Salmo trutta (river trout): 115155997
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Entry
115155997 CDS
T08542
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115155997
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115155997
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115155997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
PEP5_VPS11_N
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115155997
NCBI-ProteinID:
XP_029559017
Ensembl:
ENSSTUG00000011630
LinkDB
All DBs
Position
20:complement(38177617..38502643)
Genome browser
AA seq
1176 aa
AA seq
DB search
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTAHAPTPQDIHVQETLVSENFQICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAVTVLEMDHPIVEFLVLCDT
PYSNEIQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDII
PILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQML
YKLKTSKVFEKPKAGEGRAGELVEEDPYAVQMVSWCPHSRLFCVVGISAHVILYRFSKHD
ANTQIMSLEVRLQFDSEDVISPSEAENNPCFSDPSSHSPQPPGSPGSGTQDSLPCLKVKN
RPVRMPPGYQAELVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILM
CMGTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDN
QVSMDMERSKSPTSDHVNGHCTSPTSQPCSVGKPRITGVPEGPRLTRRGPGRPPFRKAQS
AACMEISLPVSSHTEESRENSFSRSRSSSVSSIDRDTKESVTTLQFGESYGRKGDALPTA
CLWVGTSLGVVLLLPISIPTEEEERMEEPITMGPSGTVLMLKGSVLRFAFLDCGGALIQS
PYEVWRDPNGPEDPDRPRRRKLVNFSPSSSQEACSDGHLAVVCSEKQAKVILMPTQAVLF
THNITESSFLLRADVVSVCNSVCLACFCANGHIMTLSLPSLRPLMDINYLPLTDLRIART
FVFTNGGQALYLSSPTEIQRLTYSQEMTDNLQDMLGELFTPIETPEAQNKGFLKGFFGGN
AQTFDREELFGEAAAGKASRSLAQHIPGPMGLENMKAAAGGVVGDLARARIALDQRGERL
GELEERTALMMNSAETFSTHAHQVMLKQKDKKWYQL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgtcgcg
tccccgtcgtgcggcagtgcagctggtaccccgaccgctcatgcgcccactccccaggat
atccacgtccaggagacgctagtctcggaaaactttcagatatgcaagacggtgcgccat
ggcttcccataccagcccacctgcctggcctttgatccagtccagaagatcctggccatc
ggctccagaacaggaggcatacggatcctgggacggcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagacgacacgctacacctgtggaaccttcgccagagacgcccagccatt
ctgcactcgcttaaattcaacagggagaggatcactttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaattagcaactaaagcacat
ccagggcccgtggtccatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccaatgggacctccgagccaagaaggttgacttcagaatc
tactacgatgaggctatccattctgtgagctggcatcatgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcag
atcacctaccctcatgggaagatactgaaggacgggaggaaagagtcgtgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagcagtgagccctatgtcatcttctctggg
ggtctgtcatatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaag
gccgtcacagtgctggagatggaccaccctatcgtagagttcctagtactctgtgatacc
ccatactccaatgagatccaggatccttatgcggtggttgtgcttttagaaaaggacttc
atcgtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggac
atccacgagtctcctgtcacctgtacggcttacttcgctgaatgccctcctgacatcatc
cccatcctctactccataggggccaagcagaagaagactggctacagccacaaggagtgg
ccagtgagtggtggcacatggacactaggttcacagacctacccagagatcatcgtcaca
ggacacgcagatggaaccgtaaagttttgggacgcctctgctattacactgcagatgctg
tacaagctgaagacgtccaaagtgtttgagaagcccaaggcgggagagggtcgggcgggc
gagctggtagaggaggacccctacgccgttcagatggtcagctggtgcccacatagccgt
ctcttctgtgtggtgggcatttctgcccacgtcatcctctaccggttcagcaaacacgac
gccaacacgcagataatgtcactagaggtgcgtctgcagtttgattcggaggacgtcatt
tccccgtcagaggcagagaacaacccgtgtttctcggaccccagctcccactccccccag
ccgcccggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagaat
cgtccagtgcggatgcccccggggtaccaggctgagttggtggtgcagctgcagtgggtg
gatggagagcccccccagcagatcaccagcctggacatcaactctgcctacggcctccta
gcgtttgggaactgtaatggtctcacggtggtggacttccttcagaagacgatcctgatg
tgtatgggcacgctggacctgtatggagccgcggacccctaccaacgactcacacgctcc
ccacgtaagaacagacagtccacctcagacttttgcatgcgtggcctgtctcacttttat
tcagattcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataac
caggtatccatggacatggagagaagcaagtcacccacctcagatcatgtcaatggacat
tgcactagtcccacctcccagccctgctccgtggggaagcctcgcatcacaggggttccc
gagggcccgcggctcacccggagagggcctggccgaccgcccttccgcaaggcccagtcc
gccgcttgcatggagatctctttgcctgtttcctcccacacagaagaaagtagagagaac
tcgttcagtcgctcgcggagctccagtgtgtccagcatcgatcgcgacaccaaggagtca
gtgaccacgctgcagttcggagagtcctacggccgtaagggcgatgctctgcctaccgcc
tgcctgtgggtgggcaccagcctgggcgtggtcctgctcctgcccatatccatccccaca
gaagaggaggagaggatggaggagcccatcaccatggggcccagtggtaccgtcctgatg
ctaaaaggctctgtgttgcgatttgccttcctggactgtgggggcgctctcattcagagt
ccctacgaggtgtggcgggaccccaacggtcccgaggaccccgaccggccccgcaggcgc
aagctggtcaacttctccccgtcatcatcccaggaggcgtgcagtgacggtcacctggcc
gttgtgtgctctgagaagcaggccaaggtcatcctcatgcccacccaggctgtcctgttc
acccacaacatcaccgagtcctccttcctcctgcgggctgacgttgtctccgtctgcaac
agcgtctgcctggcctgcttctgcgccaacggacacatcatgaccctaagtttgcccagt
ctaagacccctgatggatatcaactaccttcccctgaccgacttgcgtatcgcccggacc
tttgttttcactaacggaggccaggccctgtatctgagctctcctacagagatacagcgc
ctcacatacagccaggagatgacggacaacctacaggacatgctgggggagctgttcact
cctatagaaacaccagaggcccagaacaaaggattcctcaagggcttcttcgggggcaat
gcccagaccttcgacagagaggagctgtttggggaggcagcagcgggtaaggcctctcgg
agtttggcccagcacatccctggtccaatgggattggagaacatgaaggctgcagccggc
ggcgtcgtgggggacctggcccgagcccgcatcgccctggaccagagaggagagaggctg
ggcgagctggaggaacgcaccgccctcatgatgaacagcgccgagaccttctccacacac
gcccaccaggtgatgctgaaacaaaaggacaagaaatggtatcagctttaa
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