagc
cagcgtcccatccccaggagagggtaccagggcccggggaggcccgcggatagcaggccc
agagtgctctaccccaggcgcaccaccacatccaacccaggccaggggcagcaaatccag
gggaagcagaaactctacaccctggtcccgtttggacgtcgtgagctggccgcagcctcc
catcgaggcctgagaaacttggtggtgcagatagacctctccctgctcaacagagtgcct
gatactacgacaggcaccccagcctctcacaaacactcttcctcctcctctgcctctgtc
aagcagaaagaagccatgagacacctgtgcatccccgagacagagagaggagacagcaag
aggaaacgcaagtcagagaatggagtccagcaccacagagagagtaagaggagcaactcc
cagaccaacggcccctctgcccacacagagtctacaacacacagacgtctagacgctcac
tcagacaccagacacaacgggttcttggaggactatctgggcagtaagaggccaatgtcc
cctctctctgacacccctgaccctaccaagccccccatcaaaacacagaacccagagcct
aagatggaggttgagtgttgtgttggggtatcagggcagcctcagcccgagtgtgaacca
tggggacctcctttacaacgggcagggggacagagaggaaccgtaaccaaccatgaaccc
ccacatcatgctgagtactacatgcatgaagccaagaggatgaagcaccgtgcagatgcc
atggtggataagctggggaaggcagtgaactatgtggatgctgctctctccttcatggag
tgtggaaaagctatggaggagggaccactggaggccaagtccccctataccatgtacgca
gagacagtagagcttatcaggtacgccatgaagctgaagaaccactctggcccaggggcc
agacaggaagaccaacagttggccgtactgtgtttccggtgccttgctctcctatactgg
cagatgtttcgtttaaagaaggatcacgccctgaagtattccaaagctttattggactac
tttaagagttctccaaaagtgcctactactcccccaatctggagcgactcgggaaagggc
acagggggacctccctcgtccctctcccccagcccctcagccctcaccctgggctctcac
actggcagctccccctcctccctcatcagcattccccaacgtatccaccagatggcagca
aaccacctcaacatcaccaacagtgtcctctacagctatgagtactgggaggtagcagat
agccttgccagagacaacaaggagttctttaactacttgaacaccctgtcggggccgttg
accctccacagtagtattgctcatgcagtccagtacaccagacaggctctacagtggata
cgcatcagtgccaatgtgggttag
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