Salmo trutta (river trout): 115155960
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Entry
115155960 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115155960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115155960
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115155960
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115155960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115155960
NCBI-ProteinID:
XP_029558948
Ensembl:
ENSSTUG00000008921
UniProt:
A0A673XH92
LinkDB
All DBs
Position
20:36168770..36231961
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPNEPVQSISAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAALDSKAMTSPSERVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPMPDCHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPDCYLSERSEQEEAYQ
VISTQALDSNLSNLIKRNNELETLMGKLIQTCQHVECNASRQENKLLEECDLLIDIIQQR
RQMIATKIKEGKAIRLRKLAQQIASCKQIIERSSSLITQADHTLKETDHARFLQTAKNIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPIIRAELCTASN
DTITVHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYMFIVKAINQAGSRSSEPWKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETLSKKS
HTQDRFTSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWIGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDIAFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCRD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggacccg
ttgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgcatcctagtctcc
cactgcacccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgtcatcaccctcagccagaggggcctagaaggactgaagcgtaacgtcactctgcag
aacatcattgaccgctttcagaaggcttccgtgagcgggcccaactcccccagtgagact
cgccgcgagcgggccgccctagacagcaaggccatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaggaccctccccaagatgccgtcaagacctgtgtcacctgcgag
gtgtcctactgcgacgagtgcctgaaggccacccaccccaataagaagcccttcactggc
caccgtctgatcgagcccatgccggactgccacctcaggggactcatgtgcctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagcagcactcagcgaccgctacgagaaa
ctgaagagaactccagactgctatctcagtgagaggagtgaacaggaggaagcataccag
gtgatatctacgcaagccttggactctaacctcagcaatctaatcaagaggaacaatgag
ttggaaactctgatgggcaagttgattcagacttgccaacatgtggagtgtaatgcatca
agacaagagaacaagctccttgaagaatgtgacctcttgatcgacatcatacagcagaga
aggcagatgatagccaccaagataaaggagggcaaggctatacggctgcgaaagctagcc
cagcagatcgccagctgcaagcagatcattgagagatcgtcgtccctcatcactcaggct
gatcacaccctcaaggagacagaccatgcccgcttcctgcaaacagccaaaaacatctgt
gaaagagtgtccatggcaacagcatcctctcagatcctgataccagagatcaacctaaat
gacacctttgatacgtttgcgttggacttcacaagggaaaagaaaatgctggaaagcttg
gattacctcacagcaccaaatcccccaataatccgggcggaattatgtacggcatcgaac
gacaccatcactgttcactggacgtctgatgatgagttctgtgtcgtctcctatgagctt
cagtatgccatcttcaccggacaagccaatgttgtcagtttgtgtaactcggctgatagc
tggatgattgtgcccaacatcaagcagaaccactacacggtgcatggactccagtgtggc
accaagtacatgttcatcgtcaaggccatcaatcaggcagggagtcgcagcagtgagcct
tggaaactcaagaccaacagtcaaccattcaagttggacccaaagtctgctcacaagaag
ctgaaggtctcccatgacaacctgacagtggagcgagacgagacgttgtccaagaagagc
cacactcaggaccgcttcaccagccagggcagctacggcgtcacagggaatgtgtacatc
gacagcgggcgccactactgggaagccttgataggagggagcacatggtttgctgtgggc
attgcttacaagtcagcaccgaaacatgagtggatcggcaagaactctgcctcgtgggta
ctgtctcgctgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgaa
ccgtccccccacctgcgtcgtgttggggtgttgctggactacgatgctggctccctggcc
ttctacgatggcgccggctcacagcacctgtacacattcgacatcgccttcgctcagcca
gtctgtcccgtgttcaacgtgtggaacaagtgtctgaccgtcctcacagggctgccaatc
ccagaccacctagagggaacagactgtcgggattaa
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